RNA–Protein interactions for RNA: ENST00000427516.2

VTI1BP4-201, Transcript of vesicle transport through interaction with t-SNAREs 1B pseudogene 4, humanhuman

BASIC

Gene VTI1BP4, Length 527 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1BP4-201ENST00000427516 CACNA2D3Q8IZS8 1091 aa6.28□□□□□ -1.4
VTI1BP4-201ENST00000427516 MLKLQ8NB16 471 aa6.28□□□□□ -1.4
VTI1BP4-201ENST00000427516 LRRN4CLQ8ND94 238 aa6.28□□□□□ -1.4
VTI1BP4-201ENST00000427516 NOC3LQ8WTT2 800 aaKnown RBP6.28□□□□□ -1.4
VTI1BP4-201ENST00000427516 GFM2Q969S9 779 aaKnown RBP6.28□□□□□ -1.4
VTI1BP4-201ENST00000427516 TRAPPC9Q96Q05 1148 aa6.28□□□□□ -1.4
VTI1BP4-201ENST00000427516 TSPAN18Q96SJ8 248 aa6.28□□□□□ -1.4
VTI1BP4-201ENST00000427516 NAP1L3Q99457 506 aaPredicted RBP6.28□□□□□ -1.4
VTI1BP4-201ENST00000427516 TSGA10Q9BZW7 698 aa6.28□□□□□ -1.4
VTI1BP4-201ENST00000427516 LSG1Q9H089 658 aaKnown RBP6.28□□□□□ -1.4
VTI1BP4-201ENST00000427516 NSRP1Q9H0G5 558 aaKnown RBP6.28□□□□□ -1.4
VTI1BP4-201ENST00000427516 HAUS4Q9H6D7 363 aa6.28□□□□□ -1.4
VTI1BP4-201ENST00000427516 CD248Q9HCU0 757 aa6.28□□□□□ -1.4
VTI1BP4-201ENST00000427516 GOPCQ9HD26 462 aa6.28□□□□□ -1.4
VTI1BP4-201ENST00000427516 LUC7LQ9NQ29 371 aaKnown RBP6.28□□□□□ -1.4
VTI1BP4-201ENST00000427516 ANKIB1Q9P2G1 1089 aa6.28□□□□□ -1.4
VTI1BP4-201ENST00000427516 CIDEBQ9UHD4 219 aa6.28□□□□□ -1.4
VTI1BP4-201ENST00000427516 DDX20Q9UHI6 824 aaKnown RBP6.28□□□□□ -1.4
VTI1BP4-201ENST00000427516 EPB41L3Q9Y2J2 1087 aaPredicted RBP6.28□□□□□ -1.4
VTI1BP4-201ENST00000427516 C15orf41Q9Y2V0 281 aa6.28□□□□□ -1.4
VTI1BP4-201ENST00000427516 DAAM1Q9Y4D1 1078 aa6.28□□□□□ -1.4
VTI1BP4-201ENST00000427516 ARHGAP5Q13017 1502 aa6.28□□□□□ -1.4
VTI1BP4-201ENST00000427516 N4BP2Q86UW6 1770 aaPredicted RBP6.28□□□□□ -1.4
VTI1BP4-201ENST00000427516 RFX7Q2KHR2 1363 aa6.28□□□□□ -1.4
VTI1BP4-201ENST00000427516 ITIH6Q6UXX5 1313 aa6.27□□□□□ -1.41
VTI1BP4-201ENST00000427516 USP42Q9H9J4 1324 aaKnown RBP6.27□□□□□ -1.41
VTI1BP4-201ENST00000427516 ABCC3O15438 1527 aa6.27□□□□□ -1.41
VTI1BP4-201ENST00000427516 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP6.27□□□□□ -1.41
VTI1BP4-201ENST00000427516 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP6.27□□□□□ -1.41
VTI1BP4-201ENST00000427516 LRRIQ3A6PVS8 624 aaPredicted RBP6.27□□□□□ -1.41
VTI1BP4-201ENST00000427516 MYO1FO00160 1098 aa6.27□□□□□ -1.41
VTI1BP4-201ENST00000427516 MGRN1O60291 552 aa6.27□□□□□ -1.41
VTI1BP4-201ENST00000427516 SMIM24O75264 130 aa6.27□□□□□ -1.41
VTI1BP4-201ENST00000427516 SYF2O95926 243 aaKnown RBP6.27□□□□□ -1.41
VTI1BP4-201ENST00000427516 OATP04181 439 aa6.27□□□□□ -1.41
VTI1BP4-201ENST00000427516 SLC10A3P09131 477 aa6.27□□□□□ -1.41
VTI1BP4-201ENST00000427516 RHOXF2BP0C7M4 288 aa6.27□□□□□ -1.41
VTI1BP4-201ENST00000427516 ZFXP17010 805 aaPredicted RBP6.27□□□□□ -1.41
VTI1BP4-201ENST00000427516 GBP1P32455 592 aa6.27□□□□□ -1.41
VTI1BP4-201ENST00000427516 KRT83P78385 493 aa6.27□□□□□ -1.41
VTI1BP4-201ENST00000427516 MRPS25P82663 173 aaKnown RBP6.27□□□□□ -1.41
VTI1BP4-201ENST00000427516 LACTBP83111 547 aaPredicted RBP6.27□□□□□ -1.41
VTI1BP4-201ENST00000427516 ATP11AP98196 1134 aa6.27□□□□□ -1.41
VTI1BP4-201ENST00000427516 SPAG1Q07617 926 aa6.27□□□□□ -1.41
VTI1BP4-201ENST00000427516 BIRC3Q13489 604 aa6.27□□□□□ -1.41
VTI1BP4-201ENST00000427516 STK38Q15208 465 aa6.27□□□□□ -1.41
VTI1BP4-201ENST00000427516 ENOX2Q16206 610 aaKnown RBP6.27□□□□□ -1.41
VTI1BP4-201ENST00000427516 CCDC96Q2M329 555 aa6.27□□□□□ -1.41
VTI1BP4-201ENST00000427516 TSNAXIP1Q2TAA8 658 aa6.27□□□□□ -1.41
VTI1BP4-201ENST00000427516 ZNF569Q5MCW4 686 aa6.27□□□□□ -1.41
VTI1BP4-201ENST00000427516 HDGFL1Q5TGJ6 251 aa6.27□□□□□ -1.41
VTI1BP4-201ENST00000427516 NAA35Q5VZE5 725 aa6.27□□□□□ -1.41
VTI1BP4-201ENST00000427516 MTHFD1LQ6UB35 978 aa6.27□□□□□ -1.41
VTI1BP4-201ENST00000427516 CYP26C1Q6V0L0 522 aa6.27□□□□□ -1.41
VTI1BP4-201ENST00000427516 CCDC129Q6ZRS4 1044 aa6.27□□□□□ -1.41
VTI1BP4-201ENST00000427516 ZNF662Q6ZS27 426 aa6.27□□□□□ -1.41
VTI1BP4-201ENST00000427516 RASGRP2Q7LDG7 609 aa6.27□□□□□ -1.41
VTI1BP4-201ENST00000427516 LCA5Q86VQ0 697 aa6.27□□□□□ -1.41
VTI1BP4-201ENST00000427516 CCDC65Q8IXS2 484 aa6.27□□□□□ -1.41
VTI1BP4-201ENST00000427516 C16orf71Q8IYS4 520 aaPredicted RBP6.27□□□□□ -1.41
VTI1BP4-201ENST00000427516 FUKQ8N0W3 1084 aa6.27□□□□□ -1.41
VTI1BP4-201ENST00000427516 FMR1NBQ8N0W7 255 aaPredicted RBP6.27□□□□□ -1.41
VTI1BP4-201ENST00000427516 FAM177A1Q8N128 213 aaPredicted RBP6.27□□□□□ -1.41
VTI1BP4-201ENST00000427516 GALNT15Q8N3T1 639 aa6.27□□□□□ -1.41
VTI1BP4-201ENST00000427516 PDILTQ8N807 584 aa6.27□□□□□ -1.41
VTI1BP4-201ENST00000427516 EIF1ADQ8N9N8 165 aaKnown RBP6.27□□□□□ -1.41
VTI1BP4-201ENST00000427516 ENGASEQ8NFI3 743 aa6.27□□□□□ -1.41
VTI1BP4-201ENST00000427516 B4GALNT2Q8NHY0 566 aa6.27□□□□□ -1.41
VTI1BP4-201ENST00000427516 FBF1Q8TES7 1133 aa6.27□□□□□ -1.41
VTI1BP4-201ENST00000427516 EZH1Q92800 747 aaPredicted RBP6.27□□□□□ -1.41
VTI1BP4-201ENST00000427516 CAVIN3Q969G5 261 aa6.27□□□□□ -1.41
VTI1BP4-201ENST00000427516 EVI5LQ96CN4 794 aa6.27□□□□□ -1.41
VTI1BP4-201ENST00000427516 MAML3Q96JK9 1138 aa6.27□□□□□ -1.41
VTI1BP4-201ENST00000427516 WDR24Q96S15 920 aa6.27□□□□□ -1.41
VTI1BP4-201ENST00000427516 RHOXF2Q9BQY4 288 aa6.27□□□□□ -1.41
VTI1BP4-201ENST00000427516 SELENOOQ9BVL4 669 aa6.27□□□□□ -1.41
VTI1BP4-201ENST00000427516 TRIM4Q9C037 500 aa6.27□□□□□ -1.41
VTI1BP4-201ENST00000427516 FAM192AQ9GZU8 254 aa6.27□□□□□ -1.41
VTI1BP4-201ENST00000427516 CNOT10Q9H9A5 744 aaKnown RBP6.27□□□□□ -1.41
VTI1BP4-201ENST00000427516 EIF4ENIF1Q9NRA8 985 aaKnown RBP6.27□□□□□ -1.41
VTI1BP4-201ENST00000427516 POLR3EQ9NVU0 708 aa6.27□□□□□ -1.41
VTI1BP4-201ENST00000427516 RTEL1Q9NZ71 1219 aa6.27□□□□□ -1.41
VTI1BP4-201ENST00000427516 LARSQ9P2J5 1176 aaKnown RBP6.27□□□□□ -1.41
VTI1BP4-201ENST00000427516 RNF14Q9UBS8 474 aa6.27□□□□□ -1.41
VTI1BP4-201ENST00000427516 PUF60Q9UHX1 559 aaKnown RBP6.27□□□□□ -1.41
VTI1BP4-201ENST00000427516 RIPOR2Q9Y4F9 1068 aa6.27□□□□□ -1.41
VTI1BP4-201ENST00000427516 SETD1AO15047 1707 aaKnown RBP6.27□□□□□ -1.41
VTI1BP4-201ENST00000427516 MYH15Q9Y2K3 1946 aa6.27□□□□□ -1.41
VTI1BP4-201ENST00000427516 CEP170BQ9Y4F5 1589 aaPredicted RBP6.27□□□□□ -1.41
VTI1BP4-201ENST00000427516 GRIN2DO15399 1336 aa6.26□□□□□ -1.41
VTI1BP4-201ENST00000427516 TMEM232C9JQI7 657 aa6.26□□□□□ -1.41
VTI1BP4-201ENST00000427516 PSMD14O00487 310 aa6.26□□□□□ -1.41
VTI1BP4-201ENST00000427516 GNPATO15228 680 aa6.26□□□□□ -1.41
VTI1BP4-201ENST00000427516 KRT86O43790 486 aa6.26□□□□□ -1.41
VTI1BP4-201ENST00000427516 N4BP1O75113 896 aaKnown RBP6.26□□□□□ -1.41
VTI1BP4-201ENST00000427516 ZPR1O75312 459 aa6.26□□□□□ -1.41
VTI1BP4-201ENST00000427516 SMNDC1O75940 238 aaKnown RBP eCLIP6.26□□□□□ -1.41
VTI1BP4-201ENST00000427516 NPTXRO95502 500 aa6.26□□□□□ -1.41
VTI1BP4-201ENST00000427516 RPS6KB1P23443 525 aa6.26□□□□□ -1.41
VTI1BP4-201ENST00000427516 CMA1P23946 247 aa6.26□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms