RNA–Protein interactions for RNA: ENST00000427473.2

CTLA4-203, Transcript of cytotoxic T-lymphocyte associated protein 4, humanhuman

TSL 5 BASIC

Gene CTLA4, Length 969 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTLA4-203ENST00000427473 NYAP2Q9P242 653 aa15.27■□□□□ 0.04
CTLA4-203ENST00000427473 VCAM1P19320 739 aa15.26■□□□□ 0.03
CTLA4-203ENST00000427473 LBX1P52954 281 aa15.26■□□□□ 0.03
CTLA4-203ENST00000427473 PABPC4Q13310 644 aaKnown RBP eCLIP15.26■□□□□ 0.03
CTLA4-203ENST00000427473 R3HDMLQ9H3Y0 253 aa15.26■□□□□ 0.03
CTLA4-203ENST00000427473 VCPKMTQ9H867 229 aa15.26■□□□□ 0.03
CTLA4-203ENST00000427473 MTMR4Q9NYA4 1195 aa15.26■□□□□ 0.03
CTLA4-203ENST00000427473 PNMA3Q9UL41 463 aa15.26■□□□□ 0.03
CTLA4-203ENST00000427473 TLR2O60603 784 aa15.25■□□□□ 0.03
CTLA4-203ENST00000427473 TTLL1O95922 423 aa15.25■□□□□ 0.03
CTLA4-203ENST00000427473 HOXA7P31268 230 aaPredicted RBP15.25■□□□□ 0.03
CTLA4-203ENST00000427473 NOVP48745 357 aa15.25■□□□□ 0.03
CTLA4-203ENST00000427473 ATP2B2Q01814 1243 aa15.25■□□□□ 0.03
CTLA4-203ENST00000427473 PPP4R3BQ5MIZ7 849 aa15.25■□□□□ 0.03
CTLA4-203ENST00000427473 NKX2-3Q8TAU0 364 aa15.25■□□□□ 0.03
CTLA4-203ENST00000427473 LPAR1Q92633 364 aa15.25■□□□□ 0.03
CTLA4-203ENST00000427473 ESR2Q92731 530 aa15.25■□□□□ 0.03
CTLA4-203ENST00000427473 CNNM2Q9H8M5 875 aa15.25■□□□□ 0.03
CTLA4-203ENST00000427473 PRDM10Q9NQV6 1147 aa15.25■□□□□ 0.03
CTLA4-203ENST00000427473 IL17RBQ9NRM6 502 aa15.25■□□□□ 0.03
CTLA4-203ENST00000427473 SYNPO2Q9UMS6 1093 aa15.25■□□□□ 0.03
CTLA4-203ENST00000427473 GPR25O00155 361 aa15.24■□□□□ 0.03
CTLA4-203ENST00000427473 CYP2C8P10632 490 aa15.24■□□□□ 0.03
CTLA4-203ENST00000427473 OSBPP22059 807 aa15.24■□□□□ 0.03
CTLA4-203ENST00000427473 KIAA1755Q5JYT7 1200 aa15.24■□□□□ 0.03
CTLA4-203ENST00000427473 MKL1Q969V6 931 aa15.24■□□□□ 0.03
CTLA4-203ENST00000427473 KRT23Q9C075 422 aa15.24■□□□□ 0.03
CTLA4-203ENST00000427473 GOPCQ9HD26 462 aa15.24■□□□□ 0.03
CTLA4-203ENST00000427473 TCP11L1Q9NUJ3 509 aa15.24■□□□□ 0.03
CTLA4-203ENST00000427473 TAF6LQ9Y6J9 622 aa15.24■□□□□ 0.03
CTLA4-203ENST00000427473 B4E1Z4 1266 aa15.23■□□□□ 0.03
CTLA4-203ENST00000427473 WDR46O15213 610 aaKnown RBP15.23■□□□□ 0.03
CTLA4-203ENST00000427473 NMT2O60551 498 aa15.23■□□□□ 0.03
CTLA4-203ENST00000427473 IRX3P78415 501 aaPredicted RBP15.23■□□□□ 0.03
CTLA4-203ENST00000427473 NECTIN1Q15223 517 aa15.23■□□□□ 0.03
CTLA4-203ENST00000427473 LRRC47Q8N1G4 583 aaKnown RBP15.23■□□□□ 0.03
CTLA4-203ENST00000427473 ZNF296Q8WUU4 475 aaPredicted RBP15.23■□□□□ 0.03
CTLA4-203ENST00000427473 ASCC2Q9H1I8 757 aaPredicted RBP15.23■□□□□ 0.03
CTLA4-203ENST00000427473 RPAP3Q9H6T3 665 aaPredicted RBP15.23■□□□□ 0.03
CTLA4-203ENST00000427473 CLIP2Q9UDT6 1046 aa15.23■□□□□ 0.03
CTLA4-203ENST00000427473 USP17L15C9J2P7 530 aa15.22■□□□□ 0.03
CTLA4-203ENST00000427473 USP17L13C9JLJ4 530 aa15.22■□□□□ 0.03
CTLA4-203ENST00000427473 USP17L11C9JVI0 530 aa15.22■□□□□ 0.03
CTLA4-203ENST00000427473 USP17L18D6R9N7 530 aa15.22■□□□□ 0.03
CTLA4-203ENST00000427473 USP17L22D6RA61 530 aa15.22■□□□□ 0.03
CTLA4-203ENST00000427473 USP17L17D6RBQ6 530 aa15.22■□□□□ 0.03
CTLA4-203ENST00000427473 USP17L19D6RCP7 530 aa15.22■□□□□ 0.03
CTLA4-203ENST00000427473 USP17L20D6RJB6 530 aa15.22■□□□□ 0.03
CTLA4-203ENST00000427473 E7EWF7 191 aa15.22■□□□□ 0.03
CTLA4-203ENST00000427473 SLC27A2O14975 620 aa15.22■□□□□ 0.03
CTLA4-203ENST00000427473 KDM4AO75164 1064 aa15.22■□□□□ 0.03
CTLA4-203ENST00000427473 USP17L24Q0WX57 530 aa15.22■□□□□ 0.03
CTLA4-203ENST00000427473 CREB3L3Q68CJ9 461 aa15.22■□□□□ 0.03
CTLA4-203ENST00000427473 C17orf99Q6UX52 265 aa15.22■□□□□ 0.03
CTLA4-203ENST00000427473 CATSPERGQ6ZRH7 1159 aa15.22■□□□□ 0.03
CTLA4-203ENST00000427473 STOX1Q6ZVD7 989 aa15.22■□□□□ 0.03
CTLA4-203ENST00000427473 IFNLR1Q8IU57 520 aaPredicted RBP15.22■□□□□ 0.03
CTLA4-203ENST00000427473 GMCL1P1Q8NEA9 526 aa15.22■□□□□ 0.03
CTLA4-203ENST00000427473 SMCR8Q8TEV9 937 aaPredicted RBP15.22■□□□□ 0.03
CTLA4-203ENST00000427473 STX8Q9UNK0 236 aa15.22■□□□□ 0.03
CTLA4-203ENST00000427473 FKTNO75072 461 aa15.21■□□□□ 0.03
CTLA4-203ENST00000427473 REC8O95072 547 aa15.21■□□□□ 0.03
CTLA4-203ENST00000427473 NDUFB10O96000 172 aa15.21■□□□□ 0.03
CTLA4-203ENST00000427473 BCRP11274 1271 aa15.21■□□□□ 0.03
CTLA4-203ENST00000427473 TRDNQ13061 729 aa15.21■□□□□ 0.03
CTLA4-203ENST00000427473 SPICE1Q8N0Z3 855 aa15.21■□□□□ 0.03
CTLA4-203ENST00000427473 CPA4Q9UI42 421 aa15.21■□□□□ 0.03
CTLA4-203ENST00000427473 GTF3C3Q9Y5Q9 886 aa15.21■□□□□ 0.03
CTLA4-203ENST00000427473 A0A0G2JMZ2 1700 aa15.2■□□□□ 0.02
CTLA4-203ENST00000427473 MYH4Q9Y623 1939 aa15.2■□□□□ 0.02
CTLA4-203ENST00000427473 F5H6K3 240 aa15.2■□□□□ 0.02
CTLA4-203ENST00000427473 EPB41L2O43491 1005 aaKnown RBP15.2■□□□□ 0.02
CTLA4-203ENST00000427473 GCLCP48506 637 aaPredicted RBP15.2■□□□□ 0.02
CTLA4-203ENST00000427473 HERVK_113P62684 666 aa15.2■□□□□ 0.02
CTLA4-203ENST00000427473 SP3Q02447 781 aa15.2■□□□□ 0.02
CTLA4-203ENST00000427473 KLRC3Q07444 240 aa15.2■□□□□ 0.02
CTLA4-203ENST00000427473 CCDC178Q5BJE1 867 aa15.2■□□□□ 0.02
CTLA4-203ENST00000427473 RNF20Q5VTR2 975 aa15.2■□□□□ 0.02
CTLA4-203ENST00000427473 RALYLQ86SE5 291 aaKnown RBP15.2■□□□□ 0.02
CTLA4-203ENST00000427473 IQCA1Q86XH1 822 aa15.2■□□□□ 0.02
CTLA4-203ENST00000427473 NCOA7Q8NI08 942 aa15.2■□□□□ 0.02
CTLA4-203ENST00000427473 GTF3C2Q8WUA4 911 aaPredicted RBP15.2■□□□□ 0.02
CTLA4-203ENST00000427473 TANGO6Q9C0B7 1094 aa15.2■□□□□ 0.02
CTLA4-203ENST00000427473 ZSWIM5Q9P217 1185 aa15.2■□□□□ 0.02
CTLA4-203ENST00000427473 TNKSO95271 1327 aa15.19■□□□□ 0.02
CTLA4-203ENST00000427473 RAD21O60216 631 aa15.19■□□□□ 0.02
CTLA4-203ENST00000427473 FAM110CQ1W6H9 321 aa15.19■□□□□ 0.02
CTLA4-203ENST00000427473 FAM83BQ5T0W9 1011 aa15.19■□□□□ 0.02
CTLA4-203ENST00000427473 RCSD1Q6JBY9 416 aa15.19■□□□□ 0.02
CTLA4-203ENST00000427473 LBX2Q6XYB7 198 aa15.19■□□□□ 0.02
CTLA4-203ENST00000427473 CYB5R4Q7L1T6 521 aa15.19■□□□□ 0.02
CTLA4-203ENST00000427473 MB21D2Q8IYB1 491 aaPredicted RBP15.19■□□□□ 0.02
CTLA4-203ENST00000427473 TTC14Q96N46 770 aa15.19■□□□□ 0.02
CTLA4-203ENST00000427473 ZSCAN10Q96SZ4 725 aaPredicted RBP15.19■□□□□ 0.02
CTLA4-203ENST00000427473 P2RX7Q99572 595 aaKnown RBP15.19■□□□□ 0.02
CTLA4-203ENST00000427473 ZKSCAN3Q9BRR0 538 aa15.19■□□□□ 0.02
CTLA4-203ENST00000427473 MYPNQ86TC9 1320 aa15.18■□□□□ 0.02
CTLA4-203ENST00000427473 SPDYE16A6NNV3 312 aaPredicted RBP15.18■□□□□ 0.02
CTLA4-203ENST00000427473 TOP1P11387 765 aaKnown RBP15.18■□□□□ 0.02
CTLA4-203ENST00000427473 FXR2P51116 673 aaKnown RBP eCLIP15.18■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms