RNA–Protein interactions for RNA: ENST00000422121.2

NF1-203, Transcript of neurofibromin 1, humanhuman

TSL 3

Gene NF1, Length 619 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NF1-203ENST00000422121 STK11IPQ8N1F8 1099 aa11.85□□□□□ -0.51
NF1-203ENST00000422121 IL25Q9H293 177 aa11.85□□□□□ -0.51
NF1-203ENST00000422121 TXNRD2Q9NNW7 524 aa11.85□□□□□ -0.51
NF1-203ENST00000422121 IGKV6D-41A0A0C4DH26 115 aa11.84□□□□□ -0.51
NF1-203ENST00000422121 TRIM6-TRIM34B2RNG4 842 aa11.84□□□□□ -0.51
NF1-203ENST00000422121 PSMC4P43686 418 aa11.84□□□□□ -0.51
NF1-203ENST00000422121 ZYXQ15942 572 aaKnown RBP11.84□□□□□ -0.51
NF1-203ENST00000422121 MCMDC2Q4G0Z9 681 aa11.84□□□□□ -0.51
NF1-203ENST00000422121 USP17L2Q6R6M4 530 aa11.84□□□□□ -0.51
NF1-203ENST00000422121 TMEM179Q6ZVK1 233 aa11.84□□□□□ -0.51
NF1-203ENST00000422121 NKX2-3Q8TAU0 364 aa11.84□□□□□ -0.51
NF1-203ENST00000422121 RILPL2Q969X0 211 aa11.84□□□□□ -0.51
NF1-203ENST00000422121 CCDC17Q96LX7 622 aa11.84□□□□□ -0.51
NF1-203ENST00000422121 CABP5Q9NP86 173 aa11.84□□□□□ -0.51
NF1-203ENST00000422121 RBPJLQ9UBG7 517 aa11.84□□□□□ -0.51
NF1-203ENST00000422121 CCDC85CA6NKD9 419 aa11.83□□□□□ -0.52
NF1-203ENST00000422121 MPHOSPH10O00566 681 aaKnown RBP11.83□□□□□ -0.52
NF1-203ENST00000422121 PRDM1O75626 825 aa11.83□□□□□ -0.52
NF1-203ENST00000422121 FGAP02671 866 aa11.83□□□□□ -0.52
NF1-203ENST00000422121 APPP05067 770 aa11.83□□□□□ -0.52
NF1-203ENST00000422121 HSPD1P10809 573 aaKnown RBP11.83□□□□□ -0.52
NF1-203ENST00000422121 VCAM1P19320 739 aa11.83□□□□□ -0.52
NF1-203ENST00000422121 TDO2P48775 406 aa11.83□□□□□ -0.52
NF1-203ENST00000422121 ALX1Q15699 326 aa11.83□□□□□ -0.52
NF1-203ENST00000422121 Q3C1V9 767 aa11.83□□□□□ -0.52
NF1-203ENST00000422121 TTC22Q5TAA0 569 aa11.83□□□□□ -0.52
NF1-203ENST00000422121 CATSPERGQ6ZRH7 1159 aa11.83□□□□□ -0.52
NF1-203ENST00000422121 ANKRD13CQ8N6S4 541 aa11.83□□□□□ -0.52
NF1-203ENST00000422121 MFRPQ9BY79 579 aa11.83□□□□□ -0.52
NF1-203ENST00000422121 TMOD4Q9NZQ9 345 aa11.83□□□□□ -0.52
NF1-203ENST00000422121 METRNQ9UJH8 293 aa11.83□□□□□ -0.52
NF1-203ENST00000422121 DDX52Q9Y2R4 599 aaKnown RBP eCLIP11.83□□□□□ -0.52
NF1-203ENST00000422121 TMX2Q9Y320 296 aa11.83□□□□□ -0.52
NF1-203ENST00000422121 GREB1LQ9C091 1923 aaPredicted RBP11.82□□□□□ -0.52
NF1-203ENST00000422121 CNMDO75829 334 aa11.82□□□□□ -0.52
NF1-203ENST00000422121 FGRP09769 529 aa11.82□□□□□ -0.52
NF1-203ENST00000422121 EEF2P13639 858 aaKnown RBP11.82□□□□□ -0.52
NF1-203ENST00000422121 OSBPP22059 807 aa11.82□□□□□ -0.52
NF1-203ENST00000422121 ATN1P54259 1190 aaPredicted RBP11.82□□□□□ -0.52
NF1-203ENST00000422121 HERVK_113P62684 666 aa11.82□□□□□ -0.52
NF1-203ENST00000422121 PPARAQ07869 468 aa11.82□□□□□ -0.52
NF1-203ENST00000422121 DDRGK1Q96HY6 314 aa11.82□□□□□ -0.52
NF1-203ENST00000422121 NBPF3Q9H094 633 aa11.82□□□□□ -0.52
NF1-203ENST00000422121 MORF4L1Q9UBU8 362 aa11.82□□□□□ -0.52
NF1-203ENST00000422121 GABRQQ9UN88 632 aa11.82□□□□□ -0.52
NF1-203ENST00000422121 PTCH2Q9Y6C5 1203 aa11.82□□□□□ -0.52
NF1-203ENST00000422121 CTDSPL2Q05D32 466 aa11.81□□□□□ -0.52
NF1-203ENST00000422121 FAM110CQ1W6H9 321 aa11.81□□□□□ -0.52
NF1-203ENST00000422121 AMOTL1Q8IY63 956 aa11.81□□□□□ -0.52
NF1-203ENST00000422121 SMCR8Q8TEV9 937 aaPredicted RBP11.81□□□□□ -0.52
NF1-203ENST00000422121 ARMC5Q96C12 935 aa11.81□□□□□ -0.52
NF1-203ENST00000422121 FEZ1Q99689 392 aa11.81□□□□□ -0.52
NF1-203ENST00000422121 NACAP1Q9BZK3 213 aa11.81□□□□□ -0.52
NF1-203ENST00000422121 NAPBQ9H115 298 aa11.81□□□□□ -0.52
NF1-203ENST00000422121 KANSL2Q9H9L4 492 aa11.81□□□□□ -0.52
NF1-203ENST00000422121 SRRDQ9UH36 339 aa11.81□□□□□ -0.52
NF1-203ENST00000422121 ANAPC4Q9UJX5 808 aa11.81□□□□□ -0.52
NF1-203ENST00000422121 GJD2Q9UKL4 321 aa11.81□□□□□ -0.52
NF1-203ENST00000422121 PNMA3Q9UL41 463 aa11.81□□□□□ -0.52
NF1-203ENST00000422121 RLFQ13129 1914 aa11.81□□□□□ -0.52
NF1-203ENST00000422121 USP17L15C9J2P7 530 aa11.8□□□□□ -0.52
NF1-203ENST00000422121 USP17L13C9JLJ4 530 aa11.8□□□□□ -0.52
NF1-203ENST00000422121 USP17L11C9JVI0 530 aa11.8□□□□□ -0.52
NF1-203ENST00000422121 USP17L18D6R9N7 530 aa11.8□□□□□ -0.52
NF1-203ENST00000422121 USP17L22D6RA61 530 aa11.8□□□□□ -0.52
NF1-203ENST00000422121 USP17L17D6RBQ6 530 aa11.8□□□□□ -0.52
NF1-203ENST00000422121 USP17L19D6RCP7 530 aa11.8□□□□□ -0.52
NF1-203ENST00000422121 USP17L20D6RJB6 530 aa11.8□□□□□ -0.52
NF1-203ENST00000422121 FMNL1O95466 1100 aaPredicted RBP11.8□□□□□ -0.52
NF1-203ENST00000422121 GCLCP48506 637 aaPredicted RBP11.8□□□□□ -0.52
NF1-203ENST00000422121 RGS19P49795 217 aa11.8□□□□□ -0.52
NF1-203ENST00000422121 USP14P54578 494 aa11.8□□□□□ -0.52
NF1-203ENST00000422121 ICA1Q05084 483 aa11.8□□□□□ -0.52
NF1-203ENST00000422121 PRKCZQ05513 592 aa11.8□□□□□ -0.52
NF1-203ENST00000422121 USP17L24Q0WX57 530 aa11.8□□□□□ -0.52
NF1-203ENST00000422121 PABPC4Q13310 644 aaKnown RBP eCLIP11.8□□□□□ -0.52
NF1-203ENST00000422121 FAM47AQ5JRC9 791 aa11.8□□□□□ -0.52
NF1-203ENST00000422121 CWC27Q6UX04 472 aaKnown RBP11.8□□□□□ -0.52
NF1-203ENST00000422121 SPICE1Q8N0Z3 855 aa11.8□□□□□ -0.52
NF1-203ENST00000422121 RPAP3Q9H6T3 665 aaPredicted RBP11.8□□□□□ -0.52
NF1-203ENST00000422121 MKNK2Q9HBH9 465 aa11.8□□□□□ -0.52
NF1-203ENST00000422121 IL17RBQ9NRM6 502 aa11.8□□□□□ -0.52
NF1-203ENST00000422121 DOCK3Q8IZD9 2030 aa11.8□□□□□ -0.52
NF1-203ENST00000422121 CCDC171Q6TFL3 1326 aa11.8□□□□□ -0.52
NF1-203ENST00000422121 SPDYE16A6NNV3 312 aaPredicted RBP11.79□□□□□ -0.52
NF1-203ENST00000422121 GNRH1P01148 92 aa11.79□□□□□ -0.52
NF1-203ENST00000422121 IRX3P78415 501 aaPredicted RBP11.79□□□□□ -0.52
NF1-203ENST00000422121 LBX2Q6XYB7 198 aa11.79□□□□□ -0.52
NF1-203ENST00000422121 EFCAB3Q8N7B9 438 aa11.79□□□□□ -0.52
NF1-203ENST00000422121 NEDD1Q8NHV4 660 aa11.79□□□□□ -0.52
NF1-203ENST00000422121 MKL1Q969V6 931 aa11.79□□□□□ -0.52
NF1-203ENST00000422121 CEP95Q96GE4 821 aa11.79□□□□□ -0.52
NF1-203ENST00000422121 PORCNQ9H237 461 aa11.79□□□□□ -0.52
NF1-203ENST00000422121 VCPKMTQ9H867 229 aa11.79□□□□□ -0.52
NF1-203ENST00000422121 BTBD7Q9P203 1132 aa11.79□□□□□ -0.52
NF1-203ENST00000422121 MYH8P13535 1937 aa11.79□□□□□ -0.52
NF1-203ENST00000422121 MGAMO43451 1857 aa11.78□□□□□ -0.52
NF1-203ENST00000422121 CHMLP26374 656 aa11.78□□□□□ -0.52
NF1-203ENST00000422121 NOVP48745 357 aa11.78□□□□□ -0.52
NF1-203ENST00000422121 FLT3LGP49771 235 aa11.78□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms