RNA–Protein interactions for RNA: ENST00000426246.2

USP42-203, Transcript of ubiquitin specific peptidase 42, humanhuman

TSL 2

Gene USP42, Length 3,611 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP42-203ENST00000426246 KCTD19Q17RG1 926 aaPredicted RBP15.21■□□□□ 0.03
USP42-203ENST00000426246 AKT1S1Q96B36 256 aa15.21■□□□□ 0.03
USP42-203ENST00000426246 NLRP3Q96P20 1036 aa15.21■□□□□ 0.03
USP42-203ENST00000426246 ALDH8A1Q9H2A2 487 aaPredicted RBP15.21■□□□□ 0.03
USP42-203ENST00000426246 TSPY2A6NKD2 308 aa15.21■□□□□ 0.03
USP42-203ENST00000426246 ENC1O14682 589 aa15.21■□□□□ 0.03
USP42-203ENST00000426246 TPM1P09493 284 aa15.21■□□□□ 0.03
USP42-203ENST00000426246 UQCRFS1P1P0C7P4 283 aa15.21■□□□□ 0.03
USP42-203ENST00000426246 NAP1L1P55209 391 aaKnown RBP15.21■□□□□ 0.03
USP42-203ENST00000426246 ZNF654Q8IZM8 581 aa15.21■□□□□ 0.03
USP42-203ENST00000426246 STRBPQ96SI9 672 aaKnown RBP15.21■□□□□ 0.03
USP42-203ENST00000426246 LTBP1Q14766 1721 aa15.21■□□□□ 0.03
USP42-203ENST00000426246 XBP1P17861 261 aa15.21■□□□□ 0.02
USP42-203ENST00000426246 TTF1Q15361 905 aaPredicted RBP15.21■□□□□ 0.02
USP42-203ENST00000426246 PRR5LQ6MZQ0 368 aa15.21■□□□□ 0.02
USP42-203ENST00000426246 DHX37Q8IY37 1157 aaKnown RBP15.21■□□□□ 0.02
USP42-203ENST00000426246 EPB41L4AQ9HCS5 686 aaPredicted RBP15.21■□□□□ 0.02
USP42-203ENST00000426246 MAN1B1Q9UKM7 699 aa15.21■□□□□ 0.02
USP42-203ENST00000426246 TNKSO95271 1327 aa15.2■□□□□ 0.02
USP42-203ENST00000426246 TRIM75PA6NK02 468 aa15.2■□□□□ 0.02
USP42-203ENST00000426246 USP17L12C9JPN9 530 aa15.2■□□□□ 0.02
USP42-203ENST00000426246 USP17L21D6R901 530 aa15.2■□□□□ 0.02
USP42-203ENST00000426246 ZSCAN12O43309 604 aa15.2■□□□□ 0.02
USP42-203ENST00000426246 CTIFO43310 598 aaKnown RBP15.2■□□□□ 0.02
USP42-203ENST00000426246 RBM43Q6ZSC3 357 aaKnown RBP15.2■□□□□ 0.02
USP42-203ENST00000426246 ACRBPQ8NEB7 543 aa15.2■□□□□ 0.02
USP42-203ENST00000426246 GPR101Q96P66 508 aaPredicted RBP15.2■□□□□ 0.02
USP42-203ENST00000426246 SLF1Q9BQI6 1058 aa15.2■□□□□ 0.02
USP42-203ENST00000426246 SSBP05455 408 aaKnown RBP eCLIP15.2■□□□□ 0.02
USP42-203ENST00000426246 GOLGA8HP0CJ92 632 aa15.2■□□□□ 0.02
USP42-203ENST00000426246 NBPF3Q9H094 633 aa15.2■□□□□ 0.02
USP42-203ENST00000426246 RPS8P62241 208 aaKnown RBP15.19■□□□□ 0.02
USP42-203ENST00000426246 DDR1Q08345 913 aa15.19■□□□□ 0.02
USP42-203ENST00000426246 FILIP1LQ4L180 1135 aa15.19■□□□□ 0.02
USP42-203ENST00000426246 FEZ1Q99689 392 aa15.19■□□□□ 0.02
USP42-203ENST00000426246 DDX41Q9UJV9 622 aaKnown RBP15.19■□□□□ 0.02
USP42-203ENST00000426246 A0A1W2PQ27 194 aa15.19■□□□□ 0.02
USP42-203ENST00000426246 A0A1W2PQ64 194 aa15.19■□□□□ 0.02
USP42-203ENST00000426246 A0A1W2PQD8 194 aa15.19■□□□□ 0.02
USP42-203ENST00000426246 KLRK1P26718 216 aa15.19■□□□□ 0.02
USP42-203ENST00000426246 USP5P45974 858 aa15.19■□□□□ 0.02
USP42-203ENST00000426246 PPP2R3AQ06190 1150 aa15.19■□□□□ 0.02
USP42-203ENST00000426246 BMS1Q14692 1282 aaKnown RBP15.19■□□□□ 0.02
USP42-203ENST00000426246 CRY2Q49AN0 593 aa15.19■□□□□ 0.02
USP42-203ENST00000426246 SARM1Q6SZW1 724 aa15.19■□□□□ 0.02
USP42-203ENST00000426246 FANCBQ8NB91 859 aa15.19■□□□□ 0.02
USP42-203ENST00000426246 SUGCTQ9HAC7 445 aa15.19■□□□□ 0.02
USP42-203ENST00000426246 LY9Q9HBG7 655 aa15.19■□□□□ 0.02
USP42-203ENST00000426246 LRRC37AA6NMS7 1700 aa15.19■□□□□ 0.02
USP42-203ENST00000426246 UBE4AQ14139 1066 aa15.19■□□□□ 0.02
USP42-203ENST00000426246 NCAPHQ15003 741 aa15.19■□□□□ 0.02
USP42-203ENST00000426246 SAP30BPQ9UHR5 308 aaKnown RBP15.19■□□□□ 0.02
USP42-203ENST00000426246 MARCH6O60337 910 aa15.18■□□□□ 0.02
USP42-203ENST00000426246 UBE3CQ15386 1083 aa15.18■□□□□ 0.02
USP42-203ENST00000426246 CATIPQ7Z7H3 387 aa15.18■□□□□ 0.02
USP42-203ENST00000426246 CAGE1Q8TC20 777 aa15.18■□□□□ 0.02
USP42-203ENST00000426246 SYMPKQ92797 1274 aaKnown RBP15.18■□□□□ 0.02
USP42-203ENST00000426246 MAGEB6P1A0A0J9YX57 407 aa15.18■□□□□ 0.02
USP42-203ENST00000426246 PATL2C9JE40 543 aaKnown RBP15.18■□□□□ 0.02
USP42-203ENST00000426246 CYP2D6P10635 497 aa15.18■□□□□ 0.02
USP42-203ENST00000426246 CASP14P31944 242 aa15.18■□□□□ 0.02
USP42-203ENST00000426246 IQCA1Q86XH1 822 aa15.18■□□□□ 0.02
USP42-203ENST00000426246 ZHX3Q9H4I2 956 aa15.18■□□□□ 0.02
USP42-203ENST00000426246 POLRMTO00411 1230 aaKnown RBP15.18■□□□□ 0.02
USP42-203ENST00000426246 VEGFAP15692 232 aaPredicted RBP15.18■□□□□ 0.02
USP42-203ENST00000426246 RXRBP28702 533 aa15.18■□□□□ 0.02
USP42-203ENST00000426246 EIF6P56537 245 aaKnown RBP15.18■□□□□ 0.02
USP42-203ENST00000426246 TSR1Q2NL82 804 aaKnown RBP15.18■□□□□ 0.02
USP42-203ENST00000426246 EARS2Q5JPH6 523 aaKnown RBP15.18■□□□□ 0.02
USP42-203ENST00000426246 BRMS1Q9HCU9 246 aa15.18■□□□□ 0.02
USP42-203ENST00000426246 BMP6P22004 513 aa15.17■□□□□ 0.02
USP42-203ENST00000426246 PTPROQ16827 1216 aa15.17■□□□□ 0.02
USP42-203ENST00000426246 NYAP1Q6ZVC0 841 aa15.17■□□□□ 0.02
USP42-203ENST00000426246 CNBD1Q8NA66 436 aa15.17■□□□□ 0.02
USP42-203ENST00000426246 CTCFLQ8NI51 663 aaPredicted RBP15.17■□□□□ 0.02
USP42-203ENST00000426246 PP2D1A8MPX8 630 aa15.17■□□□□ 0.02
USP42-203ENST00000426246 RBL2Q08999 1139 aa15.17■□□□□ 0.02
USP42-203ENST00000426246 FAM84BQ96KN1 310 aaPredicted RBP15.17■□□□□ 0.02
USP42-203ENST00000426246 GTPBP4Q9BZE4 634 aaKnown RBP15.17■□□□□ 0.02
USP42-203ENST00000426246 KIF5CO60282 957 aa15.17■□□□□ 0.02
USP42-203ENST00000426246 CUTAO60888 179 aa15.17■□□□□ 0.02
USP42-203ENST00000426246 SPECC1LQ69YQ0 1117 aa15.17■□□□□ 0.02
USP42-203ENST00000426246 POTEAQ6S8J7 498 aa15.17■□□□□ 0.02
USP42-203ENST00000426246 TRMT1LQ7Z2T5 733 aaKnown RBP15.17■□□□□ 0.02
USP42-203ENST00000426246 PPARAQ07869 468 aa15.16■□□□□ 0.02
USP42-203ENST00000426246 PTGDRQ13258 359 aa15.16■□□□□ 0.02
USP42-203ENST00000426246 HEATR3Q7Z4Q2 680 aa15.16■□□□□ 0.02
USP42-203ENST00000426246 IGDCC4Q8TDY8 1250 aa15.16■□□□□ 0.02
USP42-203ENST00000426246 ESR2Q92731 530 aa15.16■□□□□ 0.02
USP42-203ENST00000426246 MCM9Q9NXL9 1143 aa15.16■□□□□ 0.02
USP42-203ENST00000426246 KIAA1551Q9HCM1 1747 aa15.16■□□□□ 0.02
USP42-203ENST00000426246 KLRG2A4D1S0 409 aaPredicted RBP15.16■□□□□ 0.02
USP42-203ENST00000426246 GSG1L2A8MUP6 293 aa15.16■□□□□ 0.02
USP42-203ENST00000426246 DNAJC21Q5F1R6 531 aaKnown RBP15.16■□□□□ 0.02
USP42-203ENST00000426246 COL11A2P13942 1736 aaPredicted RBP15.16■□□□□ 0.02
USP42-203ENST00000426246 F8W031 263 aaPredicted RBP15.16■□□□□ 0.02
USP42-203ENST00000426246 FBXO33Q7Z6M2 555 aa15.16■□□□□ 0.02
USP42-203ENST00000426246 WASF1Q92558 559 aa15.16■□□□□ 0.02
USP42-203ENST00000426246 TMEM87BQ96K49 555 aa15.16■□□□□ 0.02
USP42-203ENST00000426246 KRT23Q9C075 422 aa15.16■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms