RNA–Protein interactions for RNA: ENST00000427785.5

RFC4-206, Transcript of replication factor C subunit 4, humanhuman

TSL 3

Gene RFC4, Length 485 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-206ENST00000427785 FZD1Q9UP38 647 aa14.05□□□□□ -0.16
RFC4-206ENST00000427785 STK36Q9NRP7 1315 aa14.05□□□□□ -0.16
RFC4-206ENST00000427785 TRPM7Q96QT4 1865 aa14.04□□□□□ -0.16
RFC4-206ENST00000427785 CCDC196A0A1B0GTZ2 297 aa14.04□□□□□ -0.16
RFC4-206ENST00000427785 IQCA1LA6NCM1 817 aa14.04□□□□□ -0.16
RFC4-206ENST00000427785 POTECB2RU33 542 aa14.04□□□□□ -0.16
RFC4-206ENST00000427785 STX6O43752 255 aa14.04□□□□□ -0.16
RFC4-206ENST00000427785 BRD1O95696 1058 aa14.04□□□□□ -0.16
RFC4-206ENST00000427785 EEF2P13639 858 aaKnown RBP14.04□□□□□ -0.16
RFC4-206ENST00000427785 IFNAR1P17181 557 aa14.04□□□□□ -0.16
RFC4-206ENST00000427785 LARP1BQ659C4 914 aaKnown RBP14.04□□□□□ -0.16
RFC4-206ENST00000427785 DCAF15Q66K64 600 aa14.04□□□□□ -0.16
RFC4-206ENST00000427785 CCDC84Q86UT8 332 aaPredicted RBP14.04□□□□□ -0.16
RFC4-206ENST00000427785 SULF1Q8IWU6 871 aa14.04□□□□□ -0.16
RFC4-206ENST00000427785 STAG2Q8N3U4 1231 aa14.04□□□□□ -0.16
RFC4-206ENST00000427785 CCDC82Q8N4S0 544 aa14.04□□□□□ -0.16
RFC4-206ENST00000427785 AIFM3Q96NN9 605 aa14.04□□□□□ -0.16
RFC4-206ENST00000427785 KANSL2Q9H9L4 492 aa14.04□□□□□ -0.16
RFC4-206ENST00000427785 FRMPD2Q68DX3 1309 aaPredicted RBP14.04□□□□□ -0.16
RFC4-206ENST00000427785 hCG_1642624A0A1W2PR95 340 aa14.03□□□□□ -0.16
RFC4-206ENST00000427785 USP17L5A8MUK1 530 aa14.03□□□□□ -0.16
RFC4-206ENST00000427785 RAD21O60216 631 aa14.03□□□□□ -0.16
RFC4-206ENST00000427785 FMNL1O95466 1100 aaPredicted RBP14.03□□□□□ -0.16
RFC4-206ENST00000427785 GOLGA8HP0CJ92 632 aa14.03□□□□□ -0.16
RFC4-206ENST00000427785 PDHBP11177 359 aa14.03□□□□□ -0.16
RFC4-206ENST00000427785 PDCP20941 246 aa14.03□□□□□ -0.16
RFC4-206ENST00000427785 KIF5BP33176 963 aa14.03□□□□□ -0.16
RFC4-206ENST00000427785 CAP2P40123 477 aa14.03□□□□□ -0.16
RFC4-206ENST00000427785 GUCY1B3Q02153 619 aa14.03□□□□□ -0.16
RFC4-206ENST00000427785 MAP3K10Q02779 954 aa14.03□□□□□ -0.16
RFC4-206ENST00000427785 SSRP1Q08945 709 aaKnown RBP14.03□□□□□ -0.16
RFC4-206ENST00000427785 CCDC96Q2M329 555 aa14.03□□□□□ -0.16
RFC4-206ENST00000427785 PPP4R3BQ5MIZ7 849 aa14.03□□□□□ -0.16
RFC4-206ENST00000427785 KRT26Q7Z3Y9 468 aa14.03□□□□□ -0.16
RFC4-206ENST00000427785 NBPF11Q86T75 865 aa14.03□□□□□ -0.16
RFC4-206ENST00000427785 TNPO1Q92973 898 aaKnown RBP14.03□□□□□ -0.16
RFC4-206ENST00000427785 ZNF341Q9BYN7 854 aa14.03□□□□□ -0.16
RFC4-206ENST00000427785 NYAP2Q9P242 653 aa14.03□□□□□ -0.16
RFC4-206ENST00000427785 MAD2L2Q9UI95 211 aa14.03□□□□□ -0.16
RFC4-206ENST00000427785 MTMR6Q9Y217 621 aa14.03□□□□□ -0.16
RFC4-206ENST00000427785 KIF3AQ9Y496 699 aa14.03□□□□□ -0.16
RFC4-206ENST00000427785 WDR33Q9C0J8 1336 aaKnown RBP14.03□□□□□ -0.16
RFC4-206ENST00000427785 PHF20L1A8MW92 1017 aa14.02□□□□□ -0.17
RFC4-206ENST00000427785 PARP1P09874 1014 aaKnown RBP14.02□□□□□ -0.17
RFC4-206ENST00000427785 POTEIP0CG38 1075 aa14.02□□□□□ -0.17
RFC4-206ENST00000427785 POTEJP0CG39 1038 aa14.02□□□□□ -0.17
RFC4-206ENST00000427785 ZSCAN22P10073 491 aaPredicted RBP14.02□□□□□ -0.17
RFC4-206ENST00000427785 INPP5BP32019 993 aa14.02□□□□□ -0.17
RFC4-206ENST00000427785 FUT2Q10981 343 aa14.02□□□□□ -0.17
RFC4-206ENST00000427785 PPP2R5BQ15173 497 aa14.02□□□□□ -0.17
RFC4-206ENST00000427785 SLC35G1Q2M3R5 365 aa14.02□□□□□ -0.17
RFC4-206ENST00000427785 USP17L2Q6R6M4 530 aa14.02□□□□□ -0.17
RFC4-206ENST00000427785 TRIM22Q8IYM9 498 aa14.02□□□□□ -0.17
RFC4-206ENST00000427785 SRBD1Q8N5C6 995 aaKnown RBP14.02□□□□□ -0.17
RFC4-206ENST00000427785 PIBF1Q8WXW3 757 aa14.02□□□□□ -0.17
RFC4-206ENST00000427785 ALG1Q9BT22 464 aa14.02□□□□□ -0.17
RFC4-206ENST00000427785 CPVLQ9H3G5 476 aa14.02□□□□□ -0.17
RFC4-206ENST00000427785 ISY1Q9ULR0 285 aaKnown RBP14.02□□□□□ -0.17
RFC4-206ENST00000427785 COL11A1P12107 1806 aaPredicted RBP14.01□□□□□ -0.17
RFC4-206ENST00000427785 LOC285556D6RIA3 1793 aa14.01□□□□□ -0.17
RFC4-206ENST00000427785 DCAF8L1A6NGE4 600 aa14.01□□□□□ -0.17
RFC4-206ENST00000427785 H3BQV1 296 aa14.01□□□□□ -0.17
RFC4-206ENST00000427785 F13A1P00488 732 aa14.01□□□□□ -0.17
RFC4-206ENST00000427785 ECE1P42892 770 aa14.01□□□□□ -0.17
RFC4-206ENST00000427785 PRKG1Q13976 671 aa14.01□□□□□ -0.17
RFC4-206ENST00000427785 IFFO2Q5TF58 517 aa14.01□□□□□ -0.17
RFC4-206ENST00000427785 OTUD7BQ6GQQ9 843 aa14.01□□□□□ -0.17
RFC4-206ENST00000427785 SIAH1Q8IUQ4 282 aa14.01□□□□□ -0.17
RFC4-206ENST00000427785 ACER1Q8TDN7 264 aa14.01□□□□□ -0.17
RFC4-206ENST00000427785 HOOK2Q96ED9 719 aa14.01□□□□□ -0.17
RFC4-206ENST00000427785 CHAMP1Q96JM3 812 aa14.01□□□□□ -0.17
RFC4-206ENST00000427785 C8orf76Q96K31 380 aa14.01□□□□□ -0.17
RFC4-206ENST00000427785 WRNIP1Q96S55 665 aa14.01□□□□□ -0.17
RFC4-206ENST00000427785 MAP3K14Q99558 947 aa14.01□□□□□ -0.17
RFC4-206ENST00000427785 GLIS2Q9BZE0 524 aaPredicted RBP14.01□□□□□ -0.17
RFC4-206ENST00000427785 ARHGEF10LQ9HCE6 1279 aa14.01□□□□□ -0.17
RFC4-206ENST00000427785 GPCPD1Q9NPB8 672 aa14.01□□□□□ -0.17
RFC4-206ENST00000427785 GJB4Q9NTQ9 266 aa14.01□□□□□ -0.17
RFC4-206ENST00000427785 SMCHD1A6NHR9 2005 aa14.01□□□□□ -0.17
RFC4-206ENST00000427785 RBBP6Q7Z6E9 1792 aaKnown RBP14.01□□□□□ -0.17
RFC4-206ENST00000427785 A0A1W2PRG0 241 aa14□□□□□ -0.17
RFC4-206ENST00000427785 PALM3A6NDB9 673 aaPredicted RBP14□□□□□ -0.17
RFC4-206ENST00000427785 ASNSP08243 561 aa14□□□□□ -0.17
RFC4-206ENST00000427785 SNHG28P0DPA3 235 aa14□□□□□ -0.17
RFC4-206ENST00000427785 ZYXQ15942 572 aaKnown RBP14□□□□□ -0.17
RFC4-206ENST00000427785 ASPRV1Q53RT3 343 aa14□□□□□ -0.17
RFC4-206ENST00000427785 USP48Q86UV5 1035 aa14□□□□□ -0.17
RFC4-206ENST00000427785 FERMT3Q86UX7 667 aa14□□□□□ -0.17
RFC4-206ENST00000427785 ZNF526Q8TF50 670 aaPredicted RBP14□□□□□ -0.17
RFC4-206ENST00000427785 CDCA5Q96FF9 252 aa14□□□□□ -0.17
RFC4-206ENST00000427785 RNF26Q9BY78 433 aaPredicted RBP14□□□□□ -0.17
RFC4-206ENST00000427785 KLRF2D3W0D1 207 aa13.99□□□□□ -0.17
RFC4-206ENST00000427785 DEXIO95424 95 aa13.99□□□□□ -0.17
RFC4-206ENST00000427785 NDUFB10O96000 172 aa13.99□□□□□ -0.17
RFC4-206ENST00000427785 GNAQP50148 359 aa13.99□□□□□ -0.17
RFC4-206ENST00000427785 AKAP17AQ02040 695 aaKnown RBP13.99□□□□□ -0.17
RFC4-206ENST00000427785 ZNF543Q08ER8 600 aa13.99□□□□□ -0.17
RFC4-206ENST00000427785 FOXD4L6Q3SYB3 417 aaPredicted RBP13.99□□□□□ -0.17
RFC4-206ENST00000427785 SUPT20HL1Q3ZLR7 823 aa13.99□□□□□ -0.17
RFC4-206ENST00000427785 SLFN13Q68D06 897 aa13.99□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms