RNA–Protein interactions for RNA: ENST00000422006.5

SSB-205, Transcript of Sjogren syndrome antigen B, humanhuman

TSL 5

Gene SSB, Length 2,463 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSB-205ENST00000422006 TPCN1Q9ULQ1 816 aa9.78□□□□□ -0.84
SSB-205ENST00000422006 PARP3Q9Y6F1 533 aa9.78□□□□□ -0.84
SSB-205ENST00000422006 LY75O60449 1722 aa9.77□□□□□ -0.84
SSB-205ENST00000422006 PHACTR2O75167 634 aa9.77□□□□□ -0.85
SSB-205ENST00000422006 URI1O94763 535 aaPredicted RBP9.77□□□□□ -0.85
SSB-205ENST00000422006 U2AF1L5P0DN76 240 aaPredicted RBP9.77□□□□□ -0.85
SSB-205ENST00000422006 XBP1P17861 261 aa9.77□□□□□ -0.85
SSB-205ENST00000422006 SLC8A1P32418 973 aa9.77□□□□□ -0.85
SSB-205ENST00000422006 TXLNAP40222 546 aa9.77□□□□□ -0.85
SSB-205ENST00000422006 USP5P45974 858 aa9.77□□□□□ -0.85
SSB-205ENST00000422006 INHBCP55103 352 aa9.77□□□□□ -0.85
SSB-205ENST00000422006 MARSP56192 900 aaKnown RBP9.77□□□□□ -0.85
SSB-205ENST00000422006 FOXK1P85037 733 aa9.77□□□□□ -0.85
SSB-205ENST00000422006 U2AF1Q01081 240 aaKnown RBP eCLIP9.77□□□□□ -0.853e-12■□□□□ 10
SSB-205ENST00000422006 Q4G0T1 1027 aa9.77□□□□□ -0.85
SSB-205ENST00000422006 TMEM132EQ6IEE7 984 aa9.77□□□□□ -0.85
SSB-205ENST00000422006 NEK9Q8TD19 979 aa9.77□□□□□ -0.85
SSB-205ENST00000422006 CFAP53Q96M91 514 aa9.77□□□□□ -0.85
SSB-205ENST00000422006 VCPKMTQ9H867 229 aa9.77□□□□□ -0.85
SSB-205ENST00000422006 IQSEC3Q9UPP2 1182 aaPredicted RBP9.77□□□□□ -0.85
SSB-205ENST00000422006 PPME1Q9Y570 386 aa9.77□□□□□ -0.85
SSB-205ENST00000422006 PNPLA7Q6ZV29 1317 aa9.77□□□□□ -0.85
SSB-205ENST00000422006 WDR33Q9C0J8 1336 aaKnown RBP9.77□□□□□ -0.85
SSB-205ENST00000422006 A0A1B0GVG6 124 aa9.77□□□□□ -0.85
SSB-205ENST00000422006 GOLGA6L10A6NI86 522 aa9.77□□□□□ -0.85
SSB-205ENST00000422006 GOLGA6L19H0YKK7 550 aa9.77□□□□□ -0.85
SSB-205ENST00000422006 KIAA0754O94854 1291 aa9.77□□□□□ -0.85
SSB-205ENST00000422006 GNAT1P11488 350 aa9.77□□□□□ -0.85
SSB-205ENST00000422006 ARHGAP25P42331 645 aa9.77□□□□□ -0.85
SSB-205ENST00000422006 KCNJ6P48051 423 aa9.77□□□□□ -0.85
SSB-205ENST00000422006 SARM1Q6SZW1 724 aa9.77□□□□□ -0.85
SSB-205ENST00000422006 GALNT15Q8N3T1 639 aa9.77□□□□□ -0.85
SSB-205ENST00000422006 VTI1AQ96AJ9 217 aa9.77□□□□□ -0.85
SSB-205ENST00000422006 DTNBP1Q96EV8 351 aa9.77□□□□□ -0.85
SSB-205ENST00000422006 CENPHQ9H3R5 247 aa9.77□□□□□ -0.85
SSB-205ENST00000422006 SLC40A1Q9NP59 571 aa9.77□□□□□ -0.85
SSB-205ENST00000422006 L1RE1Q9UN81 338 aa9.77□□□□□ -0.85
SSB-205ENST00000422006 KIAA1210Q9ULL0 1709 aa9.77□□□□□ -0.85
SSB-205ENST00000422006 ST20-MTHFSA0A0A6YYL1 179 aa9.76□□□□□ -0.85
SSB-205ENST00000422006 SOWAHDA6NJG2 315 aa9.76□□□□□ -0.85
SSB-205ENST00000422006 PPFIA3O75145 1194 aa9.76□□□□□ -0.85
SSB-205ENST00000422006 RNF40O75150 1001 aa9.76□□□□□ -0.85
SSB-205ENST00000422006 PABPC4Q13310 644 aaKnown RBP eCLIP9.76□□□□□ -0.85
SSB-205ENST00000422006 CUL3Q13618 768 aa9.76□□□□□ -0.85
SSB-205ENST00000422006 E2F5Q15329 346 aa9.76□□□□□ -0.85
SSB-205ENST00000422006 COL13A1Q5TAT6 717 aaPredicted RBP9.76□□□□□ -0.85
SSB-205ENST00000422006 CCDC170Q8IYT3 715 aa9.76□□□□□ -0.85
SSB-205ENST00000422006 ABTB2Q8N961 1025 aa9.76□□□□□ -0.85
SSB-205ENST00000422006 INTS4Q96HW7 963 aaKnown RBP9.76□□□□□ -0.85
SSB-205ENST00000422006 APAF1O14727 1248 aa9.76□□□□□ -0.85
SSB-205ENST00000422006 LIN7AO14910 233 aaPredicted RBP9.76□□□□□ -0.85
SSB-205ENST00000422006 MEFVO15553 781 aaPredicted RBP9.76□□□□□ -0.85
SSB-205ENST00000422006 ERLIN1O75477 346 aa9.76□□□□□ -0.85
SSB-205ENST00000422006 PRPF6O94906 941 aaKnown RBP9.76□□□□□ -0.85
SSB-205ENST00000422006 GNAI3P08754 354 aa9.76□□□□□ -0.85
SSB-205ENST00000422006 LINGO3P0C6S8 592 aa9.76□□□□□ -0.85
SSB-205ENST00000422006 ANO6Q4KMQ2 910 aa9.76□□□□□ -0.85
SSB-205ENST00000422006 RIC3Q7Z5B4 369 aa9.76□□□□□ -0.85
SSB-205ENST00000422006 METTL3Q86U44 580 aaKnown RBP9.76□□□□□ -0.85
SSB-205ENST00000422006 PLPP6Q8IY26 295 aa9.76□□□□□ -0.85
SSB-205ENST00000422006 GOLGA1Q92805 767 aa9.76□□□□□ -0.85
SSB-205ENST00000422006 EVI5LQ96CN4 794 aa9.76□□□□□ -0.85
SSB-205ENST00000422006 ACSBG1Q96GR2 724 aa9.76□□□□□ -0.85
SSB-205ENST00000422006 ABCF2Q9UG63 623 aa9.76□□□□□ -0.85
SSB-205ENST00000422006 FANCGO15287 622 aa9.75□□□□□ -0.85
SSB-205ENST00000422006 KIF5CO60282 957 aa9.75□□□□□ -0.85
SSB-205ENST00000422006 FLT3P36888 993 aa9.75□□□□□ -0.85
SSB-205ENST00000422006 PPP2R3AQ06190 1150 aa9.75□□□□□ -0.85
SSB-205ENST00000422006 MAP3K11Q16584 847 aa9.75□□□□□ -0.85
SSB-205ENST00000422006 SPATS2Q86XZ4 545 aaKnown RBP9.75□□□□□ -0.85
SSB-205ENST00000422006 SYCP3Q8IZU3 236 aa9.75□□□□□ -0.85
SSB-205ENST00000422006 SMC1BQ8NDV3 1235 aa9.75□□□□□ -0.85
SSB-205ENST00000422006 HDAC7Q8WUI4 952 aa9.75□□□□□ -0.85
SSB-205ENST00000422006 SPAG5Q96R06 1193 aa9.75□□□□□ -0.85
SSB-205ENST00000422006 TSC22D3Q99576 134 aa9.75□□□□□ -0.85
SSB-205ENST00000422006 SRCIN1Q9C0H9 1055 aa9.75□□□□□ -0.85
SSB-205ENST00000422006 PDGFDQ9GZP0 370 aaPredicted RBP9.75□□□□□ -0.85
SSB-205ENST00000422006 BARX2Q9UMQ3 279 aaPredicted RBP9.75□□□□□ -0.85
SSB-205ENST00000422006 RABL2BQ9UNT1 228 aa9.75□□□□□ -0.85
SSB-205ENST00000422006 WDR37Q9Y2I8 494 aa9.75□□□□□ -0.85
SSB-205ENST00000422006 SUGT1Q9Y2Z0 365 aa9.75□□□□□ -0.85
SSB-205ENST00000422006 TTC21AQ8NDW8 1320 aa9.75□□□□□ -0.85
SSB-205ENST00000422006 B4DLN1 442 aa9.75□□□□□ -0.85
SSB-205ENST00000422006 MYO1BO43795 1136 aa9.75□□□□□ -0.85
SSB-205ENST00000422006 KRT38O76015 456 aa9.75□□□□□ -0.85
SSB-205ENST00000422006 NAT2P11245 290 aa9.75□□□□□ -0.85
SSB-205ENST00000422006 IRAK1P51617 712 aa9.75□□□□□ -0.85
SSB-205ENST00000422006 KBTBD12Q3ZCT8 623 aa9.75□□□□□ -0.85
SSB-205ENST00000422006 TRIM65Q6PJ69 517 aa9.75□□□□□ -0.85
SSB-205ENST00000422006 YTHDF3Q7Z739 585 aaKnown RBP9.75□□□□□ -0.85
SSB-205ENST00000422006 CCDC146Q8IYE0 955 aa9.75□□□□□ -0.85
SSB-205ENST00000422006 MYOCDQ8IZQ8 938 aa9.75□□□□□ -0.85
SSB-205ENST00000422006 CCDC47Q96A33 483 aaKnown RBP9.75□□□□□ -0.85
SSB-205ENST00000422006 ZCWPW1Q9H0M4 648 aa9.75□□□□□ -0.85
SSB-205ENST00000422006 INCENPQ9NQS7 918 aa9.75□□□□□ -0.85
SSB-205ENST00000422006 ATP8A1Q9Y2Q0 1164 aa9.75□□□□□ -0.85
SSB-205ENST00000422006 CDHR2Q9BYE9 1310 aa9.75□□□□□ -0.85
SSB-205ENST00000422006 ZSCAN12O43309 604 aa9.74□□□□□ -0.85
SSB-205ENST00000422006 MBD4O95243 580 aa9.74□□□□□ -0.85
SSB-205ENST00000422006 GSDMDP57764 484 aa9.74□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms