RNA–Protein interactions for RNA: ENST00000420588.5

SCAP-205, Transcript of SREBF chaperone, humanhuman

TSL 4

Gene SCAP, Length 546 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAP-205ENST00000420588 HSPA1BP0DMV9 641 aaKnown RBP16.26■□□□□ 0.19
SCAP-205ENST00000420588 IRX3P78415 501 aaPredicted RBP16.26■□□□□ 0.19
SCAP-205ENST00000420588 SART3Q15020 963 aaKnown RBP16.26■□□□□ 0.19
SCAP-205ENST00000420588 TREML2Q5T2D2 321 aa16.26■□□□□ 0.19
SCAP-205ENST00000420588 CYB5R4Q7L1T6 521 aa16.26■□□□□ 0.19
SCAP-205ENST00000420588 SPICE1Q8N0Z3 855 aa16.26■□□□□ 0.19
SCAP-205ENST00000420588 LRRC47Q8N1G4 583 aaKnown RBP16.26■□□□□ 0.19
SCAP-205ENST00000420588 LPAR1Q92633 364 aa16.26■□□□□ 0.19
SCAP-205ENST00000420588 C12orf42Q96LP6 360 aa16.26■□□□□ 0.19
SCAP-205ENST00000420588 SAGE1Q9NXZ1 904 aa16.26■□□□□ 0.19
SCAP-205ENST00000420588 PNMA3Q9UL41 463 aa16.26■□□□□ 0.19
SCAP-205ENST00000420588 ISY1Q9ULR0 285 aaKnown RBP16.26■□□□□ 0.19
SCAP-205ENST00000420588 SLC45A1Q9Y2W3 748 aa16.26■□□□□ 0.19
SCAP-205ENST00000420588 LAMA4Q16363 1823 aa16.26■□□□□ 0.19
SCAP-205ENST00000420588 USP17L15C9J2P7 530 aa16.25■□□□□ 0.19
SCAP-205ENST00000420588 USP17L13C9JLJ4 530 aa16.25■□□□□ 0.19
SCAP-205ENST00000420588 USP17L11C9JVI0 530 aa16.25■□□□□ 0.19
SCAP-205ENST00000420588 USP17L18D6R9N7 530 aa16.25■□□□□ 0.19
SCAP-205ENST00000420588 USP17L22D6RA61 530 aa16.25■□□□□ 0.19
SCAP-205ENST00000420588 USP17L17D6RBQ6 530 aa16.25■□□□□ 0.19
SCAP-205ENST00000420588 USP17L19D6RCP7 530 aa16.25■□□□□ 0.19
SCAP-205ENST00000420588 USP17L20D6RJB6 530 aa16.25■□□□□ 0.19
SCAP-205ENST00000420588 F5H6K3 240 aa16.25■□□□□ 0.19
SCAP-205ENST00000420588 IFIT3O14879 490 aaKnown RBP16.25■□□□□ 0.19
SCAP-205ENST00000420588 TOP1P11387 765 aaKnown RBP16.25■□□□□ 0.19
SCAP-205ENST00000420588 VCAM1P19320 739 aa16.25■□□□□ 0.19
SCAP-205ENST00000420588 MCM5P33992 734 aa16.25■□□□□ 0.19
SCAP-205ENST00000420588 KLRC3Q07444 240 aa16.25■□□□□ 0.19
SCAP-205ENST00000420588 USP17L24Q0WX57 530 aa16.25■□□□□ 0.19
SCAP-205ENST00000420588 TSGA10IPQ3SY00 556 aa16.25■□□□□ 0.19
SCAP-205ENST00000420588 CHST3Q7LGC8 479 aa16.25■□□□□ 0.19
SCAP-205ENST00000420588 DGKHQ86XP1 1220 aa16.25■□□□□ 0.19
SCAP-205ENST00000420588 RASEFQ8IZ41 740 aa16.25■□□□□ 0.19
SCAP-205ENST00000420588 NKX2-3Q8TAU0 364 aa16.25■□□□□ 0.19
SCAP-205ENST00000420588 NEK1Q96PY6 1258 aa16.25■□□□□ 0.19
SCAP-205ENST00000420588 PARK7Q99497 189 aaKnown RBP16.25■□□□□ 0.19
SCAP-205ENST00000420588 RPAP3Q9H6T3 665 aaPredicted RBP16.25■□□□□ 0.19
SCAP-205ENST00000420588 SYNPO2Q9UMS6 1093 aa16.25■□□□□ 0.19
SCAP-205ENST00000420588 MTMR7Q9Y216 660 aa16.25■□□□□ 0.19
SCAP-205ENST00000420588 TNKSO95271 1327 aa16.24■□□□□ 0.19
SCAP-205ENST00000420588 THSD7BQ9C0I4 1608 aa16.24■□□□□ 0.19
SCAP-205ENST00000420588 HOXA7P31268 230 aaPredicted RBP16.24■□□□□ 0.19
SCAP-205ENST00000420588 C8orf34Q49A92 452 aa16.24■□□□□ 0.19
SCAP-205ENST00000420588 SLFN13Q68D06 897 aa16.24■□□□□ 0.19
SCAP-205ENST00000420588 SMCR8Q8TEV9 937 aaPredicted RBP16.24■□□□□ 0.19
SCAP-205ENST00000420588 CHMP4CQ96CF2 233 aa16.24■□□□□ 0.19
SCAP-205ENST00000420588 TMEM47Q9BQJ4 181 aa16.24■□□□□ 0.19
SCAP-205ENST00000420588 TANGO6Q9C0B7 1094 aa16.24■□□□□ 0.19
SCAP-205ENST00000420588 KAT14Q9H8E8 782 aa16.24■□□□□ 0.19
SCAP-205ENST00000420588 SNX14Q9Y5W7 946 aa16.24■□□□□ 0.19
SCAP-205ENST00000420588 WDR46O15213 610 aaKnown RBP16.23■□□□□ 0.19
SCAP-205ENST00000420588 PRC1O43663 620 aa16.23■□□□□ 0.19
SCAP-205ENST00000420588 SEC24BO95487 1268 aa16.23■□□□□ 0.19
SCAP-205ENST00000420588 NDUFB10O96000 172 aa16.23■□□□□ 0.19
SCAP-205ENST00000420588 HMGB1P09429 215 aaKnown RBP16.23■□□□□ 0.19
SCAP-205ENST00000420588 CYP2C8P10632 490 aa16.23■□□□□ 0.19
SCAP-205ENST00000420588 PSMA5P28066 241 aa16.23■□□□□ 0.19
SCAP-205ENST00000420588 CRHR2Q13324 411 aa16.23■□□□□ 0.19
SCAP-205ENST00000420588 KIAA1755Q5JYT7 1200 aa16.23■□□□□ 0.19
SCAP-205ENST00000420588 IFIT1BQ5T764 474 aaKnown RBP16.23■□□□□ 0.19
SCAP-205ENST00000420588 SAMD1Q6SPF0 538 aaPredicted RBP16.23■□□□□ 0.19
SCAP-205ENST00000420588 CATSPERGQ6ZRH7 1159 aa16.23■□□□□ 0.19
SCAP-205ENST00000420588 MB21D2Q8IYB1 491 aaPredicted RBP16.23■□□□□ 0.19
SCAP-205ENST00000420588 GMCL1P1Q8NEA9 526 aa16.23■□□□□ 0.19
SCAP-205ENST00000420588 KCNB2Q92953 911 aa16.23■□□□□ 0.19
SCAP-205ENST00000420588 JAKMIP1Q96N16 626 aaKnown RBP16.23■□□□□ 0.19
SCAP-205ENST00000420588 ASCC2Q9H1I8 757 aaPredicted RBP16.23■□□□□ 0.19
SCAP-205ENST00000420588 TSKSQ9UJT2 592 aa16.23■□□□□ 0.19
SCAP-205ENST00000420588 FOXN1O15353 648 aa16.22■□□□□ 0.19
SCAP-205ENST00000420588 SLC1A4P43007 532 aa16.22■□□□□ 0.19
SCAP-205ENST00000420588 NOVP48745 357 aa16.22■□□□□ 0.19
SCAP-205ENST00000420588 WTAPQ15007 396 aa16.22■□□□□ 0.19
SCAP-205ENST00000420588 ADCK5Q3MIX3 580 aa16.22■□□□□ 0.19
SCAP-205ENST00000420588 TMEM67Q5HYA8 995 aa16.22■□□□□ 0.19
SCAP-205ENST00000420588 FAM83BQ5T0W9 1011 aa16.22■□□□□ 0.19
SCAP-205ENST00000420588 RCSD1Q6JBY9 416 aa16.22■□□□□ 0.19
SCAP-205ENST00000420588 ENAHQ8N8S7 591 aaPredicted RBP16.22■□□□□ 0.19
SCAP-205ENST00000420588 ANKS1AQ92625 1134 aa16.22■□□□□ 0.19
SCAP-205ENST00000420588 P2RX7Q99572 595 aaKnown RBP16.22■□□□□ 0.19
SCAP-205ENST00000420588 GREB1LQ9C091 1923 aaPredicted RBP16.21■□□□□ 0.19
SCAP-205ENST00000420588 CEP350Q5VT06 3117 aa16.21■□□□□ 0.19
SCAP-205ENST00000420588 FLOT1O75955 427 aa16.21■□□□□ 0.19
SCAP-205ENST00000420588 CTCFP49711 727 aaPredicted RBP16.21■□□□□ 0.19
SCAP-205ENST00000420588 FGD1P98174 961 aa16.21■□□□□ 0.19
SCAP-205ENST00000420588 COG2Q14746 738 aa16.21■□□□□ 0.19
SCAP-205ENST00000420588 CCDC96Q2M329 555 aa16.21■□□□□ 0.19
SCAP-205ENST00000420588 BLOC1S2Q6QNY1 142 aa16.21■□□□□ 0.19
SCAP-205ENST00000420588 DHX32Q7L7V1 743 aaKnown RBP16.21■□□□□ 0.19
SCAP-205ENST00000420588 TMEM87BQ96K49 555 aa16.21■□□□□ 0.19
SCAP-205ENST00000420588 NUP88Q99567 741 aaPredicted RBP16.21■□□□□ 0.19
SCAP-205ENST00000420588 CFHR5Q9BXR6 569 aa16.21■□□□□ 0.19
SCAP-205ENST00000420588 UPF2Q9HAU5 1272 aaKnown RBP16.21■□□□□ 0.19
SCAP-205ENST00000420588 HOXC10Q9NYD6 342 aa16.21■□□□□ 0.19
SCAP-205ENST00000420588 PTPRFP10586 1907 aa16.21■□□□□ 0.19
SCAP-205ENST00000420588 TLR2O60603 784 aa16.2■□□□□ 0.18
SCAP-205ENST00000420588 BMP3P12645 472 aa16.2■□□□□ 0.18
SCAP-205ENST00000420588 GCLCP48506 637 aaPredicted RBP16.2■□□□□ 0.18
SCAP-205ENST00000420588 ANTXR2P58335 489 aa16.2■□□□□ 0.18
SCAP-205ENST00000420588 IKQ13123 557 aaPredicted RBP16.2■□□□□ 0.18
SCAP-205ENST00000420588 NFXL1Q6ZNB6 911 aa16.2■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms