RNA–Protein interactions for RNA: ENST00000428404.5

TRIM39-207, Transcript of tripartite motif containing 39, humanhuman

TSL 2

Gene TRIM39, Length 427 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-207ENST00000428404 GRM4Q14833 912 aa14.59□□□□□ -0.07
TRIM39-207ENST00000428404 RTN1Q16799 776 aa14.59□□□□□ -0.07
TRIM39-207ENST00000428404 LDLRAD1Q5T700 205 aa14.59□□□□□ -0.07
TRIM39-207ENST00000428404 LRRC47Q8N1G4 583 aaKnown RBP14.59□□□□□ -0.07
TRIM39-207ENST00000428404 GMCL1P1Q8NEA9 526 aa14.59□□□□□ -0.07
TRIM39-207ENST00000428404 SMARCC2Q8TAQ2 1214 aa14.59□□□□□ -0.07
TRIM39-207ENST00000428404 ACER1Q8TDN7 264 aa14.59□□□□□ -0.07
TRIM39-207ENST00000428404 NUP133Q8WUM0 1156 aa14.59□□□□□ -0.07
TRIM39-207ENST00000428404 WDR18Q9BV38 432 aa14.59□□□□□ -0.07
TRIM39-207ENST00000428404 GPBP1L1Q9HC44 474 aaPredicted RBP14.59□□□□□ -0.07
TRIM39-207ENST00000428404 FRMD4AQ9P2Q2 1039 aaPredicted RBP14.59□□□□□ -0.07
TRIM39-207ENST00000428404 ZSCAN21Q9Y5A6 473 aaPredicted RBP14.59□□□□□ -0.07
TRIM39-207ENST00000428404 CCDC196A0A1B0GTZ2 297 aa14.58□□□□□ -0.08
TRIM39-207ENST00000428404 PALM3A6NDB9 673 aaPredicted RBP14.58□□□□□ -0.08
TRIM39-207ENST00000428404 UNCXA6NJT0 531 aa14.58□□□□□ -0.08
TRIM39-207ENST00000428404 USP17L5A8MUK1 530 aa14.58□□□□□ -0.08
TRIM39-207ENST00000428404 KIF3CO14782 793 aa14.58□□□□□ -0.08
TRIM39-207ENST00000428404 DDIT3P35638 169 aa14.58□□□□□ -0.08
TRIM39-207ENST00000428404 ATP2B2Q01814 1243 aa14.58□□□□□ -0.08
TRIM39-207ENST00000428404 FMR1Q06787 632 aaKnown RBP eCLIP14.58□□□□□ -0.08
TRIM39-207ENST00000428404 PRKG1Q13976 671 aa14.58□□□□□ -0.08
TRIM39-207ENST00000428404 CCDC144CPQ8IYA2 1237 aa14.58□□□□□ -0.08
TRIM39-207ENST00000428404 NSUN7Q8NE18 718 aaKnown RBP14.58□□□□□ -0.08
TRIM39-207ENST00000428404 ARHGEF10LQ9HCE6 1279 aa14.58□□□□□ -0.08
TRIM39-207ENST00000428404 RBM28Q9NW13 759 aaKnown RBP14.58□□□□□ -0.08
TRIM39-207ENST00000428404 MAD2L2Q9UI95 211 aa14.58□□□□□ -0.08
TRIM39-207ENST00000428404 F5H6K3 240 aa14.57□□□□□ -0.08
TRIM39-207ENST00000428404 HSP90AA1P07900 732 aaKnown RBP14.57□□□□□ -0.08
TRIM39-207ENST00000428404 PDHBP11177 359 aa14.57□□□□□ -0.08
TRIM39-207ENST00000428404 IFNAR1P17181 557 aa14.57□□□□□ -0.08
TRIM39-207ENST00000428404 KIF5BP33176 963 aa14.57□□□□□ -0.08
TRIM39-207ENST00000428404 ECE1P42892 770 aa14.57□□□□□ -0.08
TRIM39-207ENST00000428404 KLRC3Q07444 240 aa14.57□□□□□ -0.08
TRIM39-207ENST00000428404 VGLL4Q14135 290 aa14.57□□□□□ -0.08
TRIM39-207ENST00000428404 TMTC3Q6ZXV5 915 aa14.57□□□□□ -0.08
TRIM39-207ENST00000428404 CCDC84Q86UT8 332 aaPredicted RBP14.57□□□□□ -0.08
TRIM39-207ENST00000428404 SPRYD3Q8NCJ5 442 aa14.57□□□□□ -0.08
TRIM39-207ENST00000428404 KIAA1683Q9H0B3 1180 aa14.57□□□□□ -0.08
TRIM39-207ENST00000428404 CWC22Q9HCG8 908 aaKnown RBP14.57□□□□□ -0.08
TRIM39-207ENST00000428404 PICK1Q9NRD5 415 aa14.57□□□□□ -0.08
TRIM39-207ENST00000428404 SNCAIPQ9Y6H5 919 aa14.57□□□□□ -0.08
TRIM39-207ENST00000428404 PAPPA2Q9BXP8 1791 aa14.57□□□□□ -0.08
TRIM39-207ENST00000428404 JAK2O60674 1132 aa14.56□□□□□ -0.08
TRIM39-207ENST00000428404 FDPSP14324 419 aaKnown RBP14.56□□□□□ -0.08
TRIM39-207ENST00000428404 SMARCA1P28370 1054 aa14.56□□□□□ -0.08
TRIM39-207ENST00000428404 GNAQP50148 359 aa14.56□□□□□ -0.08
TRIM39-207ENST00000428404 FKBP1BP68106 108 aa14.56□□□□□ -0.08
TRIM39-207ENST00000428404 KIAA1755Q5JYT7 1200 aa14.56□□□□□ -0.08
TRIM39-207ENST00000428404 MOB2Q70IA6 237 aa14.56□□□□□ -0.08
TRIM39-207ENST00000428404 ARMC9Q7Z3E5 817 aa14.56□□□□□ -0.08
TRIM39-207ENST00000428404 NBPF11Q86T75 865 aa14.56□□□□□ -0.08
TRIM39-207ENST00000428404 ANKRD13AQ8IZ07 590 aa14.56□□□□□ -0.08
TRIM39-207ENST00000428404 STAG2Q8N3U4 1231 aa14.56□□□□□ -0.08
TRIM39-207ENST00000428404 CTCFLQ8NI51 663 aaPredicted RBP14.56□□□□□ -0.08
TRIM39-207ENST00000428404 DCAF4Q8WV16 495 aa14.56□□□□□ -0.08
TRIM39-207ENST00000428404 GMCL1Q96IK5 515 aa14.56□□□□□ -0.08
TRIM39-207ENST00000428404 LZTS2Q9BRK4 669 aa14.56□□□□□ -0.08
TRIM39-207ENST00000428404 FOXD4L1Q9NU39 408 aa14.56□□□□□ -0.08
TRIM39-207ENST00000428404 CPLX1O14810 134 aa14.55□□□□□ -0.08
TRIM39-207ENST00000428404 CDKL5O76039 1030 aa14.55□□□□□ -0.08
TRIM39-207ENST00000428404 PLEKHA8P1O95397 391 aa14.55□□□□□ -0.08
TRIM39-207ENST00000428404 NDUFB10O96000 172 aa14.55□□□□□ -0.08
TRIM39-207ENST00000428404 PARP1P09874 1014 aaKnown RBP14.55□□□□□ -0.08
TRIM39-207ENST00000428404 HMGN5P82970 282 aaKnown RBP14.55□□□□□ -0.08
TRIM39-207ENST00000428404 ZNF543Q08ER8 600 aa14.55□□□□□ -0.08
TRIM39-207ENST00000428404 SLC35G1Q2M3R5 365 aa14.55□□□□□ -0.08
TRIM39-207ENST00000428404 ASPRV1Q53RT3 343 aa14.55□□□□□ -0.08
TRIM39-207ENST00000428404 CST9Q5W186 159 aa14.55□□□□□ -0.08
TRIM39-207ENST00000428404 SLFN13Q68D06 897 aa14.55□□□□□ -0.08
TRIM39-207ENST00000428404 CPLX2Q6PUV4 134 aaKnown RBP14.55□□□□□ -0.08
TRIM39-207ENST00000428404 USP17L2Q6R6M4 530 aa14.55□□□□□ -0.08
TRIM39-207ENST00000428404 RASGRP2Q7LDG7 609 aa14.55□□□□□ -0.08
TRIM39-207ENST00000428404 SRBD1Q8N5C6 995 aaKnown RBP14.55□□□□□ -0.08
TRIM39-207ENST00000428404 ZNF280CQ8ND82 737 aa14.55□□□□□ -0.08
TRIM39-207ENST00000428404 SH2D4AQ9H788 454 aa14.55□□□□□ -0.08
TRIM39-207ENST00000428404 VCPKMTQ9H867 229 aa14.55□□□□□ -0.08
TRIM39-207ENST00000428404 GOPCQ9HD26 462 aa14.55□□□□□ -0.08
TRIM39-207ENST00000428404 SMC3Q9UQE7 1217 aa14.55□□□□□ -0.08
TRIM39-207ENST00000428404 AFG3L2Q9Y4W6 797 aa14.55□□□□□ -0.08
TRIM39-207ENST00000428404 CSADQ9Y600 493 aa14.55□□□□□ -0.08
TRIM39-207ENST00000428404 ZHX2Q9Y6X8 837 aa14.55□□□□□ -0.08
TRIM39-207ENST00000428404 PTPDC1A2A3K4 754 aa14.54□□□□□ -0.08
TRIM39-207ENST00000428404 UBE2Q2LH0YL09 131 aa14.54□□□□□ -0.08
TRIM39-207ENST00000428404 DTNBO60941 627 aa14.54□□□□□ -0.08
TRIM39-207ENST00000428404 BACE1P56817 501 aa14.54□□□□□ -0.08
TRIM39-207ENST00000428404 SPP2Q13103 211 aa14.54□□□□□ -0.08
TRIM39-207ENST00000428404 GPATCH4Q5T3I0 446 aaKnown RBP14.54□□□□□ -0.08
TRIM39-207ENST00000428404 CLMNQ96JQ2 1002 aa14.54□□□□□ -0.08
TRIM39-207ENST00000428404 AS3MTQ9HBK9 375 aa14.54□□□□□ -0.08
TRIM39-207ENST00000428404 GBA2Q9HCG7 927 aaPredicted RBP14.54□□□□□ -0.08
TRIM39-207ENST00000428404 PASKQ96RG2 1323 aa14.54□□□□□ -0.08
TRIM39-207ENST00000428404 DOCK1Q14185 1865 aa14.54□□□□□ -0.08
TRIM39-207ENST00000428404 MYH4Q9Y623 1939 aa14.53□□□□□ -0.08
TRIM39-207ENST00000428404 ATAD5Q96QE3 1844 aa14.53□□□□□ -0.08
TRIM39-207ENST00000428404 STK36Q9NRP7 1315 aa14.53□□□□□ -0.08
TRIM39-207ENST00000428404 SPDYE5A6NIY4 337 aa14.53□□□□□ -0.08
TRIM39-207ENST00000428404 USP17L10C9JJH3 530 aa14.53□□□□□ -0.08
TRIM39-207ENST00000428404 KLRF2D3W0D1 207 aa14.53□□□□□ -0.08
TRIM39-207ENST00000428404 CYTH3O43739 400 aa14.53□□□□□ -0.08
TRIM39-207ENST00000428404 CELF2O95319 508 aaKnown RBP14.53□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms