RNA–Protein interactions for RNA: ENST00000426150.5

SSBP3-207, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 3

Gene SSBP3, Length 851 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-207ENST00000426150 PPP1R12AO14974 1030 aaPredicted RBP8.59□□□□□ -1.03
SSBP3-207ENST00000426150 TIAF1O95411 115 aa8.59□□□□□ -1.03
SSBP3-207ENST00000426150 FAM153BP0C7A2 387 aa8.59□□□□□ -1.03
SSBP3-207ENST00000426150 GYS2P54840 703 aa8.59□□□□□ -1.03
SSBP3-207ENST00000426150 PRAMEF13Q5VWM6 474 aa8.59□□□□□ -1.03
SSBP3-207ENST00000426150 IGF2-ASQ6U949 168 aa8.59□□□□□ -1.03
SSBP3-207ENST00000426150 LINC00114Q6XXX2 140 aa8.59□□□□□ -1.03
SSBP3-207ENST00000426150 DYMQ7RTS9 669 aa8.59□□□□□ -1.03
SSBP3-207ENST00000426150 ZC3HAV1Q7Z2W4 902 aaKnown RBP8.59□□□□□ -1.03
SSBP3-207ENST00000426150 PPFIBP1Q86W92 1011 aa8.59□□□□□ -1.03
SSBP3-207ENST00000426150 LRRC47Q8N1G4 583 aaKnown RBP8.59□□□□□ -1.03
SSBP3-207ENST00000426150 C12orf50Q8NA57 414 aaPredicted RBP8.59□□□□□ -1.03
SSBP3-207ENST00000426150 ZSWIM2Q8NEG5 633 aa8.59□□□□□ -1.03
SSBP3-207ENST00000426150 ZCRB1Q8TBF4 217 aaKnown RBP8.59□□□□□ -1.03
SSBP3-207ENST00000426150 CYB5D2Q8WUJ1 264 aa8.59□□□□□ -1.03
SSBP3-207ENST00000426150 PLVAPQ9BX97 442 aa8.59□□□□□ -1.03
SSBP3-207ENST00000426150 PIDD1Q9HB75 910 aa8.59□□□□□ -1.03
SSBP3-207ENST00000426150 ENAMQ9NRM1 1142 aa8.59□□□□□ -1.03
SSBP3-207ENST00000426150 ADCY3O60266 1144 aa8.58□□□□□ -1.04
SSBP3-207ENST00000426150 CST3P01034 146 aaPredicted RBP8.58□□□□□ -1.04
SSBP3-207ENST00000426150 IBSPP21815 317 aaPredicted RBP8.58□□□□□ -1.04
SSBP3-207ENST00000426150 ZNF385CQ66K41 422 aaPredicted RBP8.58□□□□□ -1.04
SSBP3-207ENST00000426150 SYNPOQ8N3V7 929 aa8.58□□□□□ -1.04
SSBP3-207ENST00000426150 BAHD1Q8TBE0 780 aaPredicted RBP8.58□□□□□ -1.04
SSBP3-207ENST00000426150 TMX1Q9H3N1 280 aa8.58□□□□□ -1.04
SSBP3-207ENST00000426150 FAM86C1Q9NVL1 165 aa8.58□□□□□ -1.04
SSBP3-207ENST00000426150 COL4A3BPQ9Y5P4 624 aa8.58□□□□□ -1.04
SSBP3-207ENST00000426150 ACTL7BQ9Y614 415 aa8.58□□□□□ -1.04
SSBP3-207ENST00000426150 CUL7Q14999 1698 aa8.58□□□□□ -1.04
SSBP3-207ENST00000426150 SPDYE3A6NKU9 549 aa8.57□□□□□ -1.04
SSBP3-207ENST00000426150 FAM229AH3BQW9 127 aa8.57□□□□□ -1.04
SSBP3-207ENST00000426150 RNGTTO60942 597 aaKnown RBP8.57□□□□□ -1.04
SSBP3-207ENST00000426150 ELNP15502 786 aa8.57□□□□□ -1.04
SSBP3-207ENST00000426150 GBP1P32455 592 aa8.57□□□□□ -1.04
SSBP3-207ENST00000426150 ASPAP45381 313 aa8.57□□□□□ -1.04
SSBP3-207ENST00000426150 HSPA2P54652 639 aa8.57□□□□□ -1.04
SSBP3-207ENST00000426150 SNRPNP63162 240 aaKnown RBP8.57□□□□□ -1.04
SSBP3-207ENST00000426150 IGBP1P78318 339 aa8.57□□□□□ -1.04
SSBP3-207ENST00000426150 TRIM28Q13263 835 aaKnown RBP8.57□□□□□ -1.04
SSBP3-207ENST00000426150 TCEA2Q15560 299 aa8.57□□□□□ -1.04
SSBP3-207ENST00000426150 LONRF2Q1L5Z9 754 aa8.57□□□□□ -1.04
SSBP3-207ENST00000426150 TAF7LQ5H9L4 462 aa8.57□□□□□ -1.04
SSBP3-207ENST00000426150 TMEM67Q5HYA8 995 aa8.57□□□□□ -1.04
SSBP3-207ENST00000426150 TDRD10Q5VZ19 366 aaKnown RBP8.57□□□□□ -1.04
SSBP3-207ENST00000426150 FDX2Q6P4F2 183 aa8.57□□□□□ -1.04
SSBP3-207ENST00000426150 ZBTB38Q8NAP3 1195 aaPredicted RBP8.57□□□□□ -1.04
SSBP3-207ENST00000426150 C2CD4AQ8NCU7 369 aaPredicted RBP8.57□□□□□ -1.04
SSBP3-207ENST00000426150 FAM105AQ9NUU6 356 aa8.57□□□□□ -1.04
SSBP3-207ENST00000426150 SUSD2Q9UGT4 822 aa8.57□□□□□ -1.04
SSBP3-207ENST00000426150 NOP58Q9Y2X3 529 aaKnown RBP8.57□□□□□ -1.04
SSBP3-207ENST00000426150 EPRSP07814 1512 aaKnown RBP8.57□□□□□ -1.04
SSBP3-207ENST00000426150 KIAA0586Q9BVV6 1533 aa8.57□□□□□ -1.04
SSBP3-207ENST00000426150 KIF21BO75037 1637 aa8.57□□□□□ -1.04
SSBP3-207ENST00000426150 MAP3K4Q9Y6R4 1608 aa8.57□□□□□ -1.04
SSBP3-207ENST00000426150 PTPRMP28827 1452 aa8.57□□□□□ -1.04
SSBP3-207ENST00000426150 ARID4BQ4LE39 1312 aaPredicted RBP8.56□□□□□ -1.04
SSBP3-207ENST00000426150 CARMIL2Q6F5E8 1435 aa8.56□□□□□ -1.04
SSBP3-207ENST00000426150 C9IYK1 514 aa8.56□□□□□ -1.04
SSBP3-207ENST00000426150 GNB5O14775 395 aa8.56□□□□□ -1.04
SSBP3-207ENST00000426150 CLEC3AO75596 197 aa8.56□□□□□ -1.04
SSBP3-207ENST00000426150 ASMTLO95671 621 aa8.56□□□□□ -1.04
SSBP3-207ENST00000426150 TP53P04637 393 aaPredicted RBP8.56□□□□□ -1.04
SSBP3-207ENST00000426150 LORP23490 312 aaPredicted RBP8.56□□□□□ -1.04
SSBP3-207ENST00000426150 ZNF143P52747 638 aaPredicted RBP8.56□□□□□ -1.04
SSBP3-207ENST00000426150 ANKRD34AQ69YU3 496 aa8.56□□□□□ -1.04
SSBP3-207ENST00000426150 SMYD4Q8IYR2 804 aaPredicted RBP8.56□□□□□ -1.04
SSBP3-207ENST00000426150 SVOPQ8N4V2 548 aa8.56□□□□□ -1.04
SSBP3-207ENST00000426150 SGSM3Q96HU1 749 aa8.56□□□□□ -1.04
SSBP3-207ENST00000426150 SLC26A8Q96RN1 970 aa8.56□□□□□ -1.04
SSBP3-207ENST00000426150 FOXQ1Q9C009 403 aa8.56□□□□□ -1.04
SSBP3-207ENST00000426150 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP8.56□□□□□ -1.047e-6■■■■□ 19.6
SSBP3-207ENST00000426150 SSU72Q9NP77 194 aaKnown RBP8.56□□□□□ -1.04
SSBP3-207ENST00000426150 PCDH12Q9NPG4 1184 aa8.56□□□□□ -1.04
SSBP3-207ENST00000426150 TNIKQ9UKE5 1360 aa8.56□□□□□ -1.04
SSBP3-207ENST00000426150 ANKRD34BA5PLL1 514 aa8.55□□□□□ -1.04
SSBP3-207ENST00000426150 AGRPO00253 132 aa8.55□□□□□ -1.04
SSBP3-207ENST00000426150 EPHX1P07099 455 aa8.55□□□□□ -1.04
SSBP3-207ENST00000426150 NAT2P11245 290 aa8.55□□□□□ -1.04
SSBP3-207ENST00000426150 SV2CQ496J9 727 aa8.55□□□□□ -1.04
SSBP3-207ENST00000426150 AXDND1Q5T1B0 1012 aaPredicted RBP8.55□□□□□ -1.04
SSBP3-207ENST00000426150 PHF6Q8IWS0 365 aaKnown RBP eCLIP8.55□□□□□ -1.04
SSBP3-207ENST00000426150 AGGF1Q8N302 714 aaeCLIP8.55□□□□□ -1.042e-6■□□□□ 9.7
SSBP3-207ENST00000426150 HAUS7Q99871 368 aa8.55□□□□□ -1.04
SSBP3-207ENST00000426150 SPATA31D1Q6ZQQ2 1576 aa8.55□□□□□ -1.04
SSBP3-207ENST00000426150 PCF11O94913 1555 aaKnown RBP8.54□□□□□ -1.04
SSBP3-207ENST00000426150 F8W735 103 aaPredicted RBP8.54□□□□□ -1.04
SSBP3-207ENST00000426150 ANAPC15P60006 121 aa8.54□□□□□ -1.04
SSBP3-207ENST00000426150 ZC3H12BQ5HYM0 836 aaKnown RBP8.54□□□□□ -1.04
SSBP3-207ENST00000426150 ARMCX6Q7L4S7 300 aa8.54□□□□□ -1.04
SSBP3-207ENST00000426150 TMEM130Q8N3G9 435 aa8.54□□□□□ -1.04
SSBP3-207ENST00000426150 XAGE3Q8WTP9 111 aa8.54□□□□□ -1.04
SSBP3-207ENST00000426150 SMARCC1Q92922 1105 aaPredicted RBP8.54□□□□□ -1.04
SSBP3-207ENST00000426150 CWC22Q9HCG8 908 aaKnown RBP8.54□□□□□ -1.04
SSBP3-207ENST00000426150 CD2APQ9Y5K6 639 aa8.54□□□□□ -1.04
SSBP3-207ENST00000426150 A0A1W2PQU0 124 aa8.53□□□□□ -1.04
SSBP3-207ENST00000426150 PIK3R2O00459 728 aa8.53□□□□□ -1.04
SSBP3-207ENST00000426150 CBFA2T2O43439 604 aa8.53□□□□□ -1.04
SSBP3-207ENST00000426150 LRIG2O94898 1065 aa8.53□□□□□ -1.04
SSBP3-207ENST00000426150 MASP1P48740 699 aa8.53□□□□□ -1.04
SSBP3-207ENST00000426150 DALRD3Q5D0E6 543 aaKnown RBP8.53□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms