RNA–Protein interactions for RNA: ENST00000425072.5

MDC1-205, Transcript of mediator of DNA damage checkpoint 1, humanhuman

TSL 3

Gene MDC1, Length 582 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDC1-205ENST00000425072 ZNF112Q9UJU3 913 aa12.03□□□□□ -0.48
MDC1-205ENST00000425072 HPS5Q9UPZ3 1129 aa12.03□□□□□ -0.48
MDC1-205ENST00000425072 WDR90Q96KV7 1748 aa12.03□□□□□ -0.48
MDC1-205ENST00000425072 EEF2P13639 858 aaKnown RBP12.02□□□□□ -0.49
MDC1-205ENST00000425072 SEPT2Q15019 361 aa12.02□□□□□ -0.49
MDC1-205ENST00000425072 LARP1BQ659C4 914 aaKnown RBP12.02□□□□□ -0.49
MDC1-205ENST00000425072 TRIM22Q8IYM9 498 aa12.02□□□□□ -0.49
MDC1-205ENST00000425072 JMYQ8N9B5 988 aa12.02□□□□□ -0.49
MDC1-205ENST00000425072 SMARCC2Q8TAQ2 1214 aa12.02□□□□□ -0.49
MDC1-205ENST00000425072 WASF1Q92558 559 aa12.02□□□□□ -0.49
MDC1-205ENST00000425072 RBM27Q9P2N5 1060 aaKnown RBP12.02□□□□□ -0.49
MDC1-205ENST00000425072 SCAF8Q9UPN6 1271 aaKnown RBP12.02□□□□□ -0.49
MDC1-205ENST00000425072 UNCXA6NJT0 531 aa12.01□□□□□ -0.49
MDC1-205ENST00000425072 GDF11O95390 407 aa12.01□□□□□ -0.49
MDC1-205ENST00000425072 PARP1P09874 1014 aaKnown RBP12.01□□□□□ -0.49
MDC1-205ENST00000425072 IFNAR1P17181 557 aa12.01□□□□□ -0.49
MDC1-205ENST00000425072 GJB2P29033 226 aa12.01□□□□□ -0.49
MDC1-205ENST00000425072 IREB2P48200 963 aaKnown RBP12.01□□□□□ -0.49
MDC1-205ENST00000425072 MAP3K9P80192 1104 aa12.01□□□□□ -0.49
MDC1-205ENST00000425072 ICA1Q05084 483 aa12.01□□□□□ -0.49
MDC1-205ENST00000425072 LDHDQ86WU2 507 aa12.01□□□□□ -0.49
MDC1-205ENST00000425072 KLRG1Q96E93 195 aa12.01□□□□□ -0.49
MDC1-205ENST00000425072 AS3MTQ9HBK9 375 aa12.01□□□□□ -0.49
MDC1-205ENST00000425072 NCOA5Q9HCD5 579 aaKnown RBP12.01□□□□□ -0.49
MDC1-205ENST00000425072 PICK1Q9NRD5 415 aa12.01□□□□□ -0.49
MDC1-205ENST00000425072 ZBTB21Q9ULJ3 1066 aa12.01□□□□□ -0.49
MDC1-205ENST00000425072 PALM3A6NDB9 673 aaPredicted RBP12□□□□□ -0.49
MDC1-205ENST00000425072 SPDYE4A6NLX3 237 aa12□□□□□ -0.49
MDC1-205ENST00000425072 USP17L5A8MUK1 530 aa12□□□□□ -0.49
MDC1-205ENST00000425072 F5H6K3 240 aa12□□□□□ -0.49
MDC1-205ENST00000425072 USP2O75604 605 aaPredicted RBP12□□□□□ -0.49
MDC1-205ENST00000425072 SLURP2P0DP57 97 aa12□□□□□ -0.49
MDC1-205ENST00000425072 KLRC3Q07444 240 aa12□□□□□ -0.49
MDC1-205ENST00000425072 GRM4Q14833 912 aa12□□□□□ -0.49
MDC1-205ENST00000425072 ASPRV1Q53RT3 343 aa12□□□□□ -0.49
MDC1-205ENST00000425072 GPATCH4Q5T3I0 446 aaKnown RBP12□□□□□ -0.49
MDC1-205ENST00000425072 PRAMEF18Q5VWM3 479 aa12□□□□□ -0.49
MDC1-205ENST00000425072 ARMC9Q7Z3E5 817 aa12□□□□□ -0.49
MDC1-205ENST00000425072 CDAN1Q8IWY9 1227 aa12□□□□□ -0.49
MDC1-205ENST00000425072 CCDC144CPQ8IYA2 1237 aa12□□□□□ -0.49
MDC1-205ENST00000425072 SCYL3Q8IZE3 742 aa12□□□□□ -0.49
MDC1-205ENST00000425072 NSUN7Q8NE18 718 aaKnown RBP12□□□□□ -0.49
MDC1-205ENST00000425072 ZNF526Q8TF50 670 aaPredicted RBP12□□□□□ -0.49
MDC1-205ENST00000425072 DCAF4Q8WV16 495 aa12□□□□□ -0.49
MDC1-205ENST00000425072 MYL10Q9BUA6 226 aa12□□□□□ -0.49
MDC1-205ENST00000425072 GOPCQ9HD26 462 aa12□□□□□ -0.49
MDC1-205ENST00000425072 FAM217BQ9NTX9 383 aaPredicted RBP12□□□□□ -0.49
MDC1-205ENST00000425072 ORC3Q9UBD5 711 aaPredicted RBP12□□□□□ -0.49
MDC1-205ENST00000425072 TMX2Q9Y320 296 aa12□□□□□ -0.49
MDC1-205ENST00000425072 NID2Q14112 1375 aa12□□□□□ -0.49
MDC1-205ENST00000425072 KIF3CO14782 793 aa11.99□□□□□ -0.49
MDC1-205ENST00000425072 PRPF3O43395 683 aaKnown RBP11.99□□□□□ -0.49
MDC1-205ENST00000425072 XBP1P17861 261 aa11.99□□□□□ -0.49
MDC1-205ENST00000425072 CDC27P30260 824 aa11.99□□□□□ -0.49
MDC1-205ENST00000425072 GUCY1A2P33402 732 aa11.99□□□□□ -0.49
MDC1-205ENST00000425072 RRP1BQ14684 758 aaKnown RBP11.99□□□□□ -0.49
MDC1-205ENST00000425072 NTRK3Q16288 839 aa11.99□□□□□ -0.49
MDC1-205ENST00000425072 SLFN13Q68D06 897 aa11.99□□□□□ -0.49
MDC1-205ENST00000425072 SIAH1Q8IUQ4 282 aa11.99□□□□□ -0.49
MDC1-205ENST00000425072 GMCL1P1Q8NEA9 526 aa11.99□□□□□ -0.49
MDC1-205ENST00000425072 CDCA5Q96FF9 252 aa11.99□□□□□ -0.49
MDC1-205ENST00000425072 WRNIP1Q96S55 665 aa11.99□□□□□ -0.49
MDC1-205ENST00000425072 WDR18Q9BV38 432 aa11.99□□□□□ -0.49
MDC1-205ENST00000425072 RNF26Q9BY78 433 aaPredicted RBP11.99□□□□□ -0.49
MDC1-205ENST00000425072 CSADQ9Y600 493 aa11.99□□□□□ -0.49
MDC1-205ENST00000425072 SIPA1L1O43166 1804 aa11.99□□□□□ -0.49
MDC1-205ENST00000425072 WDR33Q9C0J8 1336 aaKnown RBP11.98□□□□□ -0.49
MDC1-205ENST00000425072 STK36Q9NRP7 1315 aa11.98□□□□□ -0.49
MDC1-205ENST00000425072 PTPDC1A2A3K4 754 aa11.98□□□□□ -0.49
MDC1-205ENST00000425072 C19orf81C9J6K1 198 aa11.98□□□□□ -0.49
MDC1-205ENST00000425072 ADM5C9JUS6 153 aa11.98□□□□□ -0.49
MDC1-205ENST00000425072 KLRF2D3W0D1 207 aa11.98□□□□□ -0.49
MDC1-205ENST00000425072 H3BQV1 296 aa11.98□□□□□ -0.49
MDC1-205ENST00000425072 DEXIO95424 95 aa11.98□□□□□ -0.49
MDC1-205ENST00000425072 FMNL1O95466 1100 aaPredicted RBP11.98□□□□□ -0.49
MDC1-205ENST00000425072 CTDNEP1O95476 244 aa11.98□□□□□ -0.49
MDC1-205ENST00000425072 SNHG28P0DPA3 235 aa11.98□□□□□ -0.49
MDC1-205ENST00000425072 RXRAP19793 462 aa11.98□□□□□ -0.49
MDC1-205ENST00000425072 DDIT3P35638 169 aa11.98□□□□□ -0.49
MDC1-205ENST00000425072 USP14P54578 494 aa11.98□□□□□ -0.49
MDC1-205ENST00000425072 TRIM29Q14134 588 aa11.98□□□□□ -0.49
MDC1-205ENST00000425072 TTLL12Q14166 644 aaPredicted RBP11.98□□□□□ -0.49
MDC1-205ENST00000425072 NOL9Q5SY16 702 aaKnown RBP11.98□□□□□ -0.49
MDC1-205ENST00000425072 TMTC3Q6ZXV5 915 aa11.98□□□□□ -0.49
MDC1-205ENST00000425072 RAB11FIP4Q86YS3 637 aa11.98□□□□□ -0.49
MDC1-205ENST00000425072 ANKRD13AQ8IZ07 590 aa11.98□□□□□ -0.49
MDC1-205ENST00000425072 DDX11Q96FC9 970 aa11.98□□□□□ -0.49
MDC1-205ENST00000425072 MAD2L2Q9UI95 211 aa11.98□□□□□ -0.49
MDC1-205ENST00000425072 V9GY48 417 aaPredicted RBP11.98□□□□□ -0.49
MDC1-205ENST00000425072 MYH4Q9Y623 1939 aa11.98□□□□□ -0.49
MDC1-205ENST00000425072 USP17L10C9JJH3 530 aa11.97□□□□□ -0.49
MDC1-205ENST00000425072 STX6O43752 255 aa11.97□□□□□ -0.49
MDC1-205ENST00000425072 PDHBP11177 359 aa11.97□□□□□ -0.49
MDC1-205ENST00000425072 SYT1P21579 422 aa11.97□□□□□ -0.49
MDC1-205ENST00000425072 INPP5BP32019 993 aa11.97□□□□□ -0.49
MDC1-205ENST00000425072 SLC1A4P43007 532 aa11.97□□□□□ -0.49
MDC1-205ENST00000425072 FKBP1BP68106 108 aa11.97□□□□□ -0.49
MDC1-205ENST00000425072 JAG1P78504 1218 aa11.97□□□□□ -0.49
MDC1-205ENST00000425072 ZNF543Q08ER8 600 aa11.97□□□□□ -0.49
MDC1-205ENST00000425072 ST3GAL1Q11201 340 aa11.97□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 70 ms