RNA–Protein interactions for RNA: ENST00000428659.1

TIMM9P3-201, Transcript of TIMM9 pseudogene 3, humanhuman

BASIC

Gene TIMM9P3, Length 274 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TIMM9P3-201ENST00000428659 ROBO2Q9HCK4 1378 aa5.94□□□□□ -1.46
TIMM9P3-201ENST00000428659 EFEMP2O95967 443 aa5.94□□□□□ -1.46
TIMM9P3-201ENST00000428659 ZNF76P36508 570 aa5.94□□□□□ -1.46
TIMM9P3-201ENST00000428659 TNNI2P48788 182 aa5.94□□□□□ -1.46
TIMM9P3-201ENST00000428659 APOBRQ0VD83 1088 aa5.94□□□□□ -1.46
TIMM9P3-201ENST00000428659 ZNF746Q6NUN9 644 aaPredicted RBP5.94□□□□□ -1.46
TIMM9P3-201ENST00000428659 TMC3Q7Z5M5 1100 aa5.94□□□□□ -1.46
TIMM9P3-201ENST00000428659 TSPYL5Q86VY4 417 aaPredicted RBP5.94□□□□□ -1.46
TIMM9P3-201ENST00000428659 METTL16Q86W50 562 aaKnown RBP5.94□□□□□ -1.46
TIMM9P3-201ENST00000428659 TMEM192Q8IY95 271 aa5.94□□□□□ -1.46
TIMM9P3-201ENST00000428659 PHACTR4Q8IZ21 702 aa5.94□□□□□ -1.46
TIMM9P3-201ENST00000428659 PIWIL2Q8TC59 973 aaKnown RBP5.94□□□□□ -1.46
TIMM9P3-201ENST00000428659 RNF141Q8WVD5 230 aa5.94□□□□□ -1.46
TIMM9P3-201ENST00000428659 NKD1Q969G9 470 aa5.94□□□□□ -1.46
TIMM9P3-201ENST00000428659 SPON2Q9BUD6 331 aa5.94□□□□□ -1.46
TIMM9P3-201ENST00000428659 NT5C1AQ9BXI3 368 aa5.94□□□□□ -1.46
TIMM9P3-201ENST00000428659 CNNM2Q9H8M5 875 aa5.94□□□□□ -1.46
TIMM9P3-201ENST00000428659 FAM86C2PA6NEL3 165 aa5.93□□□□□ -1.46
TIMM9P3-201ENST00000428659 ACRP10323 421 aa5.93□□□□□ -1.46
TIMM9P3-201ENST00000428659 MCM4P33991 863 aa5.93□□□□□ -1.46
TIMM9P3-201ENST00000428659 TXKP42681 527 aa5.93□□□□□ -1.46
TIMM9P3-201ENST00000428659 TIGD5Q53EQ6 642 aa5.93□□□□□ -1.46
TIMM9P3-201ENST00000428659 CDCP2Q5VXM1 449 aa5.93□□□□□ -1.46
TIMM9P3-201ENST00000428659 TTC6Q86TZ1 520 aa5.93□□□□□ -1.46
TIMM9P3-201ENST00000428659 ALPK1Q96QP1 1244 aa5.93□□□□□ -1.46
TIMM9P3-201ENST00000428659 SLC9A7Q96T83 725 aa5.93□□□□□ -1.46
TIMM9P3-201ENST00000428659 PCDHA11Q9Y5I1 949 aa5.93□□□□□ -1.46
TIMM9P3-201ENST00000428659 C8AP07357 584 aa5.92□□□□□ -1.46
TIMM9P3-201ENST00000428659 GBP1P32455 592 aa5.92□□□□□ -1.46
TIMM9P3-201ENST00000428659 GDNFP39905 211 aa5.92□□□□□ -1.46
TIMM9P3-201ENST00000428659 HK2P52789 917 aa5.92□□□□□ -1.46
TIMM9P3-201ENST00000428659 ZNF124Q15973 351 aa5.92□□□□□ -1.46
TIMM9P3-201ENST00000428659 NBPF12Q5TAG4 269 aaPredicted RBP5.92□□□□□ -1.46
TIMM9P3-201ENST00000428659 ZPBP2Q6X784 338 aa5.92□□□□□ -1.46
TIMM9P3-201ENST00000428659 RUFY4Q6ZNE9 571 aa5.92□□□□□ -1.46
TIMM9P3-201ENST00000428659 USP48Q86UV5 1035 aa5.92□□□□□ -1.46
TIMM9P3-201ENST00000428659 KIAA0825Q8IV33 1275 aa5.92□□□□□ -1.46
TIMM9P3-201ENST00000428659 RGS22Q8NE09 1264 aa5.92□□□□□ -1.46
TIMM9P3-201ENST00000428659 C19orf44Q9H6X5 657 aa5.92□□□□□ -1.46
TIMM9P3-201ENST00000428659 GMIPQ9P107 970 aa5.92□□□□□ -1.46
TIMM9P3-201ENST00000428659 DDX41Q9UJV9 622 aaKnown RBP5.92□□□□□ -1.46
TIMM9P3-201ENST00000428659 NME1P15531 152 aaKnown RBP5.91□□□□□ -1.46
TIMM9P3-201ENST00000428659 RAG1P15918 1043 aa5.91□□□□□ -1.46
TIMM9P3-201ENST00000428659 GALK1P51570 392 aa5.91□□□□□ -1.46
TIMM9P3-201ENST00000428659 EGR3Q06889 387 aa5.91□□□□□ -1.46
TIMM9P3-201ENST00000428659 MESP2Q0VG99 397 aa5.91□□□□□ -1.46
TIMM9P3-201ENST00000428659 PRR23BQ6ZRT6 265 aa5.91□□□□□ -1.46
TIMM9P3-201ENST00000428659 ZSWIM9Q86XI8 627 aa5.91□□□□□ -1.46
TIMM9P3-201ENST00000428659 USHBP1Q8N6Y0 703 aa5.91□□□□□ -1.46
TIMM9P3-201ENST00000428659 POU5F2Q8N7G0 328 aa5.91□□□□□ -1.46
TIMM9P3-201ENST00000428659 COX4I2Q96KJ9 171 aa5.91□□□□□ -1.46
TIMM9P3-201ENST00000428659 DUSP13Q9UII6 198 aa5.91□□□□□ -1.46
TIMM9P3-201ENST00000428659 PPT2Q9UMR5 302 aa5.91□□□□□ -1.46
TIMM9P3-201ENST00000428659 BIN1O00499 593 aa5.9□□□□□ -1.46
TIMM9P3-201ENST00000428659 ZGLP1P0C6A0 271 aa5.9□□□□□ -1.46
TIMM9P3-201ENST00000428659 HDLBPQ00341 1268 aaKnown RBP5.9□□□□□ -1.46
TIMM9P3-201ENST00000428659 TEKQ02763 1124 aa5.9□□□□□ -1.46
TIMM9P3-201ENST00000428659 ZYXQ15942 572 aaKnown RBP5.9□□□□□ -1.46
TIMM9P3-201ENST00000428659 NBPF9Q3BBW0 867 aa5.9□□□□□ -1.46
TIMM9P3-201ENST00000428659 NLRC3Q7RTR2 1065 aa5.9□□□□□ -1.46
TIMM9P3-201ENST00000428659 TMPRSS7Q7RTY8 843 aa5.9□□□□□ -1.46
TIMM9P3-201ENST00000428659 REXO1Q8N1G1 1221 aaKnown RBP5.9□□□□□ -1.46
TIMM9P3-201ENST00000428659 RNF34Q969K3 372 aa5.9□□□□□ -1.46
TIMM9P3-201ENST00000428659 PRDM14Q9GZV8 571 aa5.9□□□□□ -1.46
TIMM9P3-201ENST00000428659 ZNF281Q9Y2X9 895 aa5.9□□□□□ -1.46
TIMM9P3-201ENST00000428659 NOTOA8MTQ0 251 aa5.89□□□□□ -1.47
TIMM9P3-201ENST00000428659 C9IYK1 514 aa5.89□□□□□ -1.47
TIMM9P3-201ENST00000428659 KCNMB1Q16558 191 aa5.89□□□□□ -1.47
TIMM9P3-201ENST00000428659 MLANAQ16655 118 aa5.89□□□□□ -1.47
TIMM9P3-201ENST00000428659 TMEM40Q8WWA1 233 aa5.89□□□□□ -1.47
TIMM9P3-201ENST00000428659 ZNF428Q96B54 188 aa5.89□□□□□ -1.47
TIMM9P3-201ENST00000428659 MRRFQ96E11 262 aaKnown RBP5.89□□□□□ -1.47
TIMM9P3-201ENST00000428659 KIRREL1Q96J84 757 aa5.89□□□□□ -1.47
TIMM9P3-201ENST00000428659 G6PC3Q9BUM1 346 aa5.89□□□□□ -1.47
TIMM9P3-201ENST00000428659 ASPNQ9BXN1 380 aa5.89□□□□□ -1.47
TIMM9P3-201ENST00000428659 HDAC8Q9BY41 377 aa5.89□□□□□ -1.47
TIMM9P3-201ENST00000428659 GPATCH2Q9NW75 528 aa5.89□□□□□ -1.47
TIMM9P3-201ENST00000428659 MEIS3P2A8K0S8 358 aa5.88□□□□□ -1.47
TIMM9P3-201ENST00000428659 TNFRSF10CO14798 259 aa5.88□□□□□ -1.47
TIMM9P3-201ENST00000428659 KRT1P04264 644 aa5.88□□□□□ -1.47
TIMM9P3-201ENST00000428659 AFMP43652 599 aa5.88□□□□□ -1.47
TIMM9P3-201ENST00000428659 CEBPAP49715 358 aaPredicted RBP5.88□□□□□ -1.47
TIMM9P3-201ENST00000428659 ZNF165P49910 485 aa5.88□□□□□ -1.47
TIMM9P3-201ENST00000428659 PAK2Q13177 524 aa5.88□□□□□ -1.47
TIMM9P3-201ENST00000428659 CCDC81Q6ZN84 652 aa5.88□□□□□ -1.47
TIMM9P3-201ENST00000428659 SLC6A18Q96N87 628 aa5.88□□□□□ -1.47
TIMM9P3-201ENST00000428659 METTL5Q9NRN9 209 aaKnown RBP5.88□□□□□ -1.47
TIMM9P3-201ENST00000428659 GINM1Q9NU53 330 aa5.88□□□□□ -1.47
TIMM9P3-201ENST00000428659 TMEM59LQ9UK28 342 aa5.88□□□□□ -1.47
TIMM9P3-201ENST00000428659 KCNH3Q9ULD8 1083 aa5.88□□□□□ -1.47
TIMM9P3-201ENST00000428659 LRRC10BA6NIK2 292 aa5.87□□□□□ -1.47
TIMM9P3-201ENST00000428659 SHOXO15266 292 aa5.87□□□□□ -1.47
TIMM9P3-201ENST00000428659 HPXP02790 462 aa5.87□□□□□ -1.47
TIMM9P3-201ENST00000428659 GLI1P08151 1106 aa5.87□□□□□ -1.47
TIMM9P3-201ENST00000428659 VAMP1P23763 118 aa5.87□□□□□ -1.47
TIMM9P3-201ENST00000428659 NMIQ13287 307 aaPredicted RBP5.87□□□□□ -1.47
TIMM9P3-201ENST00000428659 KIR3DS1Q14943 382 aa5.87□□□□□ -1.47
TIMM9P3-201ENST00000428659 PPFIBP1Q86W92 1011 aa5.87□□□□□ -1.47
TIMM9P3-201ENST00000428659 SHISA4Q96DD7 197 aa5.87□□□□□ -1.47
TIMM9P3-201ENST00000428659 TCTN2Q96GX1 697 aa5.87□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms