RNA–Protein interactions for RNA: ENST00000423325.6

SRPK1-205, Transcript of SRSF protein kinase 1, humanhuman

TSL 2 BASIC

Gene SRPK1, Length 4,357 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRPK1-205ENST00000423325 FAM196BA6NMK8 535 aa11.02□□□□□ -0.64
SRPK1-205ENST00000423325 TSPY3P0CV98 308 aa11.02□□□□□ -0.64
SRPK1-205ENST00000423325 TSPY8P0CW00 308 aa11.02□□□□□ -0.64
SRPK1-205ENST00000423325 KRBA2Q6ZNG9 492 aa11.02□□□□□ -0.64
SRPK1-205ENST00000423325 PIK3AP1Q6ZUJ8 805 aa11.02□□□□□ -0.64
SRPK1-205ENST00000423325 CEP95Q96GE4 821 aa11.02□□□□□ -0.64
SRPK1-205ENST00000423325 CUTAO60888 179 aa11.02□□□□□ -0.65
SRPK1-205ENST00000423325 SCG2P13521 617 aa11.02□□□□□ -0.65
SRPK1-205ENST00000423325 CTCFLQ8NI51 663 aaPredicted RBP11.02□□□□□ -0.65
SRPK1-205ENST00000423325 STAMQ92783 540 aa11.02□□□□□ -0.65
SRPK1-205ENST00000423325 DPF2Q92785 391 aa11.02□□□□□ -0.65
SRPK1-205ENST00000423325 TUBE1Q9UJT0 475 aa11.02□□□□□ -0.65
SRPK1-205ENST00000423325 TNS1Q9HBL0 1735 aaKnown RBP11.02□□□□□ -0.65
SRPK1-205ENST00000423325 PLSCR1O15162 318 aa11.02□□□□□ -0.65
SRPK1-205ENST00000423325 ZBTB22O15209 634 aa11.02□□□□□ -0.65
SRPK1-205ENST00000423325 KRT2P35908 639 aa11.02□□□□□ -0.65
SRPK1-205ENST00000423325 SAFBQ15424 915 aaKnown RBP eCLIP11.02□□□□□ -0.65
SRPK1-205ENST00000423325 PFKFB3Q16875 520 aaPredicted RBP11.02□□□□□ -0.65
SRPK1-205ENST00000423325 KAT14Q9H8E8 782 aa11.02□□□□□ -0.65
SRPK1-205ENST00000423325 ANO10Q9NW15 660 aa11.02□□□□□ -0.65
SRPK1-205ENST00000423325 R3HCC1Q9Y3T6 440 aaKnown RBP11.02□□□□□ -0.65
SRPK1-205ENST00000423325 ACTN4O43707 911 aaKnown RBP11.02□□□□□ -0.65
SRPK1-205ENST00000423325 BAG3O95817 575 aa11.02□□□□□ -0.65
SRPK1-205ENST00000423325 PCP11498 1178 aaKnown RBP11.02□□□□□ -0.65
SRPK1-205ENST00000423325 RILPL1Q5EBL4 403 aa11.02□□□□□ -0.65
SRPK1-205ENST00000423325 WWC2Q6AWC2 1192 aa11.02□□□□□ -0.65
SRPK1-205ENST00000423325 C16orf86Q6ZW13 317 aa11.02□□□□□ -0.65
SRPK1-205ENST00000423325 ZNF622Q969S3 477 aaKnown RBP eCLIP11.01□□□□□ -0.655e-8■■□□□ 12.2
SRPK1-205ENST00000423325 EYA3Q99504 573 aa11.01□□□□□ -0.65
SRPK1-205ENST00000423325 CLIP2Q9UDT6 1046 aa11.01□□□□□ -0.65
SRPK1-205ENST00000423325 COBLO75128 1261 aa11.01□□□□□ -0.65
SRPK1-205ENST00000423325 AKAP17AQ02040 695 aaKnown RBP11.01□□□□□ -0.65
SRPK1-205ENST00000423325 RGS22Q8NE09 1264 aa11.01□□□□□ -0.65
SRPK1-205ENST00000423325 KIAA1524Q8TCG1 905 aa11.01□□□□□ -0.65
SRPK1-205ENST00000423325 RBM28Q9NW13 759 aaKnown RBP11.01□□□□□ -0.65
SRPK1-205ENST00000423325 ZNF646O15015 1829 aaPredicted RBP11.01□□□□□ -0.65
SRPK1-205ENST00000423325 LMOD1P29536 600 aaPredicted RBP11.01□□□□□ -0.65
SRPK1-205ENST00000423325 NLRP12P59046 1061 aa11.01□□□□□ -0.65
SRPK1-205ENST00000423325 FMR1Q06787 632 aaKnown RBP eCLIP11.01□□□□□ -0.65
SRPK1-205ENST00000423325 EZH2Q15910 746 aaKnown RBP11.01□□□□□ -0.65
SRPK1-205ENST00000423325 TTF2Q9UNY4 1162 aaKnown RBP11.01□□□□□ -0.65
SRPK1-205ENST00000423325 SRPRBQ9Y5M8 271 aaKnown RBP11.01□□□□□ -0.65
SRPK1-205ENST00000423325 AKR1B1P15121 316 aa11□□□□□ -0.65
SRPK1-205ENST00000423325 GSTO1P78417 241 aa11□□□□□ -0.65
SRPK1-205ENST00000423325 GRM4Q14833 912 aa11□□□□□ -0.65
SRPK1-205ENST00000423325 CEP57L1Q8IYX8 460 aa11□□□□□ -0.65
SRPK1-205ENST00000423325 LRRC15Q8TF66 581 aa11□□□□□ -0.65
SRPK1-205ENST00000423325 UBA5Q9GZZ9 404 aa11□□□□□ -0.65
SRPK1-205ENST00000423325 PCNTO95613 3336 aa11□□□□□ -0.65
SRPK1-205ENST00000423325 PTGDRQ13258 359 aa11□□□□□ -0.65
SRPK1-205ENST00000423325 NOLC1Q14978 699 aaKnown RBP eCLIP11□□□□□ -0.651e-5■□□□□ 10.6
SRPK1-205ENST00000423325 POTEAQ6S8J7 498 aa11□□□□□ -0.65
SRPK1-205ENST00000423325 DPP8Q6V1X1 898 aaPredicted RBP11□□□□□ -0.65
SRPK1-205ENST00000423325 DGKHQ86XP1 1220 aa11□□□□□ -0.65
SRPK1-205ENST00000423325 CNNM3Q8NE01 707 aa11□□□□□ -0.65
SRPK1-205ENST00000423325 TSC1Q92574 1164 aa11□□□□□ -0.65
SRPK1-205ENST00000423325 SYMPKQ92797 1274 aaKnown RBP11□□□□□ -0.65
SRPK1-205ENST00000423325 FAM163AQ96GL9 167 aaPredicted RBP11□□□□□ -0.65
SRPK1-205ENST00000423325 MTRQ99707 1265 aa11□□□□□ -0.65
SRPK1-205ENST00000423325 USP17L5A8MUK1 530 aa11□□□□□ -0.65
SRPK1-205ENST00000423325 M0R2N6 131 aa11□□□□□ -0.65
SRPK1-205ENST00000423325 MCM7P33993 719 aa11□□□□□ -0.65
SRPK1-205ENST00000423325 EN1Q05925 392 aaPredicted RBP11□□□□□ -0.65
SRPK1-205ENST00000423325 KIAA2012Q0VF49 1180 aa11□□□□□ -0.65
SRPK1-205ENST00000423325 FRMPD2Q68DX3 1309 aaPredicted RBP11□□□□□ -0.65
SRPK1-205ENST00000423325 APOBEC3HQ6NTF7 200 aaKnown RBP11□□□□□ -0.65
SRPK1-205ENST00000423325 DRC7Q8IY82 874 aa11□□□□□ -0.65
SRPK1-205ENST00000423325 TRMT44Q8IYL2 757 aaKnown RBP11□□□□□ -0.65
SRPK1-205ENST00000423325 LRRC47Q8N1G4 583 aaKnown RBP11□□□□□ -0.65
SRPK1-205ENST00000423325 NLGN1Q8N2Q7 840 aa11□□□□□ -0.65
SRPK1-205ENST00000423325 ANKS1AQ92625 1134 aa11□□□□□ -0.65
SRPK1-205ENST00000423325 PALM3A6NDB9 673 aaPredicted RBP11□□□□□ -0.65
SRPK1-205ENST00000423325 TRIM75PA6NK02 468 aa11□□□□□ -0.65
SRPK1-205ENST00000423325 PP2D1A8MPX8 630 aa11□□□□□ -0.65
SRPK1-205ENST00000423325 GOLGA6L19H0YKK7 550 aa11□□□□□ -0.65
SRPK1-205ENST00000423325 NPR1P16066 1061 aa11□□□□□ -0.65
SRPK1-205ENST00000423325 NLRP5P59047 1200 aa11□□□□□ -0.65
SRPK1-205ENST00000423325 GOLGA8FQ08AF8 430 aa11□□□□□ -0.65
SRPK1-205ENST00000423325 GOLGA8DPQ0D2H9 430 aa11□□□□□ -0.65
SRPK1-205ENST00000423325 SARM1Q6SZW1 724 aa11□□□□□ -0.65
SRPK1-205ENST00000423325 ZNF444Q8N0Y2 327 aaPredicted RBP11□□□□□ -0.65
SRPK1-205ENST00000423325 KLHL34Q8N239 644 aa11□□□□□ -0.65
SRPK1-205ENST00000423325 DNAJC18Q9H819 358 aa11□□□□□ -0.65
SRPK1-205ENST00000423325 SIPA1L1O43166 1804 aa10.99□□□□□ -0.65
SRPK1-205ENST00000423325 VWA3AA6NCI4 1184 aa10.99□□□□□ -0.65
SRPK1-205ENST00000423325 USP27XA6NNY8 438 aa10.99□□□□□ -0.65
SRPK1-205ENST00000423325 BECN2A8MW95 431 aa10.99□□□□□ -0.65
SRPK1-205ENST00000423325 CALM1P0DP23 149 aa10.99□□□□□ -0.65
SRPK1-205ENST00000423325 CALM2P0DP24 149 aa10.99□□□□□ -0.65
SRPK1-205ENST00000423325 CALM3P0DP25 149 aa10.99□□□□□ -0.65
SRPK1-205ENST00000423325 SMYD4Q8IYR2 804 aaPredicted RBP10.99□□□□□ -0.65
SRPK1-205ENST00000423325 DHX58Q96C10 678 aa10.99□□□□□ -0.65
SRPK1-205ENST00000423325 XPO4Q9C0E2 1151 aaKnown RBP10.99□□□□□ -0.65
SRPK1-205ENST00000423325 TMEM60Q9H2L4 133 aa10.99□□□□□ -0.65
SRPK1-205ENST00000423325 MAN1B1Q9UKM7 699 aa10.99□□□□□ -0.65
SRPK1-205ENST00000423325 GABPAQ06546 454 aa10.99□□□□□ -0.65
SRPK1-205ENST00000423325 TTC38Q5R3I4 469 aa10.99□□□□□ -0.65
SRPK1-205ENST00000423325 CDC42EP5Q6NZY7 148 aa10.99□□□□□ -0.65
SRPK1-205ENST00000423325 FILIP1Q7Z7B0 1213 aa10.99□□□□□ -0.65
SRPK1-205ENST00000423325 HOMER1Q86YM7 354 aa10.99□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms