RNA–Protein interactions for RNA: ENST00000424964.6

TMEM248-204, Transcript of transmembrane protein 248, humanhuman

TSL 4

Gene TMEM248, Length 536 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM248-204ENST00000424964 USP17L22D6RA61 530 aa17.49■□□□□ 0.39
TMEM248-204ENST00000424964 USP17L17D6RBQ6 530 aa17.49■□□□□ 0.39
TMEM248-204ENST00000424964 USP17L19D6RCP7 530 aa17.49■□□□□ 0.39
TMEM248-204ENST00000424964 USP17L20D6RJB6 530 aa17.49■□□□□ 0.39
TMEM248-204ENST00000424964 TLR2O60603 784 aa17.49■□□□□ 0.39
TMEM248-204ENST00000424964 KDM4AO75164 1064 aa17.49■□□□□ 0.39
TMEM248-204ENST00000424964 VCAM1P19320 739 aa17.49■□□□□ 0.39
TMEM248-204ENST00000424964 HOXA7P31268 230 aaPredicted RBP17.49■□□□□ 0.39
TMEM248-204ENST00000424964 USP17L24Q0WX57 530 aa17.49■□□□□ 0.39
TMEM248-204ENST00000424964 SPICE1Q8N0Z3 855 aa17.49■□□□□ 0.39
TMEM248-204ENST00000424964 SMCR8Q8TEV9 937 aaPredicted RBP17.49■□□□□ 0.39
TMEM248-204ENST00000424964 ASCC2Q9H1I8 757 aaPredicted RBP17.49■□□□□ 0.39
TMEM248-204ENST00000424964 IL17RBQ9NRM6 502 aa17.49■□□□□ 0.39
TMEM248-204ENST00000424964 STX8Q9UNK0 236 aa17.49■□□□□ 0.39
TMEM248-204ENST00000424964 SLC27A2O14975 620 aa17.48■□□□□ 0.39
TMEM248-204ENST00000424964 REC8O95072 547 aa17.48■□□□□ 0.39
TMEM248-204ENST00000424964 NT5C2P49902 561 aa17.48■□□□□ 0.39
TMEM248-204ENST00000424964 NECTIN1Q15223 517 aa17.48■□□□□ 0.39
TMEM248-204ENST00000424964 KIAA1755Q5JYT7 1200 aa17.48■□□□□ 0.39
TMEM248-204ENST00000424964 CREB3L3Q68CJ9 461 aa17.48■□□□□ 0.39
TMEM248-204ENST00000424964 LRRC47Q8N1G4 583 aaKnown RBP17.48■□□□□ 0.39
TMEM248-204ENST00000424964 NKX2-3Q8TAU0 364 aa17.48■□□□□ 0.39
TMEM248-204ENST00000424964 LPAR1Q92633 364 aa17.48■□□□□ 0.39
TMEM248-204ENST00000424964 MKL1Q969V6 931 aa17.48■□□□□ 0.39
TMEM248-204ENST00000424964 RPAP3Q9H6T3 665 aaPredicted RBP17.48■□□□□ 0.39
TMEM248-204ENST00000424964 TCP11L1Q9NUJ3 509 aa17.48■□□□□ 0.39
TMEM248-204ENST00000424964 ZSWIM5Q9P217 1185 aa17.48■□□□□ 0.39
TMEM248-204ENST00000424964 CPA4Q9UI42 421 aa17.48■□□□□ 0.39
TMEM248-204ENST00000424964 E7EWF7 191 aa17.47■□□□□ 0.39
TMEM248-204ENST00000424964 FKTNO75072 461 aa17.47■□□□□ 0.39
TMEM248-204ENST00000424964 RNF20Q5VTR2 975 aa17.47■□□□□ 0.39
TMEM248-204ENST00000424964 RALYLQ86SE5 291 aaKnown RBP17.47■□□□□ 0.39
TMEM248-204ENST00000424964 IQCA1Q86XH1 822 aa17.47■□□□□ 0.39
TMEM248-204ENST00000424964 ZNF296Q8WUU4 475 aaPredicted RBP17.47■□□□□ 0.39
TMEM248-204ENST00000424964 ZKSCAN3Q9BRR0 538 aa17.47■□□□□ 0.39
TMEM248-204ENST00000424964 TANGO6Q9C0B7 1094 aa17.47■□□□□ 0.39
TMEM248-204ENST00000424964 PRDM10Q9NQV6 1147 aa17.47■□□□□ 0.39
TMEM248-204ENST00000424964 TAF6LQ9Y6J9 622 aa17.47■□□□□ 0.39
TMEM248-204ENST00000424964 F5H6K3 240 aa17.46■□□□□ 0.39
TMEM248-204ENST00000424964 SP3Q02447 781 aa17.46■□□□□ 0.39
TMEM248-204ENST00000424964 KLRC3Q07444 240 aa17.46■□□□□ 0.39
TMEM248-204ENST00000424964 CCDC178Q5BJE1 867 aa17.46■□□□□ 0.39
TMEM248-204ENST00000424964 NOM1Q5C9Z4 860 aaKnown RBP17.46■□□□□ 0.39
TMEM248-204ENST00000424964 CATSPERGQ6ZRH7 1159 aa17.46■□□□□ 0.39
TMEM248-204ENST00000424964 NCOA7Q8NI08 942 aa17.46■□□□□ 0.39
TMEM248-204ENST00000424964 P2RX7Q99572 595 aaKnown RBP17.46■□□□□ 0.39
TMEM248-204ENST00000424964 WDR46O15213 610 aaKnown RBP17.45■□□□□ 0.38
TMEM248-204ENST00000424964 NDUFB10O96000 172 aa17.45■□□□□ 0.38
TMEM248-204ENST00000424964 TOP1P11387 765 aaKnown RBP17.45■□□□□ 0.38
TMEM248-204ENST00000424964 SAMD1Q6SPF0 538 aaPredicted RBP17.45■□□□□ 0.38
TMEM248-204ENST00000424964 C17orf99Q6UX52 265 aa17.45■□□□□ 0.38
TMEM248-204ENST00000424964 STOX1Q6ZVD7 989 aa17.45■□□□□ 0.38
TMEM248-204ENST00000424964 CHMP4CQ96CF2 233 aa17.45■□□□□ 0.38
TMEM248-204ENST00000424964 TTC14Q96N46 770 aa17.45■□□□□ 0.38
TMEM248-204ENST00000424964 UBAC1Q9BSL1 405 aa17.45■□□□□ 0.38
TMEM248-204ENST00000424964 ISY1Q9ULR0 285 aaKnown RBP17.45■□□□□ 0.38
TMEM248-204ENST00000424964 SYNPO2Q9UMS6 1093 aa17.45■□□□□ 0.38
TMEM248-204ENST00000424964 MTMR7Q9Y216 660 aa17.45■□□□□ 0.38
TMEM248-204ENST00000424964 GCLCP48506 637 aaPredicted RBP17.44■□□□□ 0.38
TMEM248-204ENST00000424964 HERVK_113P62684 666 aa17.44■□□□□ 0.38
TMEM248-204ENST00000424964 FAM83BQ5T0W9 1011 aa17.44■□□□□ 0.38
TMEM248-204ENST00000424964 SLFN13Q68D06 897 aa17.44■□□□□ 0.38
TMEM248-204ENST00000424964 CYB5R4Q7L1T6 521 aa17.44■□□□□ 0.38
TMEM248-204ENST00000424964 ANKRD13CQ8N6S4 541 aa17.44■□□□□ 0.38
TMEM248-204ENST00000424964 ZSCAN10Q96SZ4 725 aaPredicted RBP17.44■□□□□ 0.38
TMEM248-204ENST00000424964 NUP88Q99567 741 aaPredicted RBP17.44■□□□□ 0.38
TMEM248-204ENST00000424964 TMEM47Q9BQJ4 181 aa17.44■□□□□ 0.38
TMEM248-204ENST00000424964 ADGRA2Q96PE1 1338 aa17.44■□□□□ 0.38
TMEM248-204ENST00000424964 FLOT1O75955 427 aa17.43■□□□□ 0.38
TMEM248-204ENST00000424964 ECM2O94769 699 aaPredicted RBP17.43■□□□□ 0.38
TMEM248-204ENST00000424964 ZKSCAN1P17029 563 aaPredicted RBP17.43■□□□□ 0.38
TMEM248-204ENST00000424964 NOVP48745 357 aa17.43■□□□□ 0.38
TMEM248-204ENST00000424964 COG2Q14746 738 aa17.43■□□□□ 0.38
TMEM248-204ENST00000424964 GMCL1P1Q8NEA9 526 aa17.43■□□□□ 0.38
TMEM248-204ENST00000424964 ERO1AQ96HE7 468 aa17.43■□□□□ 0.38
TMEM248-204ENST00000424964 HOXC10Q9NYD6 342 aa17.43■□□□□ 0.38
TMEM248-204ENST00000424964 BCRP11274 1271 aa17.42■□□□□ 0.38
TMEM248-204ENST00000424964 MCCP23508 829 aa17.42■□□□□ 0.38
TMEM248-204ENST00000424964 KIF22Q14807 665 aa17.42■□□□□ 0.38
TMEM248-204ENST00000424964 RCSD1Q6JBY9 416 aa17.42■□□□□ 0.38
TMEM248-204ENST00000424964 CHST3Q7LGC8 479 aa17.42■□□□□ 0.38
TMEM248-204ENST00000424964 DGKHQ86XP1 1220 aa17.42■□□□□ 0.38
TMEM248-204ENST00000424964 CD99L2Q8TCZ2 262 aa17.42■□□□□ 0.38
TMEM248-204ENST00000424964 PAGR1Q9BTK6 254 aa17.42■□□□□ 0.38
TMEM248-204ENST00000424964 TNKSO95271 1327 aa17.42■□□□□ 0.38
TMEM248-204ENST00000424964 ERICH2A1L162 156 aa17.41■□□□□ 0.38
TMEM248-204ENST00000424964 IFIT3O14879 490 aaKnown RBP17.41■□□□□ 0.38
TMEM248-204ENST00000424964 BMP3P12645 472 aa17.41■□□□□ 0.38
TMEM248-204ENST00000424964 SLC1A4P43007 532 aa17.41■□□□□ 0.38
TMEM248-204ENST00000424964 SART3Q15020 963 aaKnown RBP17.41■□□□□ 0.38
TMEM248-204ENST00000424964 ENAHQ8N8S7 591 aaPredicted RBP17.41■□□□□ 0.38
TMEM248-204ENST00000424964 GTF3C2Q8WUA4 911 aaPredicted RBP17.41■□□□□ 0.38
TMEM248-204ENST00000424964 KAT14Q9H8E8 782 aa17.41■□□□□ 0.38
TMEM248-204ENST00000424964 FBXO28Q9NVF7 368 aa17.41■□□□□ 0.38
TMEM248-204ENST00000424964 SPDYE16A6NNV3 312 aaPredicted RBP17.4■□□□□ 0.38
TMEM248-204ENST00000424964 EPB41L2O43491 1005 aaKnown RBP17.4■□□□□ 0.38
TMEM248-204ENST00000424964 EIF5BO60841 1220 aaKnown RBP17.4■□□□□ 0.38
TMEM248-204ENST00000424964 DSG3P32926 999 aa17.4■□□□□ 0.38
TMEM248-204ENST00000424964 HSPA4P34932 840 aa17.4■□□□□ 0.38
TMEM248-204ENST00000424964 LACTBP83111 547 aaPredicted RBP17.4■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms