RNA–Protein interactions for RNA: ENST00000423485.5

TOP2A-201, Transcript of DNA topoisomerase II alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TOP2A, Length 5,758 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP2A-201ENST00000423485 LEMD3Q9Y2U8 911 aa4.07□□□□□ -1.76
TOP2A-201ENST00000423485 ZHX2Q9Y6X8 837 aa4.07□□□□□ -1.76
TOP2A-201ENST00000423485 NSD2O96028 1365 aa4.07□□□□□ -1.76
TOP2A-201ENST00000423485 XPOTO43592 962 aaKnown RBP4.06□□□□□ -1.76
TOP2A-201ENST00000423485 MKRN4PQ13434 485 aaPredicted RBP4.06□□□□□ -1.76
TOP2A-201ENST00000423485 HEATR6Q6AI08 1181 aaKnown RBP4.06□□□□□ -1.76
TOP2A-201ENST00000423485 FILIP1Q7Z7B0 1213 aa4.06□□□□□ -1.76
TOP2A-201ENST00000423485 IQCA1Q86XH1 822 aa4.06□□□□□ -1.76
TOP2A-201ENST00000423485 CPXCR1Q8N123 301 aa4.06□□□□□ -1.76
TOP2A-201ENST00000423485 TIFAQ96CG3 184 aa4.06□□□□□ -1.76
TOP2A-201ENST00000423485 STN1Q9H668 368 aaKnown RBP4.06□□□□□ -1.76
TOP2A-201ENST00000423485 GRXCR2A6NFK2 248 aa4.06□□□□□ -1.76
TOP2A-201ENST00000423485 H7C1W4 665 aa4.06□□□□□ -1.76
TOP2A-201ENST00000423485 ELL2O00472 640 aaPredicted RBP4.06□□□□□ -1.76
TOP2A-201ENST00000423485 MAN1A1P33908 653 aa4.06□□□□□ -1.76
TOP2A-201ENST00000423485 YARSP54577 528 aaKnown RBP4.06□□□□□ -1.76
TOP2A-201ENST00000423485 NRLP54845 237 aa4.06□□□□□ -1.76
TOP2A-201ENST00000423485 IKBKEQ14164 716 aa4.06□□□□□ -1.76
TOP2A-201ENST00000423485 MYSM1Q5VVJ2 828 aa4.06□□□□□ -1.76
TOP2A-201ENST00000423485 PNMA5Q96PV4 448 aa4.06□□□□□ -1.76
TOP2A-201ENST00000423485 PCDHB15Q9Y5E8 787 aa4.06□□□□□ -1.76
TOP2A-201ENST00000423485 RPTORQ8N122 1335 aa4.06□□□□□ -1.76
TOP2A-201ENST00000423485 ZFYVE9O95405 1425 aa4.06□□□□□ -1.76
TOP2A-201ENST00000423485 C1QBPQ07021 282 aaKnown RBP4.06□□□□□ -1.76
TOP2A-201ENST00000423485 MTERF2Q49AM1 385 aa4.06□□□□□ -1.76
TOP2A-201ENST00000423485 RC3H1Q5TC82 1133 aaKnown RBP4.06□□□□□ -1.76
TOP2A-201ENST00000423485 RNF219Q5W0B1 726 aaPredicted RBP4.06□□□□□ -1.76
TOP2A-201ENST00000423485 STXBP4Q6ZWJ1 553 aa4.06□□□□□ -1.76
TOP2A-201ENST00000423485 C16orf59Q7L2K0 433 aa4.06□□□□□ -1.76
TOP2A-201ENST00000423485 PODNQ7Z5L7 613 aa4.06□□□□□ -1.76
TOP2A-201ENST00000423485 CLUAP1Q96AJ1 413 aa4.06□□□□□ -1.76
TOP2A-201ENST00000423485 COA1Q9GZY4 146 aa4.06□□□□□ -1.76
TOP2A-201ENST00000423485 NARFQ9UHQ1 456 aa4.06□□□□□ -1.76
TOP2A-201ENST00000423485 MLH3Q9UHC1 1453 aa4.06□□□□□ -1.76
TOP2A-201ENST00000423485 POMCP01189 267 aa4.06□□□□□ -1.76
TOP2A-201ENST00000423485 NNMTP40261 264 aa4.06□□□□□ -1.76
TOP2A-201ENST00000423485 CPT1AP50416 773 aa4.06□□□□□ -1.76
TOP2A-201ENST00000423485 SEPT6Q14141 434 aa4.06□□□□□ -1.76
TOP2A-201ENST00000423485 ITPRIPQ8IWB1 547 aa4.06□□□□□ -1.76
TOP2A-201ENST00000423485 SRPK1Q96SB4 655 aaKnown RBP4.06□□□□□ -1.76
TOP2A-201ENST00000423485 FERMT1Q9BQL6 677 aa4.06□□□□□ -1.76
TOP2A-201ENST00000423485 JPH2Q9BR39 696 aaPredicted RBP4.06□□□□□ -1.76
TOP2A-201ENST00000423485 TAF1DQ9H5J8 278 aaPredicted RBP4.06□□□□□ -1.76
TOP2A-201ENST00000423485 MTUS1Q9ULD2 1270 aa4.06□□□□□ -1.76
TOP2A-201ENST00000423485 HPS5Q9UPZ3 1129 aa4.06□□□□□ -1.76
TOP2A-201ENST00000423485 FARP1Q9Y4F1 1045 aaPredicted RBP4.06□□□□□ -1.76
TOP2A-201ENST00000423485 TACC3Q9Y6A5 838 aa4.06□□□□□ -1.76
TOP2A-201ENST00000423485 COMMD10Q9Y6G5 202 aa4.06□□□□□ -1.76
TOP2A-201ENST00000423485 UBR1Q8IWV7 1749 aa4.06□□□□□ -1.76
TOP2A-201ENST00000423485 MINDY4BA8MYZ0 360 aa4.06□□□□□ -1.76
TOP2A-201ENST00000423485 FOXN1O15353 648 aa4.06□□□□□ -1.76
TOP2A-201ENST00000423485 USH1GQ495M9 461 aa4.06□□□□□ -1.76
TOP2A-201ENST00000423485 ATAT1Q5SQI0 421 aa4.06□□□□□ -1.76
TOP2A-201ENST00000423485 MFSD14BQ5SR56 506 aa4.06□□□□□ -1.76
TOP2A-201ENST00000423485 B4GALNT3Q6L9W6 998 aa4.06□□□□□ -1.76
TOP2A-201ENST00000423485 ERO1BQ86YB8 467 aa4.06□□□□□ -1.76
TOP2A-201ENST00000423485 CCDC112Q8NEF3 446 aa4.06□□□□□ -1.76
TOP2A-201ENST00000423485 HLA-CQ95604 372 aa4.06□□□□□ -1.76
TOP2A-201ENST00000423485 GPR20Q99678 358 aa4.06□□□□□ -1.76
TOP2A-201ENST00000423485 PPP1R12CQ9BZL4 782 aa4.06□□□□□ -1.76
TOP2A-201ENST00000423485 ABCG4Q9H172 646 aa4.06□□□□□ -1.76
TOP2A-201ENST00000423485 ZNHIT6Q9NWK9 470 aaKnown RBP4.06□□□□□ -1.76
TOP2A-201ENST00000423485 DBF4Q9UBU7 674 aaPredicted RBP4.06□□□□□ -1.76
TOP2A-201ENST00000423485 CCDC171Q6TFL3 1326 aa4.06□□□□□ -1.76
TOP2A-201ENST00000423485 USP17L5A8MUK1 530 aa4.05□□□□□ -1.76
TOP2A-201ENST00000423485 TREHO43280 583 aa4.05□□□□□ -1.76
TOP2A-201ENST00000423485 XYLBO75191 536 aa4.05□□□□□ -1.76
TOP2A-201ENST00000423485 ACADMP11310 421 aa4.05□□□□□ -1.76
TOP2A-201ENST00000423485 GNSP15586 552 aa4.05□□□□□ -1.76
TOP2A-201ENST00000423485 CASTP20810 708 aaKnown RBP4.05□□□□□ -1.76
TOP2A-201ENST00000423485 CTNNB1P35222 781 aa4.05□□□□□ -1.76
TOP2A-201ENST00000423485 ZAP70P43403 619 aa4.05□□□□□ -1.76
TOP2A-201ENST00000423485 NEK4P51957 841 aa4.05□□□□□ -1.76
TOP2A-201ENST00000423485 TEAD4Q15561 434 aa4.05□□□□□ -1.76
TOP2A-201ENST00000423485 UAP1L1Q3KQV9 507 aa4.05□□□□□ -1.76
TOP2A-201ENST00000423485 TTC22Q5TAA0 569 aa4.05□□□□□ -1.76
TOP2A-201ENST00000423485 COL23A1Q86Y22 540 aaPredicted RBP4.05□□□□□ -1.76
TOP2A-201ENST00000423485 CCDC144CPQ8IYA2 1237 aa4.05□□□□□ -1.76
TOP2A-201ENST00000423485 LRRN4CLQ8ND94 238 aa4.05□□□□□ -1.76
TOP2A-201ENST00000423485 ARNTL2Q8WYA1 636 aa4.05□□□□□ -1.76
TOP2A-201ENST00000423485 EDC3Q96F86 508 aaKnown RBP4.05□□□□□ -1.76
TOP2A-201ENST00000423485 ADPGKQ9BRR6 497 aa4.05□□□□□ -1.76
TOP2A-201ENST00000423485 PHRF1Q9P1Y6 1649 aaKnown RBP4.05□□□□□ -1.76
TOP2A-201ENST00000423485 KLHL3Q9UH77 587 aa4.05□□□□□ -1.76
TOP2A-201ENST00000423485 GGT7Q9UJ14 662 aa4.05□□□□□ -1.76
TOP2A-201ENST00000423485 AK5Q9Y6K8 562 aa4.05□□□□□ -1.76
TOP2A-201ENST00000423485 SETBP1Q9Y6X0 1596 aa4.05□□□□□ -1.76
TOP2A-201ENST00000423485 A0A1B0GUL6 1792 aa4.05□□□□□ -1.76
TOP2A-201ENST00000423485 FAM208AQ9UK61 1670 aaKnown RBP4.05□□□□□ -1.76
TOP2A-201ENST00000423485 SPDYE3A6NKU9 549 aa4.05□□□□□ -1.76
TOP2A-201ENST00000423485 PARNO95453 639 aaKnown RBP4.05□□□□□ -1.76
TOP2A-201ENST00000423485 CREB1P16220 341 aa4.05□□□□□ -1.76
TOP2A-201ENST00000423485 DPP6P42658 865 aa4.05□□□□□ -1.76
TOP2A-201ENST00000423485 PHKA1P46020 1223 aa4.05□□□□□ -1.76
TOP2A-201ENST00000423485 ARHGEF16Q5VV41 709 aa4.05□□□□□ -1.76
TOP2A-201ENST00000423485 STK11IPQ8N1F8 1099 aa4.05□□□□□ -1.76
TOP2A-201ENST00000423485 CLASRPQ8N2M8 674 aaKnown RBP4.05□□□□□ -1.76
TOP2A-201ENST00000423485 AGBL3Q8NEM8 1001 aa4.05□□□□□ -1.76
TOP2A-201ENST00000423485 PRPF31Q8WWY3 499 aaKnown RBP4.05□□□□□ -1.76
TOP2A-201ENST00000423485 RPF1Q9H9Y2 349 aaKnown RBP4.05□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms