RNA–Protein interactions for RNA: ENST00000421816.6

GCDH-202, Transcript of glutaryl-CoA dehydrogenase, humanhuman

TSL 2

Gene GCDH, Length 1,109 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCDH-202ENST00000421816 ZNF296Q8WUU4 475 aaPredicted RBP22.86■■□□□ 1.25
GCDH-202ENST00000421816 LPAR1Q92633 364 aa22.86■■□□□ 1.25
GCDH-202ENST00000421816 ESR2Q92731 530 aa22.86■■□□□ 1.25
GCDH-202ENST00000421816 ASCC2Q9H1I8 757 aaPredicted RBP22.86■■□□□ 1.25
GCDH-202ENST00000421816 NMT2O60551 498 aa22.85■■□□□ 1.25
GCDH-202ENST00000421816 NECTIN1Q15223 517 aa22.85■■□□□ 1.25
GCDH-202ENST00000421816 C17orf99Q6UX52 265 aa22.85■■□□□ 1.25
GCDH-202ENST00000421816 CNNM2Q9H8M5 875 aa22.85■■□□□ 1.25
GCDH-202ENST00000421816 TAF6LQ9Y6J9 622 aa22.85■■□□□ 1.25
GCDH-202ENST00000421816 USP17L15C9J2P7 530 aa22.84■■□□□ 1.25
GCDH-202ENST00000421816 USP17L13C9JLJ4 530 aa22.84■■□□□ 1.25
GCDH-202ENST00000421816 USP17L11C9JVI0 530 aa22.84■■□□□ 1.25
GCDH-202ENST00000421816 USP17L18D6R9N7 530 aa22.84■■□□□ 1.25
GCDH-202ENST00000421816 USP17L22D6RA61 530 aa22.84■■□□□ 1.25
GCDH-202ENST00000421816 USP17L17D6RBQ6 530 aa22.84■■□□□ 1.25
GCDH-202ENST00000421816 USP17L19D6RCP7 530 aa22.84■■□□□ 1.25
GCDH-202ENST00000421816 USP17L20D6RJB6 530 aa22.84■■□□□ 1.25
GCDH-202ENST00000421816 FKTNO75072 461 aa22.84■■□□□ 1.25
GCDH-202ENST00000421816 USP17L24Q0WX57 530 aa22.84■■□□□ 1.25
GCDH-202ENST00000421816 CATSPERGQ6ZRH7 1159 aa22.84■■□□□ 1.25
GCDH-202ENST00000421816 KRT23Q9C075 422 aa22.84■■□□□ 1.25
GCDH-202ENST00000421816 RPAP3Q9H6T3 665 aaPredicted RBP22.84■■□□□ 1.25
GCDH-202ENST00000421816 GOPCQ9HD26 462 aa22.84■■□□□ 1.25
GCDH-202ENST00000421816 PARP14Q460N5 1801 aa22.83■■□□□ 1.25
GCDH-202ENST00000421816 RLFQ13129 1914 aa22.83■■□□□ 1.25
GCDH-202ENST00000421816 B4E1Z4 1266 aa22.83■■□□□ 1.25
GCDH-202ENST00000421816 KDM4AO75164 1064 aa22.83■■□□□ 1.25
GCDH-202ENST00000421816 BCRP11274 1271 aa22.83■■□□□ 1.25
GCDH-202ENST00000421816 IRX3P78415 501 aaPredicted RBP22.83■■□□□ 1.25
GCDH-202ENST00000421816 CPA4Q9UI42 421 aa22.83■■□□□ 1.25
GCDH-202ENST00000421816 E7EWF7 191 aa22.82■■□□□ 1.24
GCDH-202ENST00000421816 F5H6K3 240 aa22.82■■□□□ 1.24
GCDH-202ENST00000421816 SLC27A2O14975 620 aa22.82■■□□□ 1.24
GCDH-202ENST00000421816 WDR46O15213 610 aaKnown RBP22.82■■□□□ 1.24
GCDH-202ENST00000421816 SP3Q02447 781 aa22.82■■□□□ 1.24
GCDH-202ENST00000421816 KLRC3Q07444 240 aa22.82■■□□□ 1.24
GCDH-202ENST00000421816 STOX1Q6ZVD7 989 aa22.82■■□□□ 1.24
GCDH-202ENST00000421816 SPICE1Q8N0Z3 855 aa22.82■■□□□ 1.24
GCDH-202ENST00000421816 GMCL1P1Q8NEA9 526 aa22.82■■□□□ 1.24
GCDH-202ENST00000421816 SMCR8Q8TEV9 937 aaPredicted RBP22.82■■□□□ 1.24
GCDH-202ENST00000421816 P2RX7Q99572 595 aaKnown RBP22.82■■□□□ 1.24
GCDH-202ENST00000421816 ZSWIM5Q9P217 1185 aa22.82■■□□□ 1.24
GCDH-202ENST00000421816 CREB3L3Q68CJ9 461 aa22.81■■□□□ 1.24
GCDH-202ENST00000421816 RCSD1Q6JBY9 416 aa22.81■■□□□ 1.24
GCDH-202ENST00000421816 LRRC47Q8N1G4 583 aaKnown RBP22.81■■□□□ 1.24
GCDH-202ENST00000421816 TTC14Q96N46 770 aa22.81■■□□□ 1.24
GCDH-202ENST00000421816 STX8Q9UNK0 236 aa22.81■■□□□ 1.24
GCDH-202ENST00000421816 NDUFB10O96000 172 aa22.8■■□□□ 1.24
GCDH-202ENST00000421816 GCLCP48506 637 aaPredicted RBP22.8■■□□□ 1.24
GCDH-202ENST00000421816 HERVK_113P62684 666 aa22.8■■□□□ 1.24
GCDH-202ENST00000421816 REC8O95072 547 aa22.79■■□□□ 1.24
GCDH-202ENST00000421816 TRDNQ13061 729 aa22.79■■□□□ 1.24
GCDH-202ENST00000421816 CCDC178Q5BJE1 867 aa22.79■■□□□ 1.24
GCDH-202ENST00000421816 POTEEQ6S8J3 1075 aa22.79■■□□□ 1.24
GCDH-202ENST00000421816 LBX2Q6XYB7 198 aa22.79■■□□□ 1.24
GCDH-202ENST00000421816 IQCA1Q86XH1 822 aa22.79■■□□□ 1.24
GCDH-202ENST00000421816 NCOA7Q8NI08 942 aa22.79■■□□□ 1.24
GCDH-202ENST00000421816 TANGO6Q9C0B7 1094 aa22.79■■□□□ 1.24
GCDH-202ENST00000421816 A0A0G2JMZ2 1700 aa22.78■■□□□ 1.24
GCDH-202ENST00000421816 TOP1P11387 765 aaKnown RBP22.78■■□□□ 1.24
GCDH-202ENST00000421816 COG2Q14746 738 aa22.78■■□□□ 1.24
GCDH-202ENST00000421816 CYB5R4Q7L1T6 521 aa22.78■■□□□ 1.24
GCDH-202ENST00000421816 DGKHQ86XP1 1220 aa22.78■■□□□ 1.24
GCDH-202ENST00000421816 GTF3C2Q8WUA4 911 aaPredicted RBP22.78■■□□□ 1.24
GCDH-202ENST00000421816 ANKS1AQ92625 1134 aa22.78■■□□□ 1.24
GCDH-202ENST00000421816 ERO1AQ96HE7 468 aa22.78■■□□□ 1.24
GCDH-202ENST00000421816 ZSCAN10Q96SZ4 725 aaPredicted RBP22.78■■□□□ 1.24
GCDH-202ENST00000421816 TMEM47Q9BQJ4 181 aa22.78■■□□□ 1.24
GCDH-202ENST00000421816 ZKSCAN3Q9BRR0 538 aa22.78■■□□□ 1.24
GCDH-202ENST00000421816 MORF4L1Q9UBU8 362 aa22.78■■□□□ 1.24
GCDH-202ENST00000421816 SPDYE16A6NNV3 312 aaPredicted RBP22.77■■□□□ 1.24
GCDH-202ENST00000421816 EPB41L2O43491 1005 aaKnown RBP22.77■■□□□ 1.24
GCDH-202ENST00000421816 RAD21O60216 631 aa22.77■■□□□ 1.24
GCDH-202ENST00000421816 LACTBP83111 547 aaPredicted RBP22.77■■□□□ 1.24
GCDH-202ENST00000421816 FAM110CQ1W6H9 321 aa22.77■■□□□ 1.24
GCDH-202ENST00000421816 FAM83BQ5T0W9 1011 aa22.77■■□□□ 1.24
GCDH-202ENST00000421816 RNF20Q5VTR2 975 aa22.77■■□□□ 1.24
GCDH-202ENST00000421816 SLFN13Q68D06 897 aa22.77■■□□□ 1.24
GCDH-202ENST00000421816 ANKRD13CQ8N6S4 541 aa22.77■■□□□ 1.24
GCDH-202ENST00000421816 CD99L2Q8TCZ2 262 aa22.77■■□□□ 1.24
GCDH-202ENST00000421816 NUP88Q99567 741 aaPredicted RBP22.77■■□□□ 1.24
GCDH-202ENST00000421816 RBPJLQ9UBG7 517 aa22.77■■□□□ 1.24
GCDH-202ENST00000421816 GTF3C3Q9Y5Q9 886 aa22.77■■□□□ 1.24
GCDH-202ENST00000421816 ZSWIM8A7E2V4 1837 aa22.77■■□□□ 1.24
GCDH-202ENST00000421816 MYPNQ86TC9 1320 aa22.77■■□□□ 1.24
GCDH-202ENST00000421816 MGAMO43451 1857 aa22.77■■□□□ 1.24
GCDH-202ENST00000421816 CAP1Q01518 475 aa22.76■■□□□ 1.23
GCDH-202ENST00000421816 TSGA10IPQ3SY00 556 aa22.76■■□□□ 1.23
GCDH-202ENST00000421816 COL13A1Q5TAT6 717 aaPredicted RBP22.76■■□□□ 1.23
GCDH-202ENST00000421816 RALYLQ86SE5 291 aaKnown RBP22.76■■□□□ 1.23
GCDH-202ENST00000421816 MB21D2Q8IYB1 491 aaPredicted RBP22.76■■□□□ 1.23
GCDH-202ENST00000421816 KCNB2Q92953 911 aa22.76■■□□□ 1.23
GCDH-202ENST00000421816 GMCL1Q96IK5 515 aa22.76■■□□□ 1.23
GCDH-202ENST00000421816 HOXC10Q9NYD6 342 aa22.76■■□□□ 1.23
GCDH-202ENST00000421816 TNKSO95271 1327 aa22.76■■□□□ 1.23
GCDH-202ENST00000421816 FLOT1O75955 427 aa22.75■■□□□ 1.23
GCDH-202ENST00000421816 DSG3P32926 999 aa22.75■■□□□ 1.23
GCDH-202ENST00000421816 ENAHQ8N8S7 591 aaPredicted RBP22.75■■□□□ 1.23
GCDH-202ENST00000421816 TXNRD2Q9NNW7 524 aa22.75■■□□□ 1.23
GCDH-202ENST00000421816 CNMDO75829 334 aa22.74■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms