RNA–Protein interactions for RNA: ENST00000427926.5

CLTCL1-202, Transcript of clathrin heavy chain like 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CLTCL1, Length 5,513 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-202ENST00000427926 GOLGA6DP0CG33 693 aa11.03□□□□□ -0.64
CLTCL1-202ENST00000427926 BCRP11274 1271 aa11.03□□□□□ -0.64
CLTCL1-202ENST00000427926 ARPP19P56211 112 aa11.03□□□□□ -0.64
CLTCL1-202ENST00000427926 PRR16Q569H4 304 aa11.03□□□□□ -0.64
CLTCL1-202ENST00000427926 DYMQ7RTS9 669 aa11.03□□□□□ -0.64
CLTCL1-202ENST00000427926 KRT26Q7Z3Y9 468 aa11.03□□□□□ -0.64
CLTCL1-202ENST00000427926 JPH2Q9BR39 696 aaPredicted RBP11.03□□□□□ -0.64
CLTCL1-202ENST00000427926 IRAK4Q9NWZ3 460 aa11.03□□□□□ -0.64
CLTCL1-202ENST00000427926 GOLGA6AQ9NYA3 693 aa11.03□□□□□ -0.64
CLTCL1-202ENST00000427926 EXOC8Q8IYI6 725 aa11.03□□□□□ -0.64
CLTCL1-202ENST00000427926 GANCQ8TET4 914 aa11.03□□□□□ -0.64
CLTCL1-202ENST00000427926 PARD3BQ8TEW8 1205 aa11.03□□□□□ -0.64
CLTCL1-202ENST00000427926 COA7Q96BR5 231 aa11.03□□□□□ -0.64
CLTCL1-202ENST00000427926 SUCLG2Q96I99 432 aa11.03□□□□□ -0.64
CLTCL1-202ENST00000427926 NT5C3AQ9H0P0 336 aa11.03□□□□□ -0.64
CLTCL1-202ENST00000427926 TNNQ9UQP3 1299 aa11.03□□□□□ -0.64
CLTCL1-202ENST00000427926 LEMD3Q9Y2U8 911 aa11.03□□□□□ -0.64
CLTCL1-202ENST00000427926 AFF2P51816 1311 aa11.03□□□□□ -0.64
CLTCL1-202ENST00000427926 LRRIQ4A6NIV6 560 aa11.03□□□□□ -0.64
CLTCL1-202ENST00000427926 USP17L12C9JPN9 530 aa11.03□□□□□ -0.64
CLTCL1-202ENST00000427926 USP17L21D6R901 530 aa11.03□□□□□ -0.64
CLTCL1-202ENST00000427926 SEPT14Q6ZU15 432 aa11.03□□□□□ -0.64
CLTCL1-202ENST00000427926 ZNF365Q70YC5 407 aa11.03□□□□□ -0.64
CLTCL1-202ENST00000427926 TTC30AQ86WT1 665 aa11.03□□□□□ -0.64
CLTCL1-202ENST00000427926 TRIM50Q86XT4 487 aa11.03□□□□□ -0.64
CLTCL1-202ENST00000427926 ZNF215Q9UL58 517 aaPredicted RBP11.03□□□□□ -0.64
CLTCL1-202ENST00000427926 ERICH4A6NGS2 130 aa11.02□□□□□ -0.64
CLTCL1-202ENST00000427926 SMIM23A6NLE4 172 aa11.02□□□□□ -0.64
CLTCL1-202ENST00000427926 TMEM191BP0C7N4 346 aa11.02□□□□□ -0.64
CLTCL1-202ENST00000427926 AK2P54819 239 aa11.02□□□□□ -0.64
CLTCL1-202ENST00000427926 SLC12A2P55011 1212 aa11.02□□□□□ -0.64
CLTCL1-202ENST00000427926 CHRNDQ07001 517 aa11.02□□□□□ -0.64
CLTCL1-202ENST00000427926 ASIC2Q16515 512 aa11.02□□□□□ -0.64
CLTCL1-202ENST00000427926 CEP128Q6ZU80 1094 aa11.02□□□□□ -0.64
CLTCL1-202ENST00000427926 MMP10P09238 476 aa11.02□□□□□ -0.65
CLTCL1-202ENST00000427926 PTPREP23469 700 aa11.02□□□□□ -0.65
CLTCL1-202ENST00000427926 POLA2Q14181 598 aa11.02□□□□□ -0.65
CLTCL1-202ENST00000427926 CASC4Q6P4E1 433 aa11.02□□□□□ -0.65
CLTCL1-202ENST00000427926 CFAP57Q96MR6 1250 aa11.02□□□□□ -0.65
CLTCL1-202ENST00000427926 NAP1L3Q99457 506 aaPredicted RBP11.02□□□□□ -0.65
CLTCL1-202ENST00000427926 SELENOSQ9BQE4 189 aa11.02□□□□□ -0.65
CLTCL1-202ENST00000427926 SPON1Q9HCB6 807 aa11.02□□□□□ -0.65
CLTCL1-202ENST00000427926 INSRP06213 1382 aa11.02□□□□□ -0.65
CLTCL1-202ENST00000427926 PER1O15534 1290 aaPredicted RBP11.02□□□□□ -0.65
CLTCL1-202ENST00000427926 RSRC2Q7L4I2 434 aaKnown RBP11.02□□□□□ -0.65
CLTCL1-202ENST00000427926 RYBPQ8N488 228 aaPredicted RBP11.02□□□□□ -0.65
CLTCL1-202ENST00000427926 GUCA1BQ9UMX6 200 aa11.02□□□□□ -0.65
CLTCL1-202ENST00000427926 UTP18Q9Y5J1 556 aaKnown RBP eCLIP11.02□□□□□ -0.65
CLTCL1-202ENST00000427926 SEMA3EO15041 775 aa11.02□□□□□ -0.65
CLTCL1-202ENST00000427926 RBM6P78332 1123 aaKnown RBP11.02□□□□□ -0.65
CLTCL1-202ENST00000427926 DNM1Q05193 864 aaKnown RBP11.02□□□□□ -0.65
CLTCL1-202ENST00000427926 DIS3L2Q8IYB7 885 aaKnown RBP11.02□□□□□ -0.65
CLTCL1-202ENST00000427926 UBL4BQ8N7F7 174 aa11.02□□□□□ -0.65
CLTCL1-202ENST00000427926 ZBTB38Q8NAP3 1195 aaPredicted RBP11.02□□□□□ -0.65
CLTCL1-202ENST00000427926 SLITRK6Q9H5Y7 841 aa11.02□□□□□ -0.65
CLTCL1-202ENST00000427926 THRAP3Q9Y2W1 955 aaKnown RBP11.02□□□□□ -0.65
CLTCL1-202ENST00000427926 KDM3AQ9Y4C1 1321 aa11.02□□□□□ -0.65
CLTCL1-202ENST00000427926 ABCA8O94911 1581 aa11.02□□□□□ -0.65
CLTCL1-202ENST00000427926 TNNC1P63316 161 aa11.01□□□□□ -0.65
CLTCL1-202ENST00000427926 TBC1D8BQ0IIM8 1120 aa11.01□□□□□ -0.65
CLTCL1-202ENST00000427926 ZNF449Q6P9G9 518 aa11.01□□□□□ -0.65
CLTCL1-202ENST00000427926 NELFCDQ8IXH7 590 aa11.01□□□□□ -0.65
CLTCL1-202ENST00000427926 TSGA10Q9BZW7 698 aa11.01□□□□□ -0.65
CLTCL1-202ENST00000427926 ARHGEF37A1IGU5 675 aa11.01□□□□□ -0.65
CLTCL1-202ENST00000427926 M0R2C6 588 aa11.01□□□□□ -0.65
CLTCL1-202ENST00000427926 PFDN6O15212 129 aa11.01□□□□□ -0.65
CLTCL1-202ENST00000427926 ATXN8OSP0DMR3 200 aa11.01□□□□□ -0.65
CLTCL1-202ENST00000427926 NPR1P16066 1061 aa11.01□□□□□ -0.65
CLTCL1-202ENST00000427926 SYT1P21579 422 aa11.01□□□□□ -0.65
CLTCL1-202ENST00000427926 POLR2BP30876 1174 aaKnown RBP11.01□□□□□ -0.65
CLTCL1-202ENST00000427926 G2E3Q7L622 706 aa11.01□□□□□ -0.65
CLTCL1-202ENST00000427926 PLA2G4DQ86XP0 818 aa11.01□□□□□ -0.65
CLTCL1-202ENST00000427926 CTAGE9A4FU28 777 aa11.01□□□□□ -0.65
CLTCL1-202ENST00000427926 DMP1Q13316 513 aaPredicted RBP11.01□□□□□ -0.65
CLTCL1-202ENST00000427926 KLHL40Q2TBA0 621 aa11.01□□□□□ -0.65
CLTCL1-202ENST00000427926 SPICE1Q8N0Z3 855 aa11.01□□□□□ -0.65
CLTCL1-202ENST00000427926 MYL10Q9BUA6 226 aa11.01□□□□□ -0.65
CLTCL1-202ENST00000427926 CTTNBP2NLQ9P2B4 639 aa11.01□□□□□ -0.65
CLTCL1-202ENST00000427926 FAM184BQ9ULE4 1060 aa11.01□□□□□ -0.65
CLTCL1-202ENST00000427926 SLC8A2Q9UPR5 921 aa11.01□□□□□ -0.65
CLTCL1-202ENST00000427926 PCDHB13Q9Y5F0 798 aa11.01□□□□□ -0.65
CLTCL1-202ENST00000427926 ELP1O95163 1332 aa11.01□□□□□ -0.65
CLTCL1-202ENST00000427926 RNF123Q5XPI4 1314 aa11.01□□□□□ -0.65
CLTCL1-202ENST00000427926 CABP7Q86V35 215 aa11.01□□□□□ -0.65
CLTCL1-202ENST00000427926 CSGALNACT2Q8N6G5 542 aa11.01□□□□□ -0.65
CLTCL1-202ENST00000427926 KBTBD3Q8NAB2 608 aa11.01□□□□□ -0.65
CLTCL1-202ENST00000427926 RDH13Q8NBN7 331 aa11.01□□□□□ -0.65
CLTCL1-202ENST00000427926 NOL12Q9UGY1 213 aaKnown RBP eCLIP11.01□□□□□ -0.65
CLTCL1-202ENST00000427926 V9GYY5 206 aaPredicted RBP11.01□□□□□ -0.65
CLTCL1-202ENST00000427926 KIAA0232Q92628 1395 aa11.01□□□□□ -0.65
CLTCL1-202ENST00000427926 TSTA3Q13630 321 aaPredicted RBP11.01□□□□□ -0.65
CLTCL1-202ENST00000427926 PDZD4Q76G19 769 aaPredicted RBP11.01□□□□□ -0.65
CLTCL1-202ENST00000427926 DNAJC25Q9H1X3 360 aa11.01□□□□□ -0.65
CLTCL1-202ENST00000427926 DCTPP1Q9H773 170 aa11.01□□□□□ -0.65
CLTCL1-202ENST00000427926 MAP3K15Q6ZN16 1313 aa11.01□□□□□ -0.65
CLTCL1-202ENST00000427926 ZMYM4Q5VZL5 1548 aa11.01□□□□□ -0.65
CLTCL1-202ENST00000427926 IQCA1LA6NCM1 817 aa11□□□□□ -0.65
CLTCL1-202ENST00000427926 RLBP1P12271 317 aa11□□□□□ -0.65
CLTCL1-202ENST00000427926 ODR4Q5SWX8 454 aa11□□□□□ -0.65
CLTCL1-202ENST00000427926 SKA2Q8WVK7 121 aaPredicted RBP11□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms