RNA–Protein interactions for RNA: ENST00000427183.6

HDLBP-214, Transcript of high density lipoprotein binding protein, humanhuman

TSL 2 BASIC

Gene HDLBP, Length 6,238 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-214ENST00000427183 TRIM35Q9UPQ4 493 aa13.86□□□□□ -0.19
HDLBP-214ENST00000427183 MTMR3Q13615 1198 aa13.86□□□□□ -0.19
HDLBP-214ENST00000427183 C4orf50Q6ZRC1 276 aa13.86□□□□□ -0.19
HDLBP-214ENST00000427183 MBD4O95243 580 aa13.86□□□□□ -0.19
HDLBP-214ENST00000427183 GSTA1P08263 222 aa13.86□□□□□ -0.19
HDLBP-214ENST00000427183 GSTA2P09210 222 aa13.86□□□□□ -0.19
HDLBP-214ENST00000427183 ADKP55263 362 aaKnown RBP13.86□□□□□ -0.19
HDLBP-214ENST00000427183 KRT28Q7Z3Y7 464 aa13.86□□□□□ -0.19
HDLBP-214ENST00000427183 FAM207AQ9NSI2 230 aaPredicted RBP13.86□□□□□ -0.19
HDLBP-214ENST00000427183 A6NNZ2 444 aa13.86□□□□□ -0.19
HDLBP-214ENST00000427183 GCNT3O95395 438 aa13.86□□□□□ -0.19
HDLBP-214ENST00000427183 ABCB4P21439 1286 aa13.86□□□□□ -0.19
HDLBP-214ENST00000427183 TUBB8Q3ZCM7 444 aa13.86□□□□□ -0.19
HDLBP-214ENST00000427183 MYCT1Q8N699 235 aa13.86□□□□□ -0.19
HDLBP-214ENST00000427183 C8orf58Q8NAV2 365 aa13.86□□□□□ -0.19
HDLBP-214ENST00000427183 RSAD2Q8WXG1 361 aa13.86□□□□□ -0.19
HDLBP-214ENST00000427183 LDHBP07195 334 aaKnown RBP13.85□□□□□ -0.19
HDLBP-214ENST00000427183 TUBB2AQ13885 445 aa13.85□□□□□ -0.19
HDLBP-214ENST00000427183 HERC4Q5GLZ8 1057 aaPredicted RBP13.85□□□□□ -0.19
HDLBP-214ENST00000427183 SMC5Q8IY18 1101 aa13.85□□□□□ -0.19
HDLBP-214ENST00000427183 SEPT8Q92599 483 aa13.85□□□□□ -0.19
HDLBP-214ENST00000427183 ABTB1Q969K4 478 aaPredicted RBP13.85□□□□□ -0.19
HDLBP-214ENST00000427183 NCAPGQ9BPX3 1015 aa13.85□□□□□ -0.19
HDLBP-214ENST00000427183 TUBB2BQ9BVA1 445 aa13.85□□□□□ -0.19
HDLBP-214ENST00000427183 ZC3H12CQ9C0D7 883 aaKnown RBP13.85□□□□□ -0.19
HDLBP-214ENST00000427183 KRT3P12035 628 aa13.85□□□□□ -0.19
HDLBP-214ENST00000427183 ATICP31939 592 aa13.85□□□□□ -0.19
HDLBP-214ENST00000427183 KIF22Q14807 665 aa13.85□□□□□ -0.19
HDLBP-214ENST00000427183 RRAGAQ7L523 313 aa13.85□□□□□ -0.19
HDLBP-214ENST00000427183 RPAINQ86UA6 219 aa13.85□□□□□ -0.19
HDLBP-214ENST00000427183 DPH5Q9H2P9 285 aa13.85□□□□□ -0.19
HDLBP-214ENST00000427183 BCAP29Q9UHQ4 241 aa13.85□□□□□ -0.19
HDLBP-214ENST00000427183 SEC24BO95487 1268 aa13.85□□□□□ -0.19
HDLBP-214ENST00000427183 LRCH2Q5VUJ6 765 aa13.85□□□□□ -0.19
HDLBP-214ENST00000427183 AP1ARQ63HQ0 302 aa13.85□□□□□ -0.19
HDLBP-214ENST00000427183 POMGNT1Q8WZA1 660 aa13.85□□□□□ -0.19
HDLBP-214ENST00000427183 PPP1R9AQ9ULJ8 1098 aa13.85□□□□□ -0.19
HDLBP-214ENST00000427183 V9GY48 417 aaPredicted RBP13.85□□□□□ -0.19
HDLBP-214ENST00000427183 EXOC3O60645 756 aa13.85□□□□□ -0.19
HDLBP-214ENST00000427183 APOEP02649 317 aa13.85□□□□□ -0.19
HDLBP-214ENST00000427183 SFMBT2Q5VUG0 894 aa13.85□□□□□ -0.19
HDLBP-214ENST00000427183 NOP9Q86U38 636 aaKnown RBP13.85□□□□□ -0.19
HDLBP-214ENST00000427183 NELFBQ8WX92 580 aa13.85□□□□□ -0.19
HDLBP-214ENST00000427183 ST7Q9NRC1 585 aa13.84□□□□□ -0.19
HDLBP-214ENST00000427183 PPFIA4O75335 1185 aa13.84□□□□□ -0.19
HDLBP-214ENST00000427183 TSTA3Q13630 321 aaPredicted RBP13.84□□□□□ -0.19
HDLBP-214ENST00000427183 SCYL2Q6P3W7 929 aa13.84□□□□□ -0.19
HDLBP-214ENST00000427183 CROCCP2Q86T23 111 aa13.84□□□□□ -0.19
HDLBP-214ENST00000427183 CERS3Q8IU89 383 aa13.84□□□□□ -0.19
HDLBP-214ENST00000427183 CHMP6Q96FZ7 201 aa13.84□□□□□ -0.19
HDLBP-214ENST00000427183 NUP58Q9BVL2 599 aa13.84□□□□□ -0.19
HDLBP-214ENST00000427183 HELLSQ9NRZ9 838 aa13.84□□□□□ -0.19
HDLBP-214ENST00000427183 CLTCL1P53675 1640 aa13.84□□□□□ -0.19
HDLBP-214ENST00000427183 SPHKAPQ2M3C7 1700 aa13.84□□□□□ -0.19
HDLBP-214ENST00000427183 TMTC1Q8IUR5 882 aa13.84□□□□□ -0.19
HDLBP-214ENST00000427183 NFE2L3Q9Y4A8 694 aa13.84□□□□□ -0.19
HDLBP-214ENST00000427183 MADDQ8WXG6 1647 aa13.84□□□□□ -0.19
HDLBP-214ENST00000427183 U2AF1L4Q8WU68 220 aaKnown RBP13.84□□□□□ -0.19
HDLBP-214ENST00000427183 NAP1L4Q99733 375 aaKnown RBP13.84□□□□□ -0.19
HDLBP-214ENST00000427183 AMOTL2Q9Y2J4 779 aa13.84□□□□□ -0.19
HDLBP-214ENST00000427183 WASLO00401 505 aaPredicted RBP13.84□□□□□ -0.19
HDLBP-214ENST00000427183 MAP3K21Q5TCX8 1036 aa13.84□□□□□ -0.19
HDLBP-214ENST00000427183 SYCE1Q8N0S2 351 aa13.84□□□□□ -0.19
HDLBP-214ENST00000427183 MYL10Q9BUA6 226 aa13.84□□□□□ -0.19
HDLBP-214ENST00000427183 BAG5Q9UL15 447 aa13.84□□□□□ -0.19
HDLBP-214ENST00000427183 BUB1O43683 1085 aa13.83□□□□□ -0.19
HDLBP-214ENST00000427183 ITKQ08881 620 aa13.83□□□□□ -0.19
HDLBP-214ENST00000427183 MMEL1Q495T6 779 aa13.83□□□□□ -0.19
HDLBP-214ENST00000427183 MRPL50Q8N5N7 158 aaKnown RBP13.83□□□□□ -0.19
HDLBP-214ENST00000427183 SNX29Q8TEQ0 813 aa13.83□□□□□ -0.19
HDLBP-214ENST00000427183 RIOK1Q9BRS2 568 aaKnown RBP13.83□□□□□ -0.19
HDLBP-214ENST00000427183 IFIH1Q9BYX4 1025 aaKnown RBP13.83□□□□□ -0.19
HDLBP-214ENST00000427183 ANLNQ9NQW6 1124 aa13.83□□□□□ -0.19
HDLBP-214ENST00000427183 ESYT2A0FGR8 921 aa13.83□□□□□ -0.2
HDLBP-214ENST00000427183 CHMLP26374 656 aa13.83□□□□□ -0.2
HDLBP-214ENST00000427183 IRX4P78413 519 aa13.83□□□□□ -0.2
HDLBP-214ENST00000427183 MRPL44Q9H9J2 332 aaKnown RBP13.83□□□□□ -0.2
HDLBP-214ENST00000427183 CLASP1Q7Z460 1538 aa13.83□□□□□ -0.2
HDLBP-214ENST00000427183 KCNK3O14649 394 aa13.83□□□□□ -0.2
HDLBP-214ENST00000427183 ADCY8P40145 1251 aa13.83□□□□□ -0.2
HDLBP-214ENST00000427183 NLRP12P59046 1061 aa13.83□□□□□ -0.2
HDLBP-214ENST00000427183 FOXD4Q12950 439 aaPredicted RBP13.83□□□□□ -0.2
HDLBP-214ENST00000427183 KSR2Q6VAB6 950 aa13.83□□□□□ -0.2
HDLBP-214ENST00000427183 C2CD5Q86YS7 1000 aa13.83□□□□□ -0.2
HDLBP-214ENST00000427183 EXOC7Q9UPT5 735 aa13.83□□□□□ -0.2
HDLBP-214ENST00000427183 NOP56O00567 594 aaKnown RBP13.83□□□□□ -0.2
HDLBP-214ENST00000427183 GADD45BO75293 160 aaPredicted RBP13.83□□□□□ -0.2
HDLBP-214ENST00000427183 ZNF202O95125 648 aa13.83□□□□□ -0.2
HDLBP-214ENST00000427183 USH1GQ495M9 461 aa13.83□□□□□ -0.2
HDLBP-214ENST00000427183 hCG_1642624A0A1W2PR95 340 aa13.83□□□□□ -0.2
HDLBP-214ENST00000427183 FLOT1O75955 427 aa13.83□□□□□ -0.2
HDLBP-214ENST00000427183 PRPF6O94906 941 aaKnown RBP13.82□□□□□ -0.2
HDLBP-214ENST00000427183 PPP1R2P41236 205 aa13.82□□□□□ -0.2
HDLBP-214ENST00000427183 HAUS3Q68CZ6 603 aa13.82□□□□□ -0.2
HDLBP-214ENST00000427183 RAB17Q9H0T7 212 aa13.82□□□□□ -0.2
HDLBP-214ENST00000427183 TTC21BQ7Z4L5 1316 aa13.82□□□□□ -0.2
HDLBP-214ENST00000427183 PRDM1O75626 825 aa13.82□□□□□ -0.2
HDLBP-214ENST00000427183 KMT5BQ4FZB7 885 aa13.82□□□□□ -0.2
HDLBP-214ENST00000427183 BCAS4Q8TDM0 211 aa13.82□□□□□ -0.2
HDLBP-214ENST00000427183 DESI2Q9BSY9 194 aa13.82□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 60.2 ms