RNA–Protein interactions for RNA: ENST00000427123.5

SNX17-202, Transcript of sorting nexin 17, humanhuman

TSL 2

Gene SNX17, Length 2,007 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX17-202ENST00000427123 IL17RBQ9NRM6 502 aa21.99■■□□□ 1.11
SNX17-202ENST00000427123 TCP11L1Q9NUJ3 509 aa21.99■■□□□ 1.11
SNX17-202ENST00000427123 GGA1Q9UJY5 639 aa21.99■■□□□ 1.11
SNX17-202ENST00000427123 TRPC5Q9UL62 973 aaPredicted RBP21.99■■□□□ 1.11
SNX17-202ENST00000427123 SERPINB2P05120 415 aa21.98■■□□□ 1.11
SNX17-202ENST00000427123 TNNT1P13805 278 aa21.98■■□□□ 1.11
SNX17-202ENST00000427123 RBM10P98175 930 aaKnown RBP21.98■■□□□ 1.11
SNX17-202ENST00000427123 USP49Q70CQ1 688 aa21.98■■□□□ 1.11
SNX17-202ENST00000427123 PDILTQ8N807 584 aa21.98■■□□□ 1.11
SNX17-202ENST00000427123 PNMA1Q8ND90 353 aa21.98■■□□□ 1.11
SNX17-202ENST00000427123 DYNLL2Q96FJ2 89 aa21.98■■□□□ 1.11
SNX17-202ENST00000427123 MKNK2Q9HBH9 465 aa21.98■■□□□ 1.11
SNX17-202ENST00000427123 CD209Q9NNX6 404 aa21.98■■□□□ 1.11
SNX17-202ENST00000427123 SERPINC1P01008 464 aa21.97■■□□□ 1.11
SNX17-202ENST00000427123 IL1R1P14778 569 aa21.97■■□□□ 1.11
SNX17-202ENST00000427123 CALML3P27482 149 aa21.97■■□□□ 1.11
SNX17-202ENST00000427123 GNAQP50148 359 aa21.97■■□□□ 1.11
SNX17-202ENST00000427123 ATP2C1P98194 919 aaPredicted RBP21.97■■□□□ 1.11
SNX17-202ENST00000427123 GRM4Q14833 912 aa21.97■■□□□ 1.11
SNX17-202ENST00000427123 SLC27A3Q5K4L6 730 aa21.97■■□□□ 1.11
SNX17-202ENST00000427123 SPATA20Q8TB22 786 aa21.97■■□□□ 1.11
SNX17-202ENST00000427123 SH3GLB2Q9NR46 395 aa21.97■■□□□ 1.11
SNX17-202ENST00000427123 RIOK3O14730 519 aaKnown RBP21.97■■□□□ 1.11
SNX17-202ENST00000427123 SFPQP23246 707 aaKnown RBP eCLIP21.97■■□□□ 1.11
SNX17-202ENST00000427123 UBASH3AP57075 661 aa21.97■■□□□ 1.11
SNX17-202ENST00000427123 TGFBRAP1Q8WUH2 860 aa21.97■■□□□ 1.11
SNX17-202ENST00000427123 WNT7AO00755 349 aa21.96■■□□□ 1.11
SNX17-202ENST00000427123 TSPY3P0CV98 308 aa21.96■■□□□ 1.11
SNX17-202ENST00000427123 TSPY8P0CW00 308 aa21.96■■□□□ 1.11
SNX17-202ENST00000427123 ZNF174Q15697 407 aa21.96■■□□□ 1.11
SNX17-202ENST00000427123 ARMCX5Q6P1M9 558 aa21.96■■□□□ 1.11
SNX17-202ENST00000427123 MTERF4Q7Z6M4 381 aaKnown RBP21.96■■□□□ 1.11
SNX17-202ENST00000427123 SYMPKQ92797 1274 aaKnown RBP21.96■■□□□ 1.11
SNX17-202ENST00000427123 LTBP1Q14766 1721 aa21.96■■□□□ 1.11
SNX17-202ENST00000427123 NRDCO43847 1150 aa21.96■■□□□ 1.11
SNX17-202ENST00000427123 SLFN14P0C7P3 912 aa21.96■■□□□ 1.11
SNX17-202ENST00000427123 NOM1Q5C9Z4 860 aaKnown RBP21.96■■□□□ 1.11
SNX17-202ENST00000427123 GRAMD1CQ8IYS0 662 aa21.96■■□□□ 1.11
SNX17-202ENST00000427123 DHX58Q96C10 678 aa21.96■■□□□ 1.11
SNX17-202ENST00000427123 PDCL3Q9H2J4 239 aa21.96■■□□□ 1.11
SNX17-202ENST00000427123 ZNF287Q9HBT7 754 aa21.96■■□□□ 1.11
SNX17-202ENST00000427123 FANCLQ9NW38 375 aa21.96■■□□□ 1.11
SNX17-202ENST00000427123 BBOX1O75936 387 aa21.95■■□□□ 1.1
SNX17-202ENST00000427123 BTDP43251 543 aa21.95■■□□□ 1.1
SNX17-202ENST00000427123 KCNJ6P48051 423 aa21.95■■□□□ 1.1
SNX17-202ENST00000427123 PIK3AP1Q6ZUJ8 805 aa21.95■■□□□ 1.1
SNX17-202ENST00000427123 ZNF444Q8N0Y2 327 aaPredicted RBP21.95■■□□□ 1.1
SNX17-202ENST00000427123 CCAR2Q8N163 923 aaKnown RBP21.95■■□□□ 1.1
SNX17-202ENST00000427123 EPSTI1Q96J88 318 aa21.95■■□□□ 1.1
SNX17-202ENST00000427123 PODXL2Q9NZ53 605 aa21.95■■□□□ 1.1
SNX17-202ENST00000427123 PAXBP1Q9Y5B6 917 aa21.95■■□□□ 1.1
SNX17-202ENST00000427123 A0A087X0B3 334 aa21.94■■□□□ 1.1
SNX17-202ENST00000427123 PLCG2P16885 1265 aa21.94■■□□□ 1.1
SNX17-202ENST00000427123 HOXA10P31260 410 aaPredicted RBP21.94■■□□□ 1.1
SNX17-202ENST00000427123 CFAP100Q494V2 611 aa21.94■■□□□ 1.1
SNX17-202ENST00000427123 SH3RF1Q7Z6J0 888 aa21.94■■□□□ 1.1
SNX17-202ENST00000427123 MAPKAPK5Q8IW41 473 aa21.94■■□□□ 1.1
SNX17-202ENST00000427123 ENOX1Q8TC92 643 aaKnown RBP21.94■■□□□ 1.1
SNX17-202ENST00000427123 FOCADQ5VW36 1801 aa21.94■■□□□ 1.1
SNX17-202ENST00000427123 GPR75-ASB3A0A0A6YYF3 556 aa21.94■■□□□ 1.1
SNX17-202ENST00000427123 USP27XA6NNY8 438 aa21.94■■□□□ 1.1
SNX17-202ENST00000427123 PTGDRQ13258 359 aa21.94■■□□□ 1.1
SNX17-202ENST00000427123 CT47A1Q5JQC4 288 aaPredicted RBP21.94■■□□□ 1.1
SNX17-202ENST00000427123 NYAP1Q6ZVC0 841 aa21.94■■□□□ 1.1
SNX17-202ENST00000427123 DPF2Q92785 391 aa21.94■■□□□ 1.1
SNX17-202ENST00000427123 SNED1Q8TER0 1413 aa21.93■■□□□ 1.1
SNX17-202ENST00000427123 PLCD1P51178 756 aa21.93■■□□□ 1.1
SNX17-202ENST00000427123 VSTM4Q8IW00 320 aa21.93■■□□□ 1.1
SNX17-202ENST00000427123 SLF2Q8IX21 1173 aa21.93■■□□□ 1.1
SNX17-202ENST00000427123 BLIDQ8IZY5 108 aa21.93■■□□□ 1.1
SNX17-202ENST00000427123 MAD2L2Q9UI95 211 aa21.93■■□□□ 1.1
SNX17-202ENST00000427123 BAZ2BQ9UIF8 2168 aaKnown RBP21.93■■□□□ 1.1
SNX17-202ENST00000427123 USP17L3A6NCW0 530 aa21.92■■□□□ 1.1
SNX17-202ENST00000427123 USP17L4A6NCW7 530 aa21.92■■□□□ 1.1
SNX17-202ENST00000427123 RASA1P20936 1047 aa21.92■■□□□ 1.1
SNX17-202ENST00000427123 ERCC5P28715 1186 aaPredicted RBP21.92■■□□□ 1.1
SNX17-202ENST00000427123 CEP135Q66GS9 1140 aa21.92■■□□□ 1.1
SNX17-202ENST00000427123 USP17L1Q7RTZ2 530 aa21.92■■□□□ 1.1
SNX17-202ENST00000427123 TBC1D22AQ8WUA7 517 aa21.92■■□□□ 1.1
SNX17-202ENST00000427123 PAGE5Q96GU1 130 aa21.92■■□□□ 1.1
SNX17-202ENST00000427123 CRAMP1Q96RY5 1269 aa21.92■■□□□ 1.1
SNX17-202ENST00000427123 PYM1Q9BRP8 204 aaKnown RBP21.92■■□□□ 1.1
SNX17-202ENST00000427123 SAP30BPQ9UHR5 308 aaKnown RBP21.92■■□□□ 1.1
SNX17-202ENST00000427123 PCDHA4Q9UN74 947 aa21.92■■□□□ 1.1
SNX17-202ENST00000427123 MYH1P12882 1939 aa21.92■■□□□ 1.1
SNX17-202ENST00000427123 VWA3AA6NCI4 1184 aa21.92■■□□□ 1.1
SNX17-202ENST00000427123 FMR1Q06787 632 aaKnown RBP eCLIP21.92■■□□□ 1.1
SNX17-202ENST00000427123 PTPN14Q15678 1187 aa21.92■■□□□ 1.1
SNX17-202ENST00000427123 ZNF827Q17R98 1081 aa21.92■■□□□ 1.1
SNX17-202ENST00000427123 TEX11Q8IYF3 940 aa21.92■■□□□ 1.1
SNX17-202ENST00000427123 STAG2Q8N3U4 1231 aa21.92■■□□□ 1.1
SNX17-202ENST00000427123 SLC44A5Q8NCS7 719 aa21.92■■□□□ 1.1
SNX17-202ENST00000427123 VEGFAP15692 232 aaPredicted RBP21.91■■□□□ 1.1
SNX17-202ENST00000427123 ZNF18P17022 549 aa21.91■■□□□ 1.1
SNX17-202ENST00000427123 DDR1Q08345 913 aa21.91■■□□□ 1.1
SNX17-202ENST00000427123 C16orf86Q6ZW13 317 aa21.91■■□□□ 1.1
SNX17-202ENST00000427123 FAM177A1Q8N128 213 aaPredicted RBP21.91■■□□□ 1.1
SNX17-202ENST00000427123 CCDC148Q8NFR7 591 aa21.91■■□□□ 1.1
SNX17-202ENST00000427123 TBC1D16Q8TBP0 767 aa21.91■■□□□ 1.1
SNX17-202ENST00000427123 FAM163AQ96GL9 167 aaPredicted RBP21.91■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms