RNA–Protein interactions for RNA: ENST00000420973.5

CHRD-204, Transcript of chordin, humanhuman

TSL 1 (best)

Gene CHRD, Length 3,492 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRD-204ENST00000420973 ZNF75DP51815 510 aa16.4■□□□□ 0.22
CHRD-204ENST00000420973 MRPS27Q92552 414 aaKnown RBP16.4■□□□□ 0.22
CHRD-204ENST00000420973 MIEF2Q96C03 454 aa16.4■□□□□ 0.22
CHRD-204ENST00000420973 MXD3Q9BW11 206 aa16.4■□□□□ 0.22
CHRD-204ENST00000420973 RNF41Q9H4P4 317 aaPredicted RBP16.4■□□□□ 0.22
CHRD-204ENST00000420973 DNAI1Q9UI46 699 aa16.4■□□□□ 0.22
CHRD-204ENST00000420973 SASH3O75995 380 aa16.4■□□□□ 0.22
CHRD-204ENST00000420973 GOLGA8HP0CJ92 632 aa16.4■□□□□ 0.22
CHRD-204ENST00000420973 CCDC144BQ3MJ40 725 aa16.4■□□□□ 0.22
CHRD-204ENST00000420973 CATIPQ7Z7H3 387 aa16.4■□□□□ 0.22
CHRD-204ENST00000420973 STAMQ92783 540 aa16.4■□□□□ 0.22
CHRD-204ENST00000420973 TRIM6Q9C030 488 aaPredicted RBP16.4■□□□□ 0.22
CHRD-204ENST00000420973 TAF1P21675 1872 aa16.4■□□□□ 0.22
CHRD-204ENST00000420973 PLEKHA8P1O95397 391 aa16.4■□□□□ 0.22
CHRD-204ENST00000420973 SCNN1DP51172 638 aa16.4■□□□□ 0.22
CHRD-204ENST00000420973 OTUD6BQ8N6M0 293 aa16.4■□□□□ 0.22
CHRD-204ENST00000420973 TRPC5Q9UL62 973 aaPredicted RBP16.4■□□□□ 0.22
CHRD-204ENST00000420973 FAM205CA6NFA0 338 aa16.39■□□□□ 0.21
CHRD-204ENST00000420973 GCKP35557 465 aa16.39■□□□□ 0.21
CHRD-204ENST00000420973 GTF2IP78347 998 aa16.39■□□□□ 0.21
CHRD-204ENST00000420973 JAKMIP3Q5VZ66 844 aa16.39■□□□□ 0.21
CHRD-204ENST00000420973 ANO1Q5XXA6 986 aa16.39■□□□□ 0.21
CHRD-204ENST00000420973 AOPEPQ8N6M6 819 aa16.39■□□□□ 0.21
CHRD-204ENST00000420973 IGDCC4Q8TDY8 1250 aa16.39■□□□□ 0.21
CHRD-204ENST00000420973 CNNM2Q9H8M5 875 aa16.39■□□□□ 0.21
CHRD-204ENST00000420973 ITGB4P16144 1822 aa16.39■□□□□ 0.21
CHRD-204ENST00000420973 ELF1P32519 619 aa16.39■□□□□ 0.21
CHRD-204ENST00000420973 C11orf57Q6ZUT1 292 aaPredicted RBP16.39■□□□□ 0.21
CHRD-204ENST00000420973 TMEM87AQ8NBN3 555 aa16.39■□□□□ 0.21
CHRD-204ENST00000420973 OXER1Q8TDS5 423 aa16.39■□□□□ 0.21
CHRD-204ENST00000420973 TMEM87BQ96K49 555 aa16.39■□□□□ 0.21
CHRD-204ENST00000420973 CARD6Q9BX69 1037 aa16.39■□□□□ 0.21
CHRD-204ENST00000420973 MYH14Q7Z406 1995 aaKnown RBP16.39■□□□□ 0.21
CHRD-204ENST00000420973 ADAMTS7Q9UKP4 1686 aa16.39■□□□□ 0.21
CHRD-204ENST00000420973 RFX7Q2KHR2 1363 aa16.39■□□□□ 0.21
CHRD-204ENST00000420973 EVCP57679 992 aa16.39■□□□□ 0.21
CHRD-204ENST00000420973 NEDD9Q14511 834 aa16.39■□□□□ 0.21
CHRD-204ENST00000420973 ILDR1Q86SU0 546 aaPredicted RBP16.39■□□□□ 0.21
CHRD-204ENST00000420973 CLSTN2Q9H4D0 955 aa16.39■□□□□ 0.21
CHRD-204ENST00000420973 ZMYM6O95789 1325 aa16.39■□□□□ 0.21
CHRD-204ENST00000420973 PHLPP1O60346 1717 aa16.38■□□□□ 0.21
CHRD-204ENST00000420973 KIF23Q02241 960 aaPredicted RBP16.38■□□□□ 0.21
CHRD-204ENST00000420973 LRRC8AQ8IWT6 810 aa16.38■□□□□ 0.21
CHRD-204ENST00000420973 THOC1Q96FV9 657 aaKnown RBP16.38■□□□□ 0.21
CHRD-204ENST00000420973 CRYBG1Q9Y4K1 1723 aa16.38■□□□□ 0.21
CHRD-204ENST00000420973 KLHL33A6NCF5 533 aa16.38■□□□□ 0.21
CHRD-204ENST00000420973 ZRANB2O95218 330 aaKnown RBP eCLIP16.38■□□□□ 0.21
CHRD-204ENST00000420973 SF3B3Q15393 1217 aaKnown RBP16.38■□□□□ 0.21
CHRD-204ENST00000420973 PRR5LQ6MZQ0 368 aa16.38■□□□□ 0.21
CHRD-204ENST00000420973 KRT27Q7Z3Y8 459 aa16.38■□□□□ 0.21
CHRD-204ENST00000420973 FANCBQ8NB91 859 aa16.38■□□□□ 0.21
CHRD-204ENST00000420973 TMX4Q9H1E5 349 aaPredicted RBP16.38■□□□□ 0.21
CHRD-204ENST00000420973 RABEP2Q9H5N1 569 aa16.38■□□□□ 0.21
CHRD-204ENST00000420973 MKRN1Q9UHC7 482 aaKnown RBP16.38■□□□□ 0.21
CHRD-204ENST00000420973 USP17L3A6NCW0 530 aa16.38■□□□□ 0.21
CHRD-204ENST00000420973 USP17L4A6NCW7 530 aa16.38■□□□□ 0.21
CHRD-204ENST00000420973 SLURP2P0DP57 97 aa16.38■□□□□ 0.21
CHRD-204ENST00000420973 GNAT2P19087 354 aa16.38■□□□□ 0.21
CHRD-204ENST00000420973 TFAP4Q01664 338 aa16.38■□□□□ 0.21
CHRD-204ENST00000420973 MFSD14BQ5SR56 506 aa16.38■□□□□ 0.21
CHRD-204ENST00000420973 RASGRP2Q7LDG7 609 aa16.38■□□□□ 0.21
CHRD-204ENST00000420973 USP17L1Q7RTZ2 530 aa16.38■□□□□ 0.21
CHRD-204ENST00000420973 AMOTL1Q8IY63 956 aa16.38■□□□□ 0.21
CHRD-204ENST00000420973 ITFG2Q969R8 447 aa16.38■□□□□ 0.21
CHRD-204ENST00000420973 NAP1L1P55209 391 aaKnown RBP16.37■□□□□ 0.21
CHRD-204ENST00000420973 ANKRD2Q9GZV1 360 aa16.37■□□□□ 0.21
CHRD-204ENST00000420973 ACBD3Q9H3P7 528 aa16.37■□□□□ 0.21
CHRD-204ENST00000420973 ZSWIM4Q9H7M6 989 aa16.37■□□□□ 0.21
CHRD-204ENST00000420973 KLHL10Q6JEL2 608 aa16.37■□□□□ 0.21
CHRD-204ENST00000420973 SH3RF3Q8TEJ3 882 aaPredicted RBP16.37■□□□□ 0.21
CHRD-204ENST00000420973 PDE11AQ9HCR9 933 aa16.37■□□□□ 0.21
CHRD-204ENST00000420973 DOT1LQ8TEK3 1739 aa16.37■□□□□ 0.21
CHRD-204ENST00000420973 NRDCO43847 1150 aa16.36■□□□□ 0.21
CHRD-204ENST00000420973 TBC1D8O95759 1140 aa16.36■□□□□ 0.21
CHRD-204ENST00000420973 SLC3A2P08195 630 aaKnown RBP16.36■□□□□ 0.21
CHRD-204ENST00000420973 IRX1P78414 480 aaPredicted RBP16.36■□□□□ 0.21
CHRD-204ENST00000420973 ZNF444Q8N0Y2 327 aaPredicted RBP16.36■□□□□ 0.21
CHRD-204ENST00000420973 TBC1D22AQ8WUA7 517 aa16.36■□□□□ 0.21
CHRD-204ENST00000420973 GPKOWQ92917 476 aaPredicted RBP eCLIP16.36■□□□□ 0.21
CHRD-204ENST00000420973 SKAP2O75563 359 aaPredicted RBP16.36■□□□□ 0.21
CHRD-204ENST00000420973 LMOD1P29536 600 aaPredicted RBP16.36■□□□□ 0.21
CHRD-204ENST00000420973 SYKP43405 635 aa16.36■□□□□ 0.21
CHRD-204ENST00000420973 AFMP43652 599 aa16.36■□□□□ 0.21
CHRD-204ENST00000420973 ZNF174Q15697 407 aa16.36■□□□□ 0.21
CHRD-204ENST00000420973 ZNF827Q17R98 1081 aa16.36■□□□□ 0.21
CHRD-204ENST00000420973 CEP57Q86XR8 500 aa16.36■□□□□ 0.21
CHRD-204ENST00000420973 ZSCAN29Q8IWY8 852 aaPredicted RBP16.36■□□□□ 0.21
CHRD-204ENST00000420973 RASGRP4Q8TDF6 673 aa16.36■□□□□ 0.21
CHRD-204ENST00000420973 NSUN4Q96CB9 384 aaKnown RBP16.36■□□□□ 0.21
CHRD-204ENST00000420973 PLIN2Q99541 437 aa16.36■□□□□ 0.21
CHRD-204ENST00000420973 GLI3P10071 1580 aa16.36■□□□□ 0.21
CHRD-204ENST00000420973 BCL9LQ86UU0 1499 aa16.36■□□□□ 0.21
CHRD-204ENST00000420973 COL14A1Q05707 1796 aaKnown RBP16.36■□□□□ 0.21
CHRD-204ENST00000420973 CLNS1AP54105 237 aaKnown RBP16.36■□□□□ 0.21
CHRD-204ENST00000420973 GPSM2P81274 684 aa16.36■□□□□ 0.21
CHRD-204ENST00000420973 NAA25Q14CX7 972 aa16.36■□□□□ 0.21
CHRD-204ENST00000420973 GRAMD1CQ8IYS0 662 aa16.36■□□□□ 0.21
CHRD-204ENST00000420973 KIRREL3Q8IZU9 778 aa16.36■□□□□ 0.21
CHRD-204ENST00000420973 ENAHQ8N8S7 591 aaPredicted RBP16.36■□□□□ 0.21
CHRD-204ENST00000420973 CERKQ8TCT0 537 aa16.36■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms