RNA–Protein interactions for RNA: ENST00000425443.6

COL12A1-205, Transcript of collagen type XII alpha 1 chain, humanhuman

TSL 5

Gene COL12A1, Length 3,135 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-205ENST00000425443 TC2NQ8N9U0 490 aa14.77□□□□□ -0.05
COL12A1-205ENST00000425443 RNF217Q8TC41 542 aa14.77□□□□□ -0.05
COL12A1-205ENST00000425443 PRDM16Q9HAZ2 1276 aa14.77□□□□□ -0.05
COL12A1-205ENST00000425443 NFE2L3Q9Y4A8 694 aa14.77□□□□□ -0.05
COL12A1-205ENST00000425443 ARAP2Q8WZ64 1704 aa14.76□□□□□ -0.05
COL12A1-205ENST00000425443 TADA3O75528 432 aa14.76□□□□□ -0.05
COL12A1-205ENST00000425443 PNMA6AP0CW24 399 aaPredicted RBP14.76□□□□□ -0.05
COL12A1-205ENST00000425443 MECOMQ03112 1051 aa14.76□□□□□ -0.05
COL12A1-205ENST00000425443 EVX2Q03828 476 aa14.76□□□□□ -0.05
COL12A1-205ENST00000425443 PPP2R5BQ15173 497 aa14.76□□□□□ -0.05
COL12A1-205ENST00000425443 FAM182BQ5T319 152 aa14.76□□□□□ -0.05
COL12A1-205ENST00000425443 DZIP1Q86YF9 867 aaKnown RBP14.76□□□□□ -0.05
COL12A1-205ENST00000425443 SMYD4Q8IYR2 804 aaPredicted RBP14.76□□□□□ -0.05
COL12A1-205ENST00000425443 CTCFLQ8NI51 663 aaPredicted RBP14.76□□□□□ -0.05
COL12A1-205ENST00000425443 CCDC34Q96HJ3 373 aa14.76□□□□□ -0.05
COL12A1-205ENST00000425443 RNF26Q9BY78 433 aaPredicted RBP14.76□□□□□ -0.05
COL12A1-205ENST00000425443 IRX2Q9BZI1 471 aaPredicted RBP14.76□□□□□ -0.05
COL12A1-205ENST00000425443 ANKRD2Q9GZV1 360 aa14.76□□□□□ -0.05
COL12A1-205ENST00000425443 BRIP1Q9BX63 1249 aa14.76□□□□□ -0.05
COL12A1-205ENST00000425443 ANKIB1Q9P2G1 1089 aa14.76□□□□□ -0.05
COL12A1-205ENST00000425443 ANAPC4Q9UJX5 808 aa14.76□□□□□ -0.05
COL12A1-205ENST00000425443 RTCBQ9Y3I0 505 aaKnown RBP14.76□□□□□ -0.05
COL12A1-205ENST00000425443 COL22A1Q8NFW1 1626 aaPredicted RBP14.75□□□□□ -0.05
COL12A1-205ENST00000425443 A0A087X0B3 334 aa14.75□□□□□ -0.05
COL12A1-205ENST00000425443 TSPY2A6NKD2 308 aa14.75□□□□□ -0.05
COL12A1-205ENST00000425443 WNT7AO00755 349 aa14.75□□□□□ -0.05
COL12A1-205ENST00000425443 ZRANB2O95218 330 aaKnown RBP eCLIP14.75□□□□□ -0.05
COL12A1-205ENST00000425443 ZNF18P17022 549 aa14.75□□□□□ -0.05
COL12A1-205ENST00000425443 KRT2P35908 639 aa14.75□□□□□ -0.05
COL12A1-205ENST00000425443 GTF2A1P52655 376 aaPredicted RBP14.75□□□□□ -0.05
COL12A1-205ENST00000425443 POSTNQ15063 836 aa14.75□□□□□ -0.05
COL12A1-205ENST00000425443 EARS2Q5JPH6 523 aaKnown RBP14.75□□□□□ -0.05
COL12A1-205ENST00000425443 FAM47AQ5JRC9 791 aa14.75□□□□□ -0.05
COL12A1-205ENST00000425443 CTR9Q6PD62 1173 aa14.75□□□□□ -0.05
COL12A1-205ENST00000425443 PTF1AQ7RTS3 328 aa14.75□□□□□ -0.05
COL12A1-205ENST00000425443 TRIM75PA6NK02 468 aa14.75□□□□□ -0.05
COL12A1-205ENST00000425443 CBFA2T2O43439 604 aa14.75□□□□□ -0.05
COL12A1-205ENST00000425443 TOM1O60784 492 aa14.75□□□□□ -0.05
COL12A1-205ENST00000425443 RCAN1P53805 252 aa14.75□□□□□ -0.05
COL12A1-205ENST00000425443 SEC23AQ15436 765 aa14.75□□□□□ -0.05
COL12A1-205ENST00000425443 NOM1Q5C9Z4 860 aaKnown RBP14.75□□□□□ -0.05
COL12A1-205ENST00000425443 TAF1P21675 1872 aa14.75□□□□□ -0.05
COL12A1-205ENST00000425443 DOCK2Q92608 1830 aa14.75□□□□□ -0.05
COL12A1-205ENST00000425443 WNK3Q9BYP7 1800 aa14.75□□□□□ -0.05
COL12A1-205ENST00000425443 CCDC66A2RUB6 948 aa14.75□□□□□ -0.05
COL12A1-205ENST00000425443 PLEKHA8P1O95397 391 aa14.75□□□□□ -0.05
COL12A1-205ENST00000425443 CALM1P0DP23 149 aa14.75□□□□□ -0.05
COL12A1-205ENST00000425443 CALM2P0DP24 149 aa14.75□□□□□ -0.05
COL12A1-205ENST00000425443 CALM3P0DP25 149 aa14.75□□□□□ -0.05
COL12A1-205ENST00000425443 PRDX5P30044 214 aa14.75□□□□□ -0.05
COL12A1-205ENST00000425443 SMARCE1Q969G3 411 aa14.75□□□□□ -0.05
COL12A1-205ENST00000425443 NSUN4Q96CB9 384 aaKnown RBP14.75□□□□□ -0.05
COL12A1-205ENST00000425443 EPSTI1Q96J88 318 aa14.75□□□□□ -0.05
COL12A1-205ENST00000425443 CSRNP2Q9H175 543 aa14.75□□□□□ -0.05
COL12A1-205ENST00000425443 RBM28Q9NW13 759 aaKnown RBP14.75□□□□□ -0.05
COL12A1-205ENST00000425443 NARFQ9UHQ1 456 aa14.75□□□□□ -0.05
COL12A1-205ENST00000425443 CCNL1Q9UK58 526 aaPredicted RBP14.75□□□□□ -0.05
COL12A1-205ENST00000425443 PHLPP1O60346 1717 aa14.74□□□□□ -0.05
COL12A1-205ENST00000425443 SEMA3EO15041 775 aa14.74□□□□□ -0.05
COL12A1-205ENST00000425443 SASH3O75995 380 aa14.74□□□□□ -0.05
COL12A1-205ENST00000425443 PTPREP23469 700 aa14.74□□□□□ -0.05
COL12A1-205ENST00000425443 SARSP49591 514 aaKnown RBP14.74□□□□□ -0.05
COL12A1-205ENST00000425443 PSMD1Q99460 953 aa14.74□□□□□ -0.05
COL12A1-205ENST00000425443 KARSQ15046 597 aaKnown RBP14.74□□□□□ -0.05
COL12A1-205ENST00000425443 BAG1Q99933 345 aaPredicted RBP14.74□□□□□ -0.05
COL12A1-205ENST00000425443 ZSWIM4Q9H7M6 989 aa14.74□□□□□ -0.05
COL12A1-205ENST00000425443 MCM9Q9NXL9 1143 aa14.74□□□□□ -0.05
COL12A1-205ENST00000425443 TEX33O43247 280 aa14.73□□□□□ -0.05
COL12A1-205ENST00000425443 ACTN4O43707 911 aaKnown RBP14.73□□□□□ -0.05
COL12A1-205ENST00000425443 RPS6KA4O75676 772 aa14.73□□□□□ -0.05
COL12A1-205ENST00000425443 MORC3Q14149 939 aa14.73□□□□□ -0.05
COL12A1-205ENST00000425443 FBXO33Q7Z6M2 555 aa14.73□□□□□ -0.05
COL12A1-205ENST00000425443 KIFC2Q96AC6 838 aa14.73□□□□□ -0.05
COL12A1-205ENST00000425443 MRPL44Q9H9J2 332 aaKnown RBP14.73□□□□□ -0.05
COL12A1-205ENST00000425443 NMT2O60551 498 aa14.73□□□□□ -0.05
COL12A1-205ENST00000425443 CD44P16070 742 aaKnown RBP14.73□□□□□ -0.05
COL12A1-205ENST00000425443 USP5P45974 858 aa14.73□□□□□ -0.05
COL12A1-205ENST00000425443 ZNF174Q15697 407 aa14.73□□□□□ -0.05
COL12A1-205ENST00000425443 MNS1Q8NEH6 495 aa14.73□□□□□ -0.05
COL12A1-205ENST00000425443 UBXN4Q92575 508 aa14.73□□□□□ -0.05
COL12A1-205ENST00000425443 DACH1Q9UI36 760 aa14.73□□□□□ -0.05
COL12A1-205ENST00000425443 COL4A1P02462 1669 aa14.73□□□□□ -0.05
COL12A1-205ENST00000425443 CNTNAP4Q9C0A0 1308 aa14.73□□□□□ -0.05
COL12A1-205ENST00000425443 RFC4P35249 363 aa14.72□□□□□ -0.05
COL12A1-205ENST00000425443 SLC10A5Q5PT55 438 aa14.72□□□□□ -0.05
COL12A1-205ENST00000425443 SRPRBQ9Y5M8 271 aaKnown RBP14.72□□□□□ -0.05
COL12A1-205ENST00000425443 MYH2Q9UKX2 1941 aa14.72□□□□□ -0.05
COL12A1-205ENST00000425443 COL1A1P02452 1464 aaPredicted RBP14.72□□□□□ -0.05
COL12A1-205ENST00000425443 PCP11498 1178 aaKnown RBP14.72□□□□□ -0.05
COL12A1-205ENST00000425443 NLRP5P59047 1200 aa14.72□□□□□ -0.05
COL12A1-205ENST00000425443 GNG11P61952 73 aa14.72□□□□□ -0.05
COL12A1-205ENST00000425443 DHX8Q14562 1220 aaKnown RBP14.72□□□□□ -0.05
COL12A1-205ENST00000425443 NT5DC1Q5TFE4 455 aa14.72□□□□□ -0.05
COL12A1-205ENST00000425443 APTXQ7Z2E3 356 aaKnown RBP14.72□□□□□ -0.05
COL12A1-205ENST00000425443 DCP1AQ9NPI6 582 aaPredicted RBP14.72□□□□□ -0.05
COL12A1-205ENST00000425443 NID2Q14112 1375 aa14.72□□□□□ -0.05
COL12A1-205ENST00000425443 BAZ2AQ9UIF9 1905 aaKnown RBP14.72□□□□□ -0.05
COL12A1-205ENST00000425443 SOWAHDA6NJG2 315 aa14.72□□□□□ -0.05
COL12A1-205ENST00000425443 ARHGAP6O43182 974 aa14.72□□□□□ -0.05
COL12A1-205ENST00000425443 PRPF3O43395 683 aaKnown RBP14.72□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms