RNA–Protein interactions for RNA: ENST00000427007.5

HDLBP-213, Transcript of high density lipoprotein binding protein, humanhuman

TSL 3

Gene HDLBP, Length 459 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-213ENST00000427007 ZBTB40Q9NUA8 1239 aa12.35□□□□□ -0.43
HDLBP-213ENST00000427007 PAG1Q9NWQ8 432 aa12.35□□□□□ -0.43
HDLBP-213ENST00000427007 IVNS1ABPQ9Y6Y0 642 aa12.35□□□□□ -0.43
HDLBP-213ENST00000427007 RLFQ13129 1914 aa12.35□□□□□ -0.43
HDLBP-213ENST00000427007 SLC15A5A6NIM6 579 aa12.34□□□□□ -0.43
HDLBP-213ENST00000427007 SMIM22K7EJ46 135 aa12.34□□□□□ -0.43
HDLBP-213ENST00000427007 RAB11FIP3O75154 756 aa12.34□□□□□ -0.43
HDLBP-213ENST00000427007 MBD4O95243 580 aa12.34□□□□□ -0.43
HDLBP-213ENST00000427007 COL6A1P12109 1028 aa12.34□□□□□ -0.43
HDLBP-213ENST00000427007 CNGA1P29973 690 aa12.34□□□□□ -0.43
HDLBP-213ENST00000427007 ADD2P35612 726 aa12.34□□□□□ -0.43
HDLBP-213ENST00000427007 GRB14Q14449 540 aa12.34□□□□□ -0.43
HDLBP-213ENST00000427007 KIAA1755Q5JYT7 1200 aa12.34□□□□□ -0.43
HDLBP-213ENST00000427007 MFSD14CQ5VZR4 134 aa12.34□□□□□ -0.43
HDLBP-213ENST00000427007 PARP14Q460N5 1801 aa12.34□□□□□ -0.43
HDLBP-213ENST00000427007 ZNF236Q9UL36 1845 aa12.33□□□□□ -0.44
HDLBP-213ENST00000427007 CYP2D7A0A087X1C5 515 aa12.33□□□□□ -0.44
HDLBP-213ENST00000427007 AKR1B1P15121 316 aa12.33□□□□□ -0.44
HDLBP-213ENST00000427007 CYP2C19P33261 490 aa12.33□□□□□ -0.44
HDLBP-213ENST00000427007 BMP8BP34820 402 aa12.33□□□□□ -0.44
HDLBP-213ENST00000427007 MAGEA10P43363 369 aaPredicted RBP12.33□□□□□ -0.44
HDLBP-213ENST00000427007 ATP2B2Q01814 1243 aa12.33□□□□□ -0.44
HDLBP-213ENST00000427007 COG2Q14746 738 aa12.33□□□□□ -0.44
HDLBP-213ENST00000427007 LRRC26Q2I0M4 334 aa12.33□□□□□ -0.44
HDLBP-213ENST00000427007 SAMD1Q6SPF0 538 aaPredicted RBP12.33□□□□□ -0.44
HDLBP-213ENST00000427007 TMEM179Q6ZVK1 233 aa12.33□□□□□ -0.44
HDLBP-213ENST00000427007 MOV10L1Q9BXT6 1211 aaKnown RBP12.33□□□□□ -0.44
HDLBP-213ENST00000427007 SWAP70Q9UH65 585 aa12.33□□□□□ -0.44
HDLBP-213ENST00000427007 COL11A1P12107 1806 aaPredicted RBP12.32□□□□□ -0.44
HDLBP-213ENST00000427007 ATP5JP18859 108 aa12.32□□□□□ -0.44
HDLBP-213ENST00000427007 ICA1Q05084 483 aa12.32□□□□□ -0.44
HDLBP-213ENST00000427007 DPP9Q86TI2 863 aa12.32□□□□□ -0.44
HDLBP-213ENST00000427007 SPICE1Q8N0Z3 855 aa12.32□□□□□ -0.44
HDLBP-213ENST00000427007 HAUS7Q99871 368 aa12.32□□□□□ -0.44
HDLBP-213ENST00000427007 DDX24Q9GZR7 859 aaKnown RBP eCLIP12.32□□□□□ -0.444e-7■□□□□ 9.9
HDLBP-213ENST00000427007 ARHGEF10LQ9HCE6 1279 aa12.32□□□□□ -0.44
HDLBP-213ENST00000427007 ATP8A2Q9NTI2 1148 aa12.32□□□□□ -0.44
HDLBP-213ENST00000427007 HOXC10Q9NYD6 342 aa12.32□□□□□ -0.44
HDLBP-213ENST00000427007 DDX20Q9UHI6 824 aaKnown RBP12.32□□□□□ -0.44
HDLBP-213ENST00000427007 SMARCA5O60264 1052 aaPredicted RBP12.31□□□□□ -0.44
HDLBP-213ENST00000427007 HOXC6P09630 235 aa12.31□□□□□ -0.44
HDLBP-213ENST00000427007 ERCC3P19447 782 aa12.31□□□□□ -0.44
HDLBP-213ENST00000427007 ADORA2AP29274 412 aa12.31□□□□□ -0.44
HDLBP-213ENST00000427007 CDK8P49336 464 aa12.31□□□□□ -0.44
HDLBP-213ENST00000427007 PLS1Q14651 629 aa12.31□□□□□ -0.44
HDLBP-213ENST00000427007 SIAH1Q8IUQ4 282 aa12.31□□□□□ -0.44
HDLBP-213ENST00000427007 TRPV1Q8NER1 839 aa12.31□□□□□ -0.44
HDLBP-213ENST00000427007 ATG4CQ96DT6 458 aa12.31□□□□□ -0.44
HDLBP-213ENST00000427007 UBE2OQ9C0C9 1292 aaKnown RBP12.31□□□□□ -0.44
HDLBP-213ENST00000427007 SENP6Q9GZR1 1112 aaPredicted RBP12.31□□□□□ -0.44
HDLBP-213ENST00000427007 SPATC1LQ9H0A9 340 aa12.31□□□□□ -0.44
HDLBP-213ENST00000427007 RCAN3Q9UKA8 241 aa12.31□□□□□ -0.44
HDLBP-213ENST00000427007 SLC4A4Q9Y6R1 1079 aa12.31□□□□□ -0.44
HDLBP-213ENST00000427007 USP17L12C9JPN9 530 aa12.3□□□□□ -0.44
HDLBP-213ENST00000427007 USP17L21D6R901 530 aa12.3□□□□□ -0.44
HDLBP-213ENST00000427007 FLOT1O75955 427 aa12.3□□□□□ -0.44
HDLBP-213ENST00000427007 DSG3P32926 999 aa12.3□□□□□ -0.44
HDLBP-213ENST00000427007 ATN1P54259 1190 aaPredicted RBP12.3□□□□□ -0.44
HDLBP-213ENST00000427007 MDM2Q00987 491 aaPredicted RBP12.3□□□□□ -0.44
HDLBP-213ENST00000427007 C20orf194Q5TEA3 1177 aa12.3□□□□□ -0.44
HDLBP-213ENST00000427007 C12orf60Q5U649 245 aa12.3□□□□□ -0.44
HDLBP-213ENST00000427007 ANO1Q5XXA6 986 aa12.3□□□□□ -0.44
HDLBP-213ENST00000427007 NCAPG2Q86XI2 1143 aa12.3□□□□□ -0.44
HDLBP-213ENST00000427007 AMOTL1Q8IY63 956 aa12.3□□□□□ -0.44
HDLBP-213ENST00000427007 TDHQ8IZJ6 230 aa12.3□□□□□ -0.44
HDLBP-213ENST00000427007 LPAR1Q92633 364 aa12.3□□□□□ -0.44
HDLBP-213ENST00000427007 LRRCC1Q9C099 1032 aa12.3□□□□□ -0.44
HDLBP-213ENST00000427007 PUS7LQ9H0K6 701 aaKnown RBP12.3□□□□□ -0.44
HDLBP-213ENST00000427007 CHMP4BQ9H444 224 aaKnown RBP12.3□□□□□ -0.44
HDLBP-213ENST00000427007 VCPKMTQ9H867 229 aa12.3□□□□□ -0.44
HDLBP-213ENST00000427007 TMX2Q9Y320 296 aa12.3□□□□□ -0.44
HDLBP-213ENST00000427007 STRNO43815 780 aa12.29□□□□□ -0.44
HDLBP-213ENST00000427007 RAD21O60216 631 aa12.29□□□□□ -0.44
HDLBP-213ENST00000427007 MSCO60682 206 aa12.29□□□□□ -0.44
HDLBP-213ENST00000427007 COBLO75128 1261 aa12.29□□□□□ -0.44
HDLBP-213ENST00000427007 CYBAP13498 195 aa12.29□□□□□ -0.44
HDLBP-213ENST00000427007 EEF2P13639 858 aaKnown RBP12.29□□□□□ -0.44
HDLBP-213ENST00000427007 UBE3CQ15386 1083 aa12.29□□□□□ -0.44
HDLBP-213ENST00000427007 GJC2Q5T442 439 aaPredicted RBP12.29□□□□□ -0.44
HDLBP-213ENST00000427007 C16orf86Q6ZW13 317 aa12.29□□□□□ -0.44
HDLBP-213ENST00000427007 STK11IPQ8N1F8 1099 aa12.29□□□□□ -0.44
HDLBP-213ENST00000427007 SHCBP1Q8NEM2 672 aa12.29□□□□□ -0.44
HDLBP-213ENST00000427007 DDRGK1Q96HY6 314 aa12.29□□□□□ -0.44
HDLBP-213ENST00000427007 SH2D4AQ9H788 454 aa12.29□□□□□ -0.44
HDLBP-213ENST00000427007 LAMA3Q16787 3333 aa12.29□□□□□ -0.44
HDLBP-213ENST00000427007 WDR46O15213 610 aaKnown RBP12.28□□□□□ -0.44
HDLBP-213ENST00000427007 IGHA2P01877 340 aa12.28□□□□□ -0.44
HDLBP-213ENST00000427007 MYCNP04198 464 aaPredicted RBP12.28□□□□□ -0.44
HDLBP-213ENST00000427007 TMEM132BQ14DG7 1078 aa12.28□□□□□ -0.44
HDLBP-213ENST00000427007 PRAMEF19Q5SWL8 479 aa12.28□□□□□ -0.44
HDLBP-213ENST00000427007 OLFML2BQ68BL8 750 aa12.28□□□□□ -0.44
HDLBP-213ENST00000427007 CTR9Q6PD62 1173 aa12.28□□□□□ -0.44
HDLBP-213ENST00000427007 Q7L0L9 218 aa12.28□□□□□ -0.44
HDLBP-213ENST00000427007 MB21D1Q8N884 522 aa12.28□□□□□ -0.44
HDLBP-213ENST00000427007 CCDC17Q96LX7 622 aa12.28□□□□□ -0.44
HDLBP-213ENST00000427007 FBXO28Q9NVF7 368 aa12.28□□□□□ -0.44
HDLBP-213ENST00000427007 ZNFX1Q9P2E3 1918 aaKnown RBP12.28□□□□□ -0.44
HDLBP-213ENST00000427007 PLXNA1Q9UIW2 1896 aa12.27□□□□□ -0.44
HDLBP-213ENST00000427007 GREB1LQ9C091 1923 aaPredicted RBP12.27□□□□□ -0.44
HDLBP-213ENST00000427007 DNM1LO00429 736 aa12.27□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms