RNA–Protein interactions for RNA: ENST00000426981.5

LIMS2-211, Transcript of LIM zinc finger domain containing 2, humanhuman

TSL 3

Gene LIMS2, Length 1,409 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-211ENST00000426981 DNAJC18Q9H819 358 aa20.57■□□□□ 0.88
LIMS2-211ENST00000426981 ZFYVE28Q9HCC9 887 aa20.57■□□□□ 0.88
LIMS2-211ENST00000426981 PICK1Q9NRD5 415 aa20.57■□□□□ 0.88
LIMS2-211ENST00000426981 AFG3L2Q9Y4W6 797 aa20.57■□□□□ 0.88
LIMS2-211ENST00000426981 TRIM17Q9Y577 477 aa20.57■□□□□ 0.88
LIMS2-211ENST00000426981 COL2A1P02458 1487 aaPredicted RBP20.57■□□□□ 0.88
LIMS2-211ENST00000426981 HTTP42858 3142 aa20.56■□□□□ 0.88
LIMS2-211ENST00000426981 VPS37CA5D8V6 355 aaPredicted RBP20.56■□□□□ 0.88
LIMS2-211ENST00000426981 CTNND1O60716 968 aaKnown RBP20.56■□□□□ 0.88
LIMS2-211ENST00000426981 PLCG2P16885 1265 aa20.56■□□□□ 0.88
LIMS2-211ENST00000426981 SP3Q02447 781 aa20.56■□□□□ 0.88
LIMS2-211ENST00000426981 GPAT2Q6NUI2 795 aa20.56■□□□□ 0.88
LIMS2-211ENST00000426981 ATAD5Q96QE3 1844 aa20.56■□□□□ 0.88
LIMS2-211ENST00000426981 PDE6AP16499 860 aa20.55■□□□□ 0.88
LIMS2-211ENST00000426981 RPS6KB1P23443 525 aa20.55■□□□□ 0.88
LIMS2-211ENST00000426981 PPIL4Q8WUA2 492 aaKnown RBP eCLIP20.55■□□□□ 0.88
LIMS2-211ENST00000426981 CFAP45Q9UL16 551 aa20.55■□□□□ 0.88
LIMS2-211ENST00000426981 PTPRFP10586 1907 aa20.55■□□□□ 0.88
LIMS2-211ENST00000426981 MYH1P12882 1939 aa20.55■□□□□ 0.88
LIMS2-211ENST00000426981 PDHXO00330 501 aa20.54■□□□□ 0.88
LIMS2-211ENST00000426981 SLC27A2O14975 620 aa20.54■□□□□ 0.88
LIMS2-211ENST00000426981 ME3Q16798 604 aa20.54■□□□□ 0.88
LIMS2-211ENST00000426981 SLC9C2Q5TAH2 1124 aa20.54■□□□□ 0.88
LIMS2-211ENST00000426981 GIMAP6Q6P9H5 292 aa20.54■□□□□ 0.88
LIMS2-211ENST00000426981 PDCL2Q8N4E4 241 aa20.54■□□□□ 0.88
LIMS2-211ENST00000426981 RIOK1Q9BRS2 568 aaKnown RBP20.54■□□□□ 0.88
LIMS2-211ENST00000426981 LLPHQ9BRT6 129 aaKnown RBP20.54■□□□□ 0.88
LIMS2-211ENST00000426981 ARHGAP39Q9C0H5 1083 aa20.54■□□□□ 0.88
LIMS2-211ENST00000426981 TNMDQ9H2S6 317 aa20.54■□□□□ 0.88
LIMS2-211ENST00000426981 CLSTN2Q9H4D0 955 aa20.54■□□□□ 0.88
LIMS2-211ENST00000426981 PI4KBQ9UBF8 816 aa20.54■□□□□ 0.88
LIMS2-211ENST00000426981 TCRBV5S4A2TA0A5A2 114 aa20.53■□□□□ 0.88
LIMS2-211ENST00000426981 TRIM75PA6NK02 468 aa20.53■□□□□ 0.88
LIMS2-211ENST00000426981 CXCL11O14625 94 aa20.53■□□□□ 0.88
LIMS2-211ENST00000426981 HMGB1P09429 215 aaKnown RBP20.53■□□□□ 0.88
LIMS2-211ENST00000426981 ATP5JP18859 108 aa20.53■□□□□ 0.88
LIMS2-211ENST00000426981 SOX10P56693 466 aa20.53■□□□□ 0.88
LIMS2-211ENST00000426981 PTH1RQ03431 593 aa20.53■□□□□ 0.88
LIMS2-211ENST00000426981 EVX2Q03828 476 aa20.53■□□□□ 0.88
LIMS2-211ENST00000426981 TYRO3Q06418 890 aa20.53■□□□□ 0.88
LIMS2-211ENST00000426981 ANKRD23Q86SG2 305 aa20.53■□□□□ 0.88
LIMS2-211ENST00000426981 ZNF532Q9HCE3 1301 aa20.53■□□□□ 0.88
LIMS2-211ENST00000426981 CPA4Q9UI42 421 aa20.53■□□□□ 0.88
LIMS2-211ENST00000426981 A0A0G2JLL6 359 aaPredicted RBP20.53■□□□□ 0.88
LIMS2-211ENST00000426981 TLR2O60603 784 aa20.53■□□□□ 0.88
LIMS2-211ENST00000426981 CAP2P40123 477 aa20.53■□□□□ 0.88
LIMS2-211ENST00000426981 USP5P45974 858 aa20.53■□□□□ 0.88
LIMS2-211ENST00000426981 PKN2Q16513 984 aaKnown RBP20.53■□□□□ 0.88
LIMS2-211ENST00000426981 FOXD4L6Q3SYB3 417 aaPredicted RBP20.53■□□□□ 0.88
LIMS2-211ENST00000426981 FBXO46Q6PJ61 603 aaPredicted RBP20.53■□□□□ 0.88
LIMS2-211ENST00000426981 FOXD4L3Q6VB84 417 aaPredicted RBP20.53■□□□□ 0.88
LIMS2-211ENST00000426981 GADL1Q6ZQY3 521 aa20.53■□□□□ 0.88
LIMS2-211ENST00000426981 PRRT2Q7Z6L0 340 aaPredicted RBP20.53■□□□□ 0.88
LIMS2-211ENST00000426981 ERO1AQ96HE7 468 aa20.53■□□□□ 0.88
LIMS2-211ENST00000426981 HAUS7Q99871 368 aa20.53■□□□□ 0.88
LIMS2-211ENST00000426981 TTC12Q9H892 705 aaPredicted RBP20.53■□□□□ 0.88
LIMS2-211ENST00000426981 PAG1Q9NWQ8 432 aa20.53■□□□□ 0.88
LIMS2-211ENST00000426981 PAXBP1Q9Y5B6 917 aa20.53■□□□□ 0.88
LIMS2-211ENST00000426981 CENPFP49454 3210 aa20.52■□□□□ 0.88
LIMS2-211ENST00000426981 CYP2C8P10632 490 aa20.52■□□□□ 0.87
LIMS2-211ENST00000426981 TTF1Q15361 905 aaPredicted RBP20.52■□□□□ 0.87
LIMS2-211ENST00000426981 SPATA32Q96LK8 384 aa20.52■□□□□ 0.87
LIMS2-211ENST00000426981 GTPBP4Q9BZE4 634 aaKnown RBP20.52■□□□□ 0.87
LIMS2-211ENST00000426981 DHX36Q9H2U1 1008 aaKnown RBP20.52■□□□□ 0.87
LIMS2-211ENST00000426981 U3KPZ7 1027 aaPredicted RBP20.52■□□□□ 0.87
LIMS2-211ENST00000426981 ADGRA2Q96PE1 1338 aa20.51■□□□□ 0.87
LIMS2-211ENST00000426981 MAGEB6P1A0A0J9YX57 407 aa20.51■□□□□ 0.87
LIMS2-211ENST00000426981 IGSF3O75054 1194 aa20.51■□□□□ 0.87
LIMS2-211ENST00000426981 GDF11O95390 407 aa20.51■□□□□ 0.87
LIMS2-211ENST00000426981 LARGE1O95461 756 aa20.51■□□□□ 0.87
LIMS2-211ENST00000426981 CTGFP29279 349 aa20.51■□□□□ 0.87
LIMS2-211ENST00000426981 SPP2Q13103 211 aa20.51■□□□□ 0.87
LIMS2-211ENST00000426981 C17orf99Q6UX52 265 aa20.51■□□□□ 0.87
LIMS2-211ENST00000426981 METTL16Q86W50 562 aaKnown RBP20.51■□□□□ 0.87
LIMS2-211ENST00000426981 FEZ1Q99689 392 aa20.51■□□□□ 0.87
LIMS2-211ENST00000426981 EFCC1Q9HA90 598 aa20.51■□□□□ 0.87
LIMS2-211ENST00000426981 ZCCHC17Q9NP64 241 aaKnown RBP20.51■□□□□ 0.87
LIMS2-211ENST00000426981 HERC5Q9UII4 1024 aaKnown RBP20.51■□□□□ 0.87
LIMS2-211ENST00000426981 TPCN1Q9ULQ1 816 aa20.51■□□□□ 0.87
LIMS2-211ENST00000426981 CTIFO43310 598 aaKnown RBP20.5■□□□□ 0.87
LIMS2-211ENST00000426981 NMIQ13287 307 aaPredicted RBP20.5■□□□□ 0.87
LIMS2-211ENST00000426981 ADCK5Q3MIX3 580 aa20.5■□□□□ 0.87
LIMS2-211ENST00000426981 TTC6Q86TZ1 520 aa20.5■□□□□ 0.87
LIMS2-211ENST00000426981 LCORLQ8N3X6 602 aa20.5■□□□□ 0.87
LIMS2-211ENST00000426981 FSD1Q9BTV5 496 aa20.5■□□□□ 0.87
LIMS2-211ENST00000426981 MRVI1Q9Y6F6 885 aa20.5■□□□□ 0.87
LIMS2-211ENST00000426981 TREML2Q5T2D2 321 aa20.49■□□□□ 0.87
LIMS2-211ENST00000426981 SARM1Q6SZW1 724 aa20.49■□□□□ 0.87
LIMS2-211ENST00000426981 FOXP4Q8IVH2 680 aaPredicted RBP20.49■□□□□ 0.87
LIMS2-211ENST00000426981 CRACR2BQ8N4Y2 399 aaPredicted RBP20.49■□□□□ 0.87
LIMS2-211ENST00000426981 RGS22Q8NE09 1264 aa20.49■□□□□ 0.87
LIMS2-211ENST00000426981 SDR42E1Q8WUS8 393 aa20.49■□□□□ 0.87
LIMS2-211ENST00000426981 PTPN22Q9Y2R2 807 aa20.49■□□□□ 0.87
LIMS2-211ENST00000426981 SMTNL1A8MU46 457 aa20.48■□□□□ 0.87
LIMS2-211ENST00000426981 PRKAB2O43741 272 aa20.48■□□□□ 0.87
LIMS2-211ENST00000426981 ADD2P35612 726 aa20.48■□□□□ 0.87
LIMS2-211ENST00000426981 PLCD1P51178 756 aa20.48■□□□□ 0.87
LIMS2-211ENST00000426981 PLA2G4DQ86XP0 818 aa20.48■□□□□ 0.87
LIMS2-211ENST00000426981 LEO1Q8WVC0 666 aaPredicted RBP20.48■□□□□ 0.87
LIMS2-211ENST00000426981 ARMT1Q9H993 441 aa20.48■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms