RNA–Protein interactions for RNA: ENST00000424270.6

SDCBP-203, Transcript of syndecan binding protein, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene SDCBP, Length 1,277 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-203ENST00000424270 GLT1D1Q96MS3 346 aa7.89□□□□□ -1.15
SDCBP-203ENST00000424270 WDR18Q9BV38 432 aa7.89□□□□□ -1.15
SDCBP-203ENST00000424270 DDX4Q9NQI0 724 aaKnown RBP7.89□□□□□ -1.15
SDCBP-203ENST00000424270 FAM86C1Q9NVL1 165 aa7.89□□□□□ -1.15
SDCBP-203ENST00000424270 ABCF2Q9UG63 623 aa7.89□□□□□ -1.15
SDCBP-203ENST00000424270 GRM8O00222 908 aa7.88□□□□□ -1.15
SDCBP-203ENST00000424270 GDF11O95390 407 aa7.88□□□□□ -1.15
SDCBP-203ENST00000424270 CD44P16070 742 aaKnown RBP7.88□□□□□ -1.15
SDCBP-203ENST00000424270 ACLYP53396 1101 aa7.88□□□□□ -1.15
SDCBP-203ENST00000424270 LRRC24Q50LG9 513 aa7.88□□□□□ -1.15
SDCBP-203ENST00000424270 PTCRAQ6ISU1 281 aaPredicted RBP7.88□□□□□ -1.15
SDCBP-203ENST00000424270 SUGP1Q8IWZ8 645 aaKnown RBP7.88□□□□□ -1.15
SDCBP-203ENST00000424270 FAM178BQ8IXR5 827 aa7.88□□□□□ -1.15
SDCBP-203ENST00000424270 ANKS1AQ92625 1134 aa7.88□□□□□ -1.15
SDCBP-203ENST00000424270 ATOH1Q92858 354 aaPredicted RBP7.88□□□□□ -1.15
SDCBP-203ENST00000424270 TBX21Q9UL17 535 aa7.88□□□□□ -1.15
SDCBP-203ENST00000424270 CLSPNQ9HAW4 1339 aa7.87□□□□□ -1.15
SDCBP-203ENST00000424270 KIF28PB7ZC32 967 aa7.87□□□□□ -1.15
SDCBP-203ENST00000424270 STRNO43815 780 aa7.87□□□□□ -1.15
SDCBP-203ENST00000424270 IL9P15248 144 aa7.87□□□□□ -1.15
SDCBP-203ENST00000424270 CCL23P55773 120 aa7.87□□□□□ -1.15
SDCBP-203ENST00000424270 NCAPG2Q86XI2 1143 aa7.87□□□□□ -1.15
SDCBP-203ENST00000424270 RPUSD2Q8IZ73 545 aaKnown RBP7.87□□□□□ -1.15
SDCBP-203ENST00000424270 TSPYL6Q8N831 410 aa7.87□□□□□ -1.15
SDCBP-203ENST00000424270 LENG1Q96BZ8 264 aaPredicted RBP7.87□□□□□ -1.15
SDCBP-203ENST00000424270 PRRX2Q99811 253 aa7.87□□□□□ -1.15
SDCBP-203ENST00000424270 NOL10Q9BSC4 688 aaKnown RBP7.87□□□□□ -1.15
SDCBP-203ENST00000424270 UPF3BQ9BZI7 483 aaKnown RBP7.87□□□□□ -1.15
SDCBP-203ENST00000424270 HIPK3Q9H422 1215 aa7.87□□□□□ -1.15
SDCBP-203ENST00000424270 UBE2ZQ9H832 354 aaPredicted RBP7.87□□□□□ -1.15
SDCBP-203ENST00000424270 HERC5Q9UII4 1024 aaKnown RBP7.87□□□□□ -1.15
SDCBP-203ENST00000424270 CNPY2Q9Y2B0 182 aa7.87□□□□□ -1.15
SDCBP-203ENST00000424270 MOXD2PA6NHM9 499 aa7.86□□□□□ -1.15
SDCBP-203ENST00000424270 CNMDO75829 334 aa7.86□□□□□ -1.15
SDCBP-203ENST00000424270 KRT37O76014 449 aa7.86□□□□□ -1.15
SDCBP-203ENST00000424270 AKR1A1P14550 325 aa7.86□□□□□ -1.15
SDCBP-203ENST00000424270 ID4P47928 161 aa7.86□□□□□ -1.15
SDCBP-203ENST00000424270 CLCN6P51797 869 aa7.86□□□□□ -1.15
SDCBP-203ENST00000424270 GRB10Q13322 594 aa7.86□□□□□ -1.15
SDCBP-203ENST00000424270 KCNA10Q16322 511 aa7.86□□□□□ -1.15
SDCBP-203ENST00000424270 TWISTNBQ3B726 338 aaPredicted RBP7.86□□□□□ -1.15
SDCBP-203ENST00000424270 SPTY2D1Q68D10 685 aaPredicted RBP7.86□□□□□ -1.15
SDCBP-203ENST00000424270 SLC4A10Q6U841 1118 aa7.86□□□□□ -1.15
SDCBP-203ENST00000424270 PRSS33Q8NF86 280 aa7.86□□□□□ -1.15
SDCBP-203ENST00000424270 LPIN2Q92539 896 aa7.86□□□□□ -1.15
SDCBP-203ENST00000424270 TSEN34Q9BSV6 310 aaKnown RBP7.86□□□□□ -1.15
SDCBP-203ENST00000424270 SPC25Q9HBM1 224 aa7.86□□□□□ -1.15
SDCBP-203ENST00000424270 BTBD7Q9P203 1132 aa7.86□□□□□ -1.15
SDCBP-203ENST00000424270 DENND2AQ9ULE3 1009 aa7.86□□□□□ -1.15
SDCBP-203ENST00000424270 FAM50BQ9Y247 325 aa7.86□□□□□ -1.15
SDCBP-203ENST00000424270 XIRP2A4UGR9 3374 aa7.85□□□□□ -1.15
SDCBP-203ENST00000424270 KIF16BQ96L93 1317 aa7.85□□□□□ -1.15
SDCBP-203ENST00000424270 A0A0U1RQG5 324 aaPredicted RBP7.85□□□□□ -1.15
SDCBP-203ENST00000424270 EPOPA6NHQ4 379 aa7.85□□□□□ -1.15
SDCBP-203ENST00000424270 F6X3S4 739 aa7.85□□□□□ -1.15
SDCBP-203ENST00000424270 C6orf222P0C671 652 aaPredicted RBP7.85□□□□□ -1.15
SDCBP-203ENST00000424270 ZNF853P0CG23 659 aa7.85□□□□□ -1.15
SDCBP-203ENST00000424270 ACTN1P12814 892 aa7.85□□□□□ -1.15
SDCBP-203ENST00000424270 ERCC3P19447 782 aa7.85□□□□□ -1.15
SDCBP-203ENST00000424270 POU3F3P20264 500 aaPredicted RBP7.85□□□□□ -1.15
SDCBP-203ENST00000424270 RRP1BQ14684 758 aaKnown RBP7.85□□□□□ -1.15
SDCBP-203ENST00000424270 PUS10Q3MIT2 529 aaKnown RBP7.85□□□□□ -1.15
SDCBP-203ENST00000424270 LEXMQ3ZCV2 418 aa7.85□□□□□ -1.15
SDCBP-203ENST00000424270 TEX11Q8IYF3 940 aa7.85□□□□□ -1.15
SDCBP-203ENST00000424270 TSR2Q969E8 191 aaKnown RBP7.85□□□□□ -1.15
SDCBP-203ENST00000424270 MAML3Q96JK9 1138 aa7.85□□□□□ -1.15
SDCBP-203ENST00000424270 TANGO6Q9C0B7 1094 aa7.85□□□□□ -1.15
SDCBP-203ENST00000424270 EMILIN3Q9NT22 766 aa7.85□□□□□ -1.15
SDCBP-203ENST00000424270 PI4KBQ9UBF8 816 aa7.85□□□□□ -1.15
SDCBP-203ENST00000424270 MTUS1Q9ULD2 1270 aa7.85□□□□□ -1.15
SDCBP-203ENST00000424270 ZBTB21Q9ULJ3 1066 aa7.85□□□□□ -1.15
SDCBP-203ENST00000424270 A0A0G2JMZ2 1700 aa7.85□□□□□ -1.15
SDCBP-203ENST00000424270 MROH7-TTC4A0A0A0MT08 1334 aa7.84□□□□□ -1.15
SDCBP-203ENST00000424270 GAKO14976 1311 aa7.84□□□□□ -1.15
SDCBP-203ENST00000424270 SOWAHBA6NEL2 793 aa7.84□□□□□ -1.15
SDCBP-203ENST00000424270 COBLO75128 1261 aa7.84□□□□□ -1.15
SDCBP-203ENST00000424270 FCER1AP12319 257 aa7.84□□□□□ -1.15
SDCBP-203ENST00000424270 USP14P54578 494 aa7.84□□□□□ -1.15
SDCBP-203ENST00000424270 GSTO1P78417 241 aa7.84□□□□□ -1.15
SDCBP-203ENST00000424270 RAB3GAP1Q15042 981 aa7.84□□□□□ -1.15
SDCBP-203ENST00000424270 DEFB128Q7Z7B8 93 aa7.84□□□□□ -1.15
SDCBP-203ENST00000424270 PCSK9Q8NBP7 692 aaKnown RBP7.84□□□□□ -1.15
SDCBP-203ENST00000424270 KLHDC4Q8TBB5 520 aa7.84□□□□□ -1.15
SDCBP-203ENST00000424270 GDPD5Q8WTR4 605 aa7.84□□□□□ -1.15
SDCBP-203ENST00000424270 PBXIP1Q96AQ6 731 aa7.84□□□□□ -1.15
SDCBP-203ENST00000424270 CDCA7LQ96GN5 454 aa7.84□□□□□ -1.15
SDCBP-203ENST00000424270 SUCLG2Q96I99 432 aa7.84□□□□□ -1.15
SDCBP-203ENST00000424270 CRBNQ96SW2 442 aa7.84□□□□□ -1.15
SDCBP-203ENST00000424270 ZBED2Q9BTP6 218 aa7.84□□□□□ -1.15
SDCBP-203ENST00000424270 MOV10L1Q9BXT6 1211 aaKnown RBP7.84□□□□□ -1.15
SDCBP-203ENST00000424270 IRF2BPLQ9H1B7 796 aa7.84□□□□□ -1.15
SDCBP-203ENST00000424270 RPAP3Q9H6T3 665 aaPredicted RBP7.84□□□□□ -1.15
SDCBP-203ENST00000424270 NRBP1Q9UHY1 535 aa7.84□□□□□ -1.15
SDCBP-203ENST00000424270 ZHX1Q9UKY1 873 aaPredicted RBP7.84□□□□□ -1.15
SDCBP-203ENST00000424270 MYO9BQ13459 2157 aa7.84□□□□□ -1.15
SDCBP-203ENST00000424270 RFX7Q2KHR2 1363 aa7.84□□□□□ -1.16
SDCBP-203ENST00000424270 ELP1O95163 1332 aa7.83□□□□□ -1.16
SDCBP-203ENST00000424270 SALL1Q9NSC2 1324 aa7.83□□□□□ -1.16
SDCBP-203ENST00000424270 SYNRGQ9UMZ2 1314 aa7.83□□□□□ -1.16
SDCBP-203ENST00000424270 ATAD5Q96QE3 1844 aa7.83□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 71.3 ms