RNA–Protein interactions for RNA: ENST00000427461.1

LSG1-202, Transcript of large 60S subunit nuclear export GTPase 1, humanhuman

TSL 5

Gene LSG1, Length 755 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSG1-202ENST00000427461 USP17L17D6RBQ6 530 aa11.43□□□□□ -0.58
LSG1-202ENST00000427461 USP17L19D6RCP7 530 aa11.43□□□□□ -0.58
LSG1-202ENST00000427461 USP17L20D6RJB6 530 aa11.43□□□□□ -0.58
LSG1-202ENST00000427461 VAMP4O75379 141 aa11.43□□□□□ -0.58
LSG1-202ENST00000427461 RARBP10826 455 aa11.43□□□□□ -0.58
LSG1-202ENST00000427461 MECOMQ03112 1051 aa11.43□□□□□ -0.58
LSG1-202ENST00000427461 USP17L24Q0WX57 530 aa11.43□□□□□ -0.58
LSG1-202ENST00000427461 PSRC1Q6PGN9 363 aaPredicted RBP11.43□□□□□ -0.58
LSG1-202ENST00000427461 CCDC174Q6PII3 467 aa11.43□□□□□ -0.58
LSG1-202ENST00000427461 CATSPERGQ6ZRH7 1159 aa11.43□□□□□ -0.58
LSG1-202ENST00000427461 OTOP2Q7RTS6 562 aa11.43□□□□□ -0.58
LSG1-202ENST00000427461 RNF180Q86T96 592 aa11.43□□□□□ -0.58
LSG1-202ENST00000427461 HLA-CQ95604 372 aa11.43□□□□□ -0.58
LSG1-202ENST00000427461 SRCIN1Q9C0H9 1055 aa11.43□□□□□ -0.58
LSG1-202ENST00000427461 STARD7Q9NQZ5 370 aa11.43□□□□□ -0.58
LSG1-202ENST00000427461 GNL3LQ9NVN8 582 aaKnown RBP11.43□□□□□ -0.58
LSG1-202ENST00000427461 ZBTB21Q9ULJ3 1066 aa11.43□□□□□ -0.58
LSG1-202ENST00000427461 A0A0G2JMZ2 1700 aa11.43□□□□□ -0.58
LSG1-202ENST00000427461 ZNF521Q96K83 1311 aa11.42□□□□□ -0.58
LSG1-202ENST00000427461 EYA2O00167 538 aa11.42□□□□□ -0.58
LSG1-202ENST00000427461 GTPBP6O43824 516 aaPredicted RBP11.42□□□□□ -0.58
LSG1-202ENST00000427461 TAL1P17542 331 aaPredicted RBP11.42□□□□□ -0.58
LSG1-202ENST00000427461 ADORA1P30542 326 aa11.42□□□□□ -0.58
LSG1-202ENST00000427461 CYP2C18P33260 490 aa11.42□□□□□ -0.58
LSG1-202ENST00000427461 ACLYP53396 1101 aa11.42□□□□□ -0.58
LSG1-202ENST00000427461 C1QBPQ07021 282 aaKnown RBP11.42□□□□□ -0.58
LSG1-202ENST00000427461 ATG9AQ7Z3C6 839 aa11.42□□□□□ -0.58
LSG1-202ENST00000427461 SLF2Q8IX21 1173 aa11.42□□□□□ -0.58
LSG1-202ENST00000427461 TMEM199Q8N511 208 aa11.42□□□□□ -0.58
LSG1-202ENST00000427461 ZGPATQ8N5A5 531 aaKnown RBP11.42□□□□□ -0.58
LSG1-202ENST00000427461 MOV10L1Q9BXT6 1211 aaKnown RBP11.42□□□□□ -0.58
LSG1-202ENST00000427461 CDK5RAP2Q96SN8 1893 aa11.42□□□□□ -0.58
LSG1-202ENST00000427461 SPDYE16A6NNV3 312 aaPredicted RBP11.41□□□□□ -0.58
LSG1-202ENST00000427461 ADAMTS4O75173 837 aa11.41□□□□□ -0.58
LSG1-202ENST00000427461 FGBP02675 491 aa11.41□□□□□ -0.58
LSG1-202ENST00000427461 POU3F3P20264 500 aaPredicted RBP11.41□□□□□ -0.58
LSG1-202ENST00000427461 IRX5P78411 483 aaPredicted RBP11.41□□□□□ -0.58
LSG1-202ENST00000427461 RASGRF1Q13972 1273 aa11.41□□□□□ -0.58
LSG1-202ENST00000427461 ATP2B3Q16720 1220 aa11.41□□□□□ -0.58
LSG1-202ENST00000427461 CSPP1Q1MSJ5 1256 aa11.41□□□□□ -0.58
LSG1-202ENST00000427461 MAML3Q96JK9 1138 aa11.41□□□□□ -0.58
LSG1-202ENST00000427461 C12orf42Q96LP6 360 aa11.41□□□□□ -0.58
LSG1-202ENST00000427461 IL23AQ9NPF7 189 aa11.41□□□□□ -0.58
LSG1-202ENST00000427461 PI4KBQ9UBF8 816 aa11.41□□□□□ -0.58
LSG1-202ENST00000427461 ZNFX1Q9P2E3 1918 aaKnown RBP11.41□□□□□ -0.58
LSG1-202ENST00000427461 UMODL1Q5DID0 1318 aa11.4□□□□□ -0.58
LSG1-202ENST00000427461 SEMA3EO15041 775 aa11.4□□□□□ -0.58
LSG1-202ENST00000427461 STRNO43815 780 aa11.4□□□□□ -0.58
LSG1-202ENST00000427461 VCAM1P19320 739 aa11.4□□□□□ -0.58
LSG1-202ENST00000427461 ERCC3P19447 782 aa11.4□□□□□ -0.58
LSG1-202ENST00000427461 RFX5P48382 616 aaPredicted RBP11.4□□□□□ -0.58
LSG1-202ENST00000427461 CCDC102BQ68D86 513 aa11.4□□□□□ -0.58
LSG1-202ENST00000427461 LBX2Q6XYB7 198 aa11.4□□□□□ -0.58
LSG1-202ENST00000427461 ERICH6Q7L0X2 663 aa11.4□□□□□ -0.58
LSG1-202ENST00000427461 TEX11Q8IYF3 940 aa11.4□□□□□ -0.58
LSG1-202ENST00000427461 GJD3Q8N144 294 aa11.4□□□□□ -0.58
LSG1-202ENST00000427461 SH3RF3Q8TEJ3 882 aaPredicted RBP11.4□□□□□ -0.58
LSG1-202ENST00000427461 FEZ1Q99689 392 aa11.4□□□□□ -0.58
LSG1-202ENST00000427461 MYADML2A6NDP7 307 aa11.39□□□□□ -0.59
LSG1-202ENST00000427461 GH2P01242 217 aa11.39□□□□□ -0.59
LSG1-202ENST00000427461 CDK7P50613 346 aa11.39□□□□□ -0.59
LSG1-202ENST00000427461 KCNA10Q16322 511 aa11.39□□□□□ -0.59
LSG1-202ENST00000427461 CRACR2BQ8N4Y2 399 aaPredicted RBP11.39□□□□□ -0.59
LSG1-202ENST00000427461 NUP133Q8WUM0 1156 aa11.39□□□□□ -0.59
LSG1-202ENST00000427461 CDCA7LQ96GN5 454 aa11.39□□□□□ -0.59
LSG1-202ENST00000427461 SIL1Q9H173 461 aa11.39□□□□□ -0.59
LSG1-202ENST00000427461 PCDHA11Q9Y5I1 949 aa11.39□□□□□ -0.59
LSG1-202ENST00000427461 ST18O60284 1047 aa11.38□□□□□ -0.59
LSG1-202ENST00000427461 ARHGEF15O94989 841 aa11.38□□□□□ -0.59
LSG1-202ENST00000427461 CA3P07451 260 aa11.38□□□□□ -0.59
LSG1-202ENST00000427461 ZNF865P0CJ78 1059 aaPredicted RBP11.38□□□□□ -0.59
LSG1-202ENST00000427461 SSTR3P32745 418 aaPredicted RBP11.38□□□□□ -0.59
LSG1-202ENST00000427461 SPTY2D1Q68D10 685 aaPredicted RBP11.38□□□□□ -0.59
LSG1-202ENST00000427461 CCSAPQ6IQ19 270 aaPredicted RBP11.38□□□□□ -0.59
LSG1-202ENST00000427461 FAM178BQ8IXR5 827 aa11.38□□□□□ -0.59
LSG1-202ENST00000427461 ACER1Q8TDN7 264 aa11.38□□□□□ -0.59
LSG1-202ENST00000427461 ARNTL2Q8WYA1 636 aa11.38□□□□□ -0.59
LSG1-202ENST00000427461 TSEN34Q9BSV6 310 aaKnown RBP11.38□□□□□ -0.59
LSG1-202ENST00000427461 SPATC1LQ9H0A9 340 aa11.38□□□□□ -0.59
LSG1-202ENST00000427461 KCNH6Q9H252 994 aa11.38□□□□□ -0.59
LSG1-202ENST00000427461 MTIF3Q9H2K0 278 aaKnown RBP11.38□□□□□ -0.59
LSG1-202ENST00000427461 RPAP3Q9H6T3 665 aaPredicted RBP11.38□□□□□ -0.59
LSG1-202ENST00000427461 PALD1Q9ULE6 856 aa11.38□□□□□ -0.59
LSG1-202ENST00000427461 SLC4A7Q9Y6M7 1214 aa11.38□□□□□ -0.59
LSG1-202ENST00000427461 ZNF318Q5VUA4 2279 aa11.38□□□□□ -0.59
LSG1-202ENST00000427461 FANCIQ9NVI1 1328 aa11.37□□□□□ -0.59
LSG1-202ENST00000427461 SYNRGQ9UMZ2 1314 aa11.37□□□□□ -0.59
LSG1-202ENST00000427461 ALADP13716 330 aa11.37□□□□□ -0.59
LSG1-202ENST00000427461 IL9P15248 144 aa11.37□□□□□ -0.59
LSG1-202ENST00000427461 CCL23P55773 120 aa11.37□□□□□ -0.59
LSG1-202ENST00000427461 EXOSC9Q06265 439 aaKnown RBP11.37□□□□□ -0.59
LSG1-202ENST00000427461 TBC1D9Q6ZT07 1266 aa11.37□□□□□ -0.59
LSG1-202ENST00000427461 SPRED2Q7Z698 418 aa11.37□□□□□ -0.59
LSG1-202ENST00000427461 METTL16Q86W50 562 aaKnown RBP11.37□□□□□ -0.59
LSG1-202ENST00000427461 NCAPG2Q86XI2 1143 aa11.37□□□□□ -0.59
LSG1-202ENST00000427461 MAPKAPK5Q8IW41 473 aa11.37□□□□□ -0.59
LSG1-202ENST00000427461 WWC1Q8IX03 1113 aa11.37□□□□□ -0.59
LSG1-202ENST00000427461 FAM126BQ8IXS8 530 aa11.37□□□□□ -0.59
LSG1-202ENST00000427461 KLHDC9Q8NEP7 349 aa11.37□□□□□ -0.59
LSG1-202ENST00000427461 NSUN4Q96CB9 384 aaKnown RBP11.37□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms