RNA–Protein interactions for RNA: ENST00000426922.6

LINC01517-201, Transcript of long intergenic non-protein coding RNA 1517, humanhuman

TSL 5 BASIC

Gene LINC01517, Length 980 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01517-201ENST00000426922 SEC24BO95487 1268 aa13.18□□□□□ -0.3
LINC01517-201ENST00000426922 TOP1P11387 765 aaKnown RBP13.18□□□□□ -0.3
LINC01517-201ENST00000426922 PSMA5P28066 241 aa13.18□□□□□ -0.3
LINC01517-201ENST00000426922 KLRC3Q07444 240 aa13.18□□□□□ -0.3
LINC01517-201ENST00000426922 KCNB2Q92953 911 aa13.18□□□□□ -0.3
LINC01517-201ENST00000426922 VCPKMTQ9H867 229 aa13.18□□□□□ -0.3
LINC01517-201ENST00000426922 AGTPBP1Q9UPW5 1226 aa13.18□□□□□ -0.3
LINC01517-201ENST00000426922 SNX14Q9Y5W7 946 aa13.18□□□□□ -0.3
LINC01517-201ENST00000426922 LAMA4Q16363 1823 aa13.18□□□□□ -0.3
LINC01517-201ENST00000426922 USP17L15C9J2P7 530 aa13.17□□□□□ -0.3
LINC01517-201ENST00000426922 USP17L13C9JLJ4 530 aa13.17□□□□□ -0.3
LINC01517-201ENST00000426922 USP17L11C9JVI0 530 aa13.17□□□□□ -0.3
LINC01517-201ENST00000426922 USP17L18D6R9N7 530 aa13.17□□□□□ -0.3
LINC01517-201ENST00000426922 USP17L22D6RA61 530 aa13.17□□□□□ -0.3
LINC01517-201ENST00000426922 USP17L17D6RBQ6 530 aa13.17□□□□□ -0.3
LINC01517-201ENST00000426922 USP17L19D6RCP7 530 aa13.17□□□□□ -0.3
LINC01517-201ENST00000426922 USP17L20D6RJB6 530 aa13.17□□□□□ -0.3
LINC01517-201ENST00000426922 PRC1O43663 620 aa13.17□□□□□ -0.3
LINC01517-201ENST00000426922 OSBPP22059 807 aa13.17□□□□□ -0.3
LINC01517-201ENST00000426922 USP17L24Q0WX57 530 aa13.17□□□□□ -0.3
LINC01517-201ENST00000426922 MOGSQ13724 837 aa13.17□□□□□ -0.3
LINC01517-201ENST00000426922 IFIT1BQ5T764 474 aaKnown RBP13.17□□□□□ -0.3
LINC01517-201ENST00000426922 GPAT2Q6NUI2 795 aa13.17□□□□□ -0.3
LINC01517-201ENST00000426922 CYB5R4Q7L1T6 521 aa13.17□□□□□ -0.3
LINC01517-201ENST00000426922 CHST3Q7LGC8 479 aa13.17□□□□□ -0.3
LINC01517-201ENST00000426922 SPICE1Q8N0Z3 855 aa13.17□□□□□ -0.3
LINC01517-201ENST00000426922 FAM43AQ8N2R8 423 aa13.17□□□□□ -0.3
LINC01517-201ENST00000426922 C12orf42Q96LP6 360 aa13.17□□□□□ -0.3
LINC01517-201ENST00000426922 JAKMIP1Q96N16 626 aaKnown RBP13.17□□□□□ -0.3
LINC01517-201ENST00000426922 KAT14Q9H8E8 782 aa13.17□□□□□ -0.3
LINC01517-201ENST00000426922 WBP1LQ9NX94 342 aa13.17□□□□□ -0.3
LINC01517-201ENST00000426922 RNF186Q9NXI6 227 aa13.17□□□□□ -0.3
LINC01517-201ENST00000426922 PNMA3Q9UL41 463 aa13.17□□□□□ -0.3
LINC01517-201ENST00000426922 SLC45A1Q9Y2W3 748 aa13.17□□□□□ -0.3
LINC01517-201ENST00000426922 TNKSO95271 1327 aa13.16□□□□□ -0.3
LINC01517-201ENST00000426922 NOVP48745 357 aa13.16□□□□□ -0.3
LINC01517-201ENST00000426922 IRX3P78415 501 aaPredicted RBP13.16□□□□□ -0.3
LINC01517-201ENST00000426922 FGD1P98174 961 aa13.16□□□□□ -0.3
LINC01517-201ENST00000426922 DGKZQ13574 1117 aa13.16□□□□□ -0.3
LINC01517-201ENST00000426922 TAF1CQ15572 869 aaPredicted RBP13.16□□□□□ -0.3
LINC01517-201ENST00000426922 ADCK5Q3MIX3 580 aa13.16□□□□□ -0.3
LINC01517-201ENST00000426922 TMEM67Q5HYA8 995 aa13.16□□□□□ -0.3
LINC01517-201ENST00000426922 TREML2Q5T2D2 321 aa13.16□□□□□ -0.3
LINC01517-201ENST00000426922 SLFN13Q68D06 897 aa13.16□□□□□ -0.3
LINC01517-201ENST00000426922 DHX32Q7L7V1 743 aaKnown RBP13.16□□□□□ -0.3
LINC01517-201ENST00000426922 MB21D2Q8IYB1 491 aaPredicted RBP13.16□□□□□ -0.3
LINC01517-201ENST00000426922 LRRC47Q8N1G4 583 aaKnown RBP13.16□□□□□ -0.3
LINC01517-201ENST00000426922 TMTC2Q8N394 836 aa13.16□□□□□ -0.3
LINC01517-201ENST00000426922 ENAHQ8N8S7 591 aaPredicted RBP13.16□□□□□ -0.3
LINC01517-201ENST00000426922 GMCL1P1Q8NEA9 526 aa13.16□□□□□ -0.3
LINC01517-201ENST00000426922 NKX2-3Q8TAU0 364 aa13.16□□□□□ -0.3
LINC01517-201ENST00000426922 TMEM87BQ96K49 555 aa13.16□□□□□ -0.3
LINC01517-201ENST00000426922 TMEM47Q9BQJ4 181 aa13.16□□□□□ -0.3
LINC01517-201ENST00000426922 MTA3Q9BTC8 594 aa13.16□□□□□ -0.3
LINC01517-201ENST00000426922 TANGO6Q9C0B7 1094 aa13.16□□□□□ -0.3
LINC01517-201ENST00000426922 RPAP3Q9H6T3 665 aaPredicted RBP13.16□□□□□ -0.3
LINC01517-201ENST00000426922 ZFYVE28Q9HCC9 887 aa13.16□□□□□ -0.3
LINC01517-201ENST00000426922 ISY1Q9ULR0 285 aaKnown RBP13.16□□□□□ -0.3
LINC01517-201ENST00000426922 MTMR7Q9Y216 660 aa13.16□□□□□ -0.3
LINC01517-201ENST00000426922 WDR46O15213 610 aaKnown RBP13.15□□□□□ -0.3
LINC01517-201ENST00000426922 VCAM1P19320 739 aa13.15□□□□□ -0.3
LINC01517-201ENST00000426922 HOXA7P31268 230 aaPredicted RBP13.15□□□□□ -0.3
LINC01517-201ENST00000426922 ANAPC15P60006 121 aa13.15□□□□□ -0.3
LINC01517-201ENST00000426922 WTAPQ15007 396 aa13.15□□□□□ -0.3
LINC01517-201ENST00000426922 RCSD1Q6JBY9 416 aa13.15□□□□□ -0.3
LINC01517-201ENST00000426922 BLOC1S2Q6QNY1 142 aa13.15□□□□□ -0.3
LINC01517-201ENST00000426922 SMCR8Q8TEV9 937 aaPredicted RBP13.15□□□□□ -0.3
LINC01517-201ENST00000426922 ANKS1AQ92625 1134 aa13.15□□□□□ -0.3
LINC01517-201ENST00000426922 PARK7Q99497 189 aaKnown RBP13.15□□□□□ -0.3
LINC01517-201ENST00000426922 SAGE1Q9NXZ1 904 aa13.15□□□□□ -0.3
LINC01517-201ENST00000426922 CYP46A1Q9Y6A2 500 aa13.15□□□□□ -0.3
LINC01517-201ENST00000426922 PHIPQ8WWQ0 1821 aa13.15□□□□□ -0.3
LINC01517-201ENST00000426922 TBC1D8O95759 1140 aa13.14□□□□□ -0.31
LINC01517-201ENST00000426922 NDUFB10O96000 172 aa13.14□□□□□ -0.31
LINC01517-201ENST00000426922 BMP3P12645 472 aa13.14□□□□□ -0.31
LINC01517-201ENST00000426922 CASTP20810 708 aaKnown RBP13.14□□□□□ -0.31
LINC01517-201ENST00000426922 SLC1A4P43007 532 aa13.14□□□□□ -0.31
LINC01517-201ENST00000426922 ANTXR2P58335 489 aa13.14□□□□□ -0.31
LINC01517-201ENST00000426922 COG2Q14746 738 aa13.14□□□□□ -0.31
LINC01517-201ENST00000426922 KIAA1755Q5JYT7 1200 aa13.14□□□□□ -0.31
LINC01517-201ENST00000426922 NFXL1Q6ZNB6 911 aa13.14□□□□□ -0.31
LINC01517-201ENST00000426922 CATSPERGQ6ZRH7 1159 aa13.14□□□□□ -0.31
LINC01517-201ENST00000426922 PNMA1Q8ND90 353 aa13.14□□□□□ -0.31
LINC01517-201ENST00000426922 IGDCC4Q8TDY8 1250 aa13.14□□□□□ -0.31
LINC01517-201ENST00000426922 CHMP4CQ96CF2 233 aa13.14□□□□□ -0.31
LINC01517-201ENST00000426922 TM6SF1Q9BZW5 370 aa13.14□□□□□ -0.31
LINC01517-201ENST00000426922 ASCC2Q9H1I8 757 aaPredicted RBP13.14□□□□□ -0.31
LINC01517-201ENST00000426922 HOXC10Q9NYD6 342 aa13.14□□□□□ -0.31
LINC01517-201ENST00000426922 WDR19Q8NEZ3 1342 aa13.13□□□□□ -0.31
LINC01517-201ENST00000426922 CCDC69A6NI79 296 aa13.13□□□□□ -0.31
LINC01517-201ENST00000426922 FLOT1O75955 427 aa13.13□□□□□ -0.31
LINC01517-201ENST00000426922 CYP2C8P10632 490 aa13.13□□□□□ -0.31
LINC01517-201ENST00000426922 EXOSC10Q01780 885 aaKnown RBP13.13□□□□□ -0.31
LINC01517-201ENST00000426922 IKQ13123 557 aaPredicted RBP13.13□□□□□ -0.31
LINC01517-201ENST00000426922 CRHR2Q13324 411 aa13.13□□□□□ -0.31
LINC01517-201ENST00000426922 SEC23AQ15436 765 aa13.13□□□□□ -0.31
LINC01517-201ENST00000426922 FAM83BQ5T0W9 1011 aa13.13□□□□□ -0.31
LINC01517-201ENST00000426922 SAMD1Q6SPF0 538 aaPredicted RBP13.13□□□□□ -0.31
LINC01517-201ENST00000426922 SYNE3Q6ZMZ3 975 aa13.13□□□□□ -0.31
LINC01517-201ENST00000426922 RUFY3Q7L099 469 aa13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms