RNA–Protein interactions for RNA: ENST00000424443.7

TSPAN3-203, Transcript of tetraspanin 3, humanhuman

TSL 2 BASIC

Gene TSPAN3, Length 1,530 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-203ENST00000424443 NCOA7Q8NI08 942 aa29.95■■■□□ 2.38
TSPAN3-203ENST00000424443 IL17RBQ9NRM6 502 aa29.95■■■□□ 2.38
TSPAN3-203ENST00000424443 TCP11L1Q9NUJ3 509 aa29.95■■■□□ 2.38
TSPAN3-203ENST00000424443 NMT2O60551 498 aa29.94■■■□□ 2.38
TSPAN3-203ENST00000424443 EIF5BO60841 1220 aaKnown RBP29.94■■■□□ 2.38
TSPAN3-203ENST00000424443 VCAM1P19320 739 aa29.94■■■□□ 2.38
TSPAN3-203ENST00000424443 CCDC178Q5BJE1 867 aa29.94■■■□□ 2.38
TSPAN3-203ENST00000424443 SMCR8Q8TEV9 937 aaPredicted RBP29.94■■■□□ 2.38
TSPAN3-203ENST00000424443 MKL1Q969V6 931 aa29.93■■■□□ 2.38
TSPAN3-203ENST00000424443 ZSWIM5Q9P217 1185 aa29.93■■■□□ 2.38
TSPAN3-203ENST00000424443 SYNPO2Q9UMS6 1093 aa29.93■■■□□ 2.38
TSPAN3-203ENST00000424443 MYH4Q9Y623 1939 aa29.93■■■□□ 2.38
TSPAN3-203ENST00000424443 USP17L15C9J2P7 530 aa29.92■■■□□ 2.38
TSPAN3-203ENST00000424443 USP17L13C9JLJ4 530 aa29.92■■■□□ 2.38
TSPAN3-203ENST00000424443 USP17L11C9JVI0 530 aa29.92■■■□□ 2.38
TSPAN3-203ENST00000424443 USP17L18D6R9N7 530 aa29.92■■■□□ 2.38
TSPAN3-203ENST00000424443 USP17L22D6RA61 530 aa29.92■■■□□ 2.38
TSPAN3-203ENST00000424443 USP17L17D6RBQ6 530 aa29.92■■■□□ 2.38
TSPAN3-203ENST00000424443 USP17L19D6RCP7 530 aa29.92■■■□□ 2.38
TSPAN3-203ENST00000424443 USP17L20D6RJB6 530 aa29.92■■■□□ 2.38
TSPAN3-203ENST00000424443 CYP2C8P10632 490 aa29.92■■■□□ 2.38
TSPAN3-203ENST00000424443 HSPA8P11142 646 aaKnown RBP29.92■■■□□ 2.38
TSPAN3-203ENST00000424443 ZKSCAN1P17029 563 aaPredicted RBP29.92■■■□□ 2.38
TSPAN3-203ENST00000424443 HOXA7P31268 230 aaPredicted RBP29.92■■■□□ 2.38
TSPAN3-203ENST00000424443 USP17L24Q0WX57 530 aa29.92■■■□□ 2.38
TSPAN3-203ENST00000424443 SPICE1Q8N0Z3 855 aa29.92■■■□□ 2.38
TSPAN3-203ENST00000424443 LRRC47Q8N1G4 583 aaKnown RBP29.91■■■□□ 2.38
TSPAN3-203ENST00000424443 ZKSCAN3Q9BRR0 538 aa29.91■■■□□ 2.38
TSPAN3-203ENST00000424443 UBAC1Q9BSL1 405 aa29.91■■■□□ 2.38
TSPAN3-203ENST00000424443 RPAP3Q9H6T3 665 aaPredicted RBP29.91■■■□□ 2.38
TSPAN3-203ENST00000424443 TLR2O60603 784 aa29.91■■■□□ 2.38
TSPAN3-203ENST00000424443 LBX1P52954 281 aa29.91■■■□□ 2.38
TSPAN3-203ENST00000424443 ASCC2Q9H1I8 757 aaPredicted RBP29.91■■■□□ 2.38
TSPAN3-203ENST00000424443 TAF6LQ9Y6J9 622 aa29.91■■■□□ 2.38
TSPAN3-203ENST00000424443 F5H6K3 240 aa29.9■■■□□ 2.38
TSPAN3-203ENST00000424443 EPB41L2O43491 1005 aaKnown RBP29.9■■■□□ 2.38
TSPAN3-203ENST00000424443 KLRC3Q07444 240 aa29.9■■■□□ 2.38
TSPAN3-203ENST00000424443 TTC14Q96N46 770 aa29.9■■■□□ 2.38
TSPAN3-203ENST00000424443 TANGO6Q9C0B7 1094 aa29.9■■■□□ 2.38
TSPAN3-203ENST00000424443 R3HDMLQ9H3Y0 253 aa29.9■■■□□ 2.38
TSPAN3-203ENST00000424443 GPR25O00155 361 aa29.89■■■□□ 2.38
TSPAN3-203ENST00000424443 WDR46O15213 610 aaKnown RBP29.89■■■□□ 2.38
TSPAN3-203ENST00000424443 STOX1Q6ZVD7 989 aa29.89■■■□□ 2.38
TSPAN3-203ENST00000424443 NKX2-3Q8TAU0 364 aa29.89■■■□□ 2.38
TSPAN3-203ENST00000424443 ZSCAN10Q96SZ4 725 aaPredicted RBP29.89■■■□□ 2.38
TSPAN3-203ENST00000424443 KIAA1755Q5JYT7 1200 aa29.88■■■□□ 2.37
TSPAN3-203ENST00000424443 CATSPERGQ6ZRH7 1159 aa29.88■■■□□ 2.37
TSPAN3-203ENST00000424443 TOP1P11387 765 aaKnown RBP29.87■■■□□ 2.37
TSPAN3-203ENST00000424443 MCCP23508 829 aa29.87■■■□□ 2.37
TSPAN3-203ENST00000424443 GMCL1P1Q8NEA9 526 aa29.87■■■□□ 2.37
TSPAN3-203ENST00000424443 ERICH2A1L162 156 aa29.86■■■□□ 2.37
TSPAN3-203ENST00000424443 NDUFB10O96000 172 aa29.86■■■□□ 2.37
TSPAN3-203ENST00000424443 KRT32Q14532 448 aa29.86■■■□□ 2.37
TSPAN3-203ENST00000424443 SART3Q15020 963 aaKnown RBP29.86■■■□□ 2.37
TSPAN3-203ENST00000424443 NOM1Q5C9Z4 860 aaKnown RBP29.86■■■□□ 2.37
TSPAN3-203ENST00000424443 DGKHQ86XP1 1220 aa29.86■■■□□ 2.37
TSPAN3-203ENST00000424443 CPA4Q9UI42 421 aa29.86■■■□□ 2.37
TSPAN3-203ENST00000424443 ISY1Q9ULR0 285 aaKnown RBP29.86■■■□□ 2.37
TSPAN3-203ENST00000424443 HSPA4P34932 840 aa29.86■■■□□ 2.37
TSPAN3-203ENST00000424443 NOVP48745 357 aa29.86■■■□□ 2.37
TSPAN3-203ENST00000424443 SLFN13Q68D06 897 aa29.86■■■□□ 2.37
TSPAN3-203ENST00000424443 CYB5R4Q7L1T6 521 aa29.86■■■□□ 2.37
TSPAN3-203ENST00000424443 TMEM47Q9BQJ4 181 aa29.86■■■□□ 2.37
TSPAN3-203ENST00000424443 MTMR7Q9Y216 660 aa29.86■■■□□ 2.37
TSPAN3-203ENST00000424443 TNKSO95271 1327 aa29.86■■■□□ 2.37
TSPAN3-203ENST00000424443 FKTNO75072 461 aa29.85■■■□□ 2.37
TSPAN3-203ENST00000424443 GCLCP48506 637 aaPredicted RBP29.85■■■□□ 2.37
TSPAN3-203ENST00000424443 FAM83BQ5T0W9 1011 aa29.85■■■□□ 2.37
TSPAN3-203ENST00000424443 P2RX7Q99572 595 aaKnown RBP29.85■■■□□ 2.37
TSPAN3-203ENST00000424443 HERVK_113P62684 666 aa29.84■■■□□ 2.37
TSPAN3-203ENST00000424443 GTF3C2Q8WUA4 911 aaPredicted RBP29.84■■■□□ 2.37
TSPAN3-203ENST00000424443 ZNF296Q8WUU4 475 aaPredicted RBP29.84■■■□□ 2.37
TSPAN3-203ENST00000424443 USP26Q9BXU7 913 aa29.84■■■□□ 2.37
TSPAN3-203ENST00000424443 KAT14Q9H8E8 782 aa29.84■■■□□ 2.37
TSPAN3-203ENST00000424443 IFIT3O14879 490 aaKnown RBP29.83■■■□□ 2.37
TSPAN3-203ENST00000424443 FLOT1O75955 427 aa29.83■■■□□ 2.37
TSPAN3-203ENST00000424443 MCM5P33992 734 aa29.83■■■□□ 2.37
TSPAN3-203ENST00000424443 SP3Q02447 781 aa29.83■■■□□ 2.37
TSPAN3-203ENST00000424443 COG2Q14746 738 aa29.83■■■□□ 2.37
TSPAN3-203ENST00000424443 TSGA10IPQ3SY00 556 aa29.83■■■□□ 2.37
TSPAN3-203ENST00000424443 IFIT1BQ5T764 474 aaKnown RBP29.83■■■□□ 2.37
TSPAN3-203ENST00000424443 RCSD1Q6JBY9 416 aa29.83■■■□□ 2.37
TSPAN3-203ENST00000424443 SAMD1Q6SPF0 538 aaPredicted RBP29.83■■■□□ 2.37
TSPAN3-203ENST00000424443 C17orf99Q6UX52 265 aa29.83■■■□□ 2.37
TSPAN3-203ENST00000424443 MB21D2Q8IYB1 491 aaPredicted RBP29.83■■■□□ 2.37
TSPAN3-203ENST00000424443 HOXC10Q9NYD6 342 aa29.83■■■□□ 2.37
TSPAN3-203ENST00000424443 SLC1A4P43007 532 aa29.82■■■□□ 2.36
TSPAN3-203ENST00000424443 CHST3Q7LGC8 479 aa29.82■■■□□ 2.36
TSPAN3-203ENST00000424443 RASEFQ8IZ41 740 aa29.82■■■□□ 2.36
TSPAN3-203ENST00000424443 ENAHQ8N8S7 591 aaPredicted RBP29.82■■■□□ 2.36
TSPAN3-203ENST00000424443 NEK1Q96PY6 1258 aa29.82■■■□□ 2.36
TSPAN3-203ENST00000424443 NUP88Q99567 741 aaPredicted RBP29.82■■■□□ 2.36
TSPAN3-203ENST00000424443 ADGRA2Q96PE1 1338 aa29.82■■■□□ 2.36
TSPAN3-203ENST00000424443 BMP3P12645 472 aa29.81■■■□□ 2.36
TSPAN3-203ENST00000424443 CHMP4CQ96CF2 233 aa29.81■■■□□ 2.36
TSPAN3-203ENST00000424443 PRDM10Q9NQV6 1147 aa29.81■■■□□ 2.36
TSPAN3-203ENST00000424443 KIF22Q14807 665 aa29.81■■■□□ 2.36
TSPAN3-203ENST00000424443 ANKRD13CQ8N6S4 541 aa29.81■■■□□ 2.36
TSPAN3-203ENST00000424443 GMCL1Q96IK5 515 aa29.81■■■□□ 2.36
TSPAN3-203ENST00000424443 WTAPQ15007 396 aa29.8■■■□□ 2.36
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms