RNA–Protein interactions for RNA: ENST00000421625.6

USP48-205, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 2 BASIC

Gene USP48, Length 2,818 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-205ENST00000421625 CSF1RP07333 972 aa24.03■■□□□ 1.44
USP48-205ENST00000421625 ACBD3Q9H3P7 528 aa24.03■■□□□ 1.44
USP48-205ENST00000421625 MYO1AQ9UBC5 1043 aa24.03■■□□□ 1.44
USP48-205ENST00000421625 REXO2Q9Y3B8 237 aaKnown RBP24.03■■□□□ 1.44
USP48-205ENST00000421625 MBD4O95243 580 aa24.03■■□□□ 1.44
USP48-205ENST00000421625 AKNAD1Q5T1N1 836 aa24.03■■□□□ 1.44
USP48-205ENST00000421625 PARP4Q9UKK3 1724 aaKnown RBP24.03■■□□□ 1.44
USP48-205ENST00000421625 TRIM75PA6NK02 468 aa24.02■■□□□ 1.44
USP48-205ENST00000421625 WTAPQ15007 396 aa24.02■■□□□ 1.44
USP48-205ENST00000421625 CCDC148Q8NFR7 591 aa24.02■■□□□ 1.44
USP48-205ENST00000421625 GSDMAQ96QA5 445 aa24.02■■□□□ 1.44
USP48-205ENST00000421625 ARMT1Q9H993 441 aa24.02■■□□□ 1.44
USP48-205ENST00000421625 TFR2Q9UP52 801 aa24.02■■□□□ 1.44
USP48-205ENST00000421625 NID2Q14112 1375 aa24.02■■□□□ 1.44
USP48-205ENST00000421625 SOS2Q07890 1332 aaPredicted RBP24.02■■□□□ 1.44
USP48-205ENST00000421625 PATL2C9JE40 543 aaKnown RBP24.02■■□□□ 1.44
USP48-205ENST00000421625 ALX1Q15699 326 aa24.02■■□□□ 1.44
USP48-205ENST00000421625 TTLL11Q8NHH1 800 aa24.02■■□□□ 1.44
USP48-205ENST00000421625 RIN2Q8WYP3 895 aaPredicted RBP24.02■■□□□ 1.44
USP48-205ENST00000421625 GDAP1L1Q96MZ0 367 aa24.02■■□□□ 1.44
USP48-205ENST00000421625 BLZF1Q9H2G9 400 aa24.02■■□□□ 1.44
USP48-205ENST00000421625 GREM2Q9H772 168 aa24.02■■□□□ 1.44
USP48-205ENST00000421625 CHD4Q14839 1912 aa24.02■■□□□ 1.44
USP48-205ENST00000421625 COL18A1P39060 1754 aa24.02■■□□□ 1.44
USP48-205ENST00000421625 KRT9P35527 623 aa24.02■■□□□ 1.43
USP48-205ENST00000421625 TTC31Q49AM3 519 aaPredicted RBP24.02■■□□□ 1.43
USP48-205ENST00000421625 MFSD6Q6ZSS7 791 aa24.02■■□□□ 1.43
USP48-205ENST00000421625 PRKAB2O43741 272 aa24.01■■□□□ 1.43
USP48-205ENST00000421625 PRPF6O94906 941 aaKnown RBP24.01■■□□□ 1.43
USP48-205ENST00000421625 TUBBP07437 444 aa24.01■■□□□ 1.43
USP48-205ENST00000421625 ITGA6P23229 1130 aa24.01■■□□□ 1.43
USP48-205ENST00000421625 AFAP1L1Q8TED9 768 aa24.01■■□□□ 1.43
USP48-205ENST00000421625 CNNM1Q9NRU3 951 aa24.01■■□□□ 1.43
USP48-205ENST00000421625 VPS54Q9P1Q0 977 aa24.01■■□□□ 1.43
USP48-205ENST00000421625 LIMA1Q9UHB6 759 aaKnown RBP24.01■■□□□ 1.43
USP48-205ENST00000421625 SRGAP2O75044 1071 aa24.01■■□□□ 1.43
USP48-205ENST00000421625 PCCAP05165 728 aaPredicted RBP24.01■■□□□ 1.43
USP48-205ENST00000421625 COPB1P53618 953 aaKnown RBP24.01■■□□□ 1.43
USP48-205ENST00000421625 USP14P54578 494 aa24.01■■□□□ 1.43
USP48-205ENST00000421625 CORO7P57737 925 aa24.01■■□□□ 1.43
USP48-205ENST00000421625 SKIDA1Q1XH10 827 aa24.01■■□□□ 1.43
USP48-205ENST00000421625 TRAPPC11Q7Z392 1133 aa24.01■■□□□ 1.43
USP48-205ENST00000421625 MMS19Q96T76 1030 aa24.01■■□□□ 1.43
USP48-205ENST00000421625 hCG_1642624A0A1W2PR95 340 aa24■■□□□ 1.43
USP48-205ENST00000421625 HPCAL4Q9UM19 191 aa24■■□□□ 1.43
USP48-205ENST00000421625 AARSP49588 968 aaKnown RBP eCLIP24■■□□□ 1.43
USP48-205ENST00000421625 KRT23Q9C075 422 aa24■■□□□ 1.43
USP48-205ENST00000421625 CNNM2Q9H8M5 875 aa24■■□□□ 1.43
USP48-205ENST00000421625 BCL9LQ86UU0 1499 aa23.99■■□□□ 1.43
USP48-205ENST00000421625 ZMYND10O75800 440 aa23.99■■□□□ 1.43
USP48-205ENST00000421625 RRAGBQ5VZM2 374 aa23.99■■□□□ 1.43
USP48-205ENST00000421625 MAGEB6Q8N7X4 407 aa23.99■■□□□ 1.43
USP48-205ENST00000421625 VGLL2Q8N8G2 317 aa23.99■■□□□ 1.43
USP48-205ENST00000421625 FANCBQ8NB91 859 aa23.99■■□□□ 1.43
USP48-205ENST00000421625 ZNF512BQ96KM6 892 aaPredicted RBP23.99■■□□□ 1.43
USP48-205ENST00000421625 KCPQ6ZWJ8 1503 aa23.99■■□□□ 1.43
USP48-205ENST00000421625 ATP1A1P05023 1023 aaKnown RBP23.99■■□□□ 1.43
USP48-205ENST00000421625 VIPAS39Q9H9C1 493 aa23.99■■□□□ 1.43
USP48-205ENST00000421625 EPN1Q9Y6I3 576 aaPredicted RBP23.99■■□□□ 1.43
USP48-205ENST00000421625 XDHP47989 1333 aa23.99■■□□□ 1.43
USP48-205ENST00000421625 ZC3H4Q9UPT8 1303 aaKnown RBP23.99■■□□□ 1.43
USP48-205ENST00000421625 GSG1L2A8MUP6 293 aa23.98■■□□□ 1.43
USP48-205ENST00000421625 PRDM1O75626 825 aa23.98■■□□□ 1.43
USP48-205ENST00000421625 NDUFA10O95299 355 aa23.98■■□□□ 1.43
USP48-205ENST00000421625 GSPT2Q8IYD1 628 aaKnown RBP23.98■■□□□ 1.43
USP48-205ENST00000421625 ZNF654Q8IZM8 581 aa23.98■■□□□ 1.43
USP48-205ENST00000421625 PLA2G12BQ9BX93 195 aa23.98■■□□□ 1.43
USP48-205ENST00000421625 PPFIA4O75335 1185 aa23.98■■□□□ 1.43
USP48-205ENST00000421625 ICE2Q659A1 982 aa23.98■■□□□ 1.43
USP48-205ENST00000421625 CTR9Q6PD62 1173 aa23.98■■□□□ 1.43
USP48-205ENST00000421625 ZBTB38Q8NAP3 1195 aaPredicted RBP23.98■■□□□ 1.43
USP48-205ENST00000421625 CAPZA3Q96KX2 299 aa23.98■■□□□ 1.43
USP48-205ENST00000421625 LRRC10BA6NIK2 292 aa23.97■■□□□ 1.43
USP48-205ENST00000421625 ZNF174Q15697 407 aa23.97■■□□□ 1.43
USP48-205ENST00000421625 SART3Q15020 963 aaKnown RBP23.97■■□□□ 1.43
USP48-205ENST00000421625 TCP11X2Q5H9J9 407 aa23.97■■□□□ 1.43
USP48-205ENST00000421625 KCNJ18B7U540 433 aa23.97■■□□□ 1.43
USP48-205ENST00000421625 KCNJ12Q14500 433 aa23.97■■□□□ 1.43
USP48-205ENST00000421625 MAPK8IP1Q9UQF2 711 aa23.97■■□□□ 1.43
USP48-205ENST00000421625 UBR2Q8IWV8 1755 aa23.96■■□□□ 1.43
USP48-205ENST00000421625 ARID4AP29374 1257 aaPredicted RBP23.96■■□□□ 1.43
USP48-205ENST00000421625 PPP1R3FQ6ZSY5 799 aaPredicted RBP23.96■■□□□ 1.43
USP48-205ENST00000421625 HELBQ8NG08 1087 aaPredicted RBP23.96■■□□□ 1.43
USP48-205ENST00000421625 CTCFLQ8NI51 663 aaPredicted RBP23.96■■□□□ 1.43
USP48-205ENST00000421625 CCDC196A0A1B0GTZ2 297 aa23.96■■□□□ 1.43
USP48-205ENST00000421625 ERICH2A1L162 156 aa23.96■■□□□ 1.43
USP48-205ENST00000421625 PSMD14O00487 310 aa23.96■■□□□ 1.43
USP48-205ENST00000421625 TDO2P48775 406 aa23.96■■□□□ 1.43
USP48-205ENST00000421625 GTF2A1P52655 376 aaPredicted RBP23.96■■□□□ 1.43
USP48-205ENST00000421625 MYH6P13533 1939 aa23.95■■□□□ 1.43
USP48-205ENST00000421625 MYBL2P10244 700 aa23.95■■□□□ 1.42
USP48-205ENST00000421625 GPTP24298 496 aa23.95■■□□□ 1.42
USP48-205ENST00000421625 UBXN1Q04323 297 aa23.95■■□□□ 1.42
USP48-205ENST00000421625 STAG1Q8WVM7 1258 aa23.95■■□□□ 1.42
USP48-205ENST00000421625 PDE8BO95263 885 aa23.95■■□□□ 1.42
USP48-205ENST00000421625 GGCXP38435 758 aa23.95■■□□□ 1.42
USP48-205ENST00000421625 HERVK_113P62684 666 aa23.95■■□□□ 1.42
USP48-205ENST00000421625 PAK1Q13153 545 aa23.95■■□□□ 1.42
USP48-205ENST00000421625 STIM1Q13586 685 aa23.95■■□□□ 1.42
USP48-205ENST00000421625 TRIM14Q14142 442 aa23.95■■□□□ 1.42
Retrieved 100 of 20,778 RNA–protein pairs in 65.4 ms