RNA–Protein interactions for RNA: ENST00000420138.5

GPC1-202, Transcript of glypican 1, humanhuman

TSL 5 BASIC

Gene GPC1, Length 1,835 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-202ENST00000420138 EIF6P56537 245 aaKnown RBP24.25■■□□□ 1.47
GPC1-202ENST00000420138 ZNF70Q9UC06 446 aaPredicted RBP24.25■■□□□ 1.47
GPC1-202ENST00000420138 MYH15Q9Y2K3 1946 aa24.25■■□□□ 1.47
GPC1-202ENST00000420138 LMNB1P20700 586 aa24.24■■□□□ 1.47
GPC1-202ENST00000420138 AKAP17AQ02040 695 aaKnown RBP24.24■■□□□ 1.47
GPC1-202ENST00000420138 TATDN1Q6P1N9 297 aa24.24■■□□□ 1.47
GPC1-202ENST00000420138 CLEC10AQ8IUN9 316 aa24.24■■□□□ 1.47
GPC1-202ENST00000420138 BTBD18B2RXH4 712 aa24.24■■□□□ 1.47
GPC1-202ENST00000420138 FZD9O00144 591 aa24.24■■□□□ 1.47
GPC1-202ENST00000420138 VEGFAP15692 232 aaPredicted RBP24.24■■□□□ 1.47
GPC1-202ENST00000420138 YBX3P16989 372 aaKnown RBP eCLIP24.24■■□□□ 1.47
GPC1-202ENST00000420138 SPDYE2Q495Y8 402 aa24.24■■□□□ 1.47
GPC1-202ENST00000420138 TPRNQ4KMQ1 711 aa24.24■■□□□ 1.47
GPC1-202ENST00000420138 FOXP4Q8IVH2 680 aaPredicted RBP24.24■■□□□ 1.47
GPC1-202ENST00000420138 ZSCAN29Q8IWY8 852 aaPredicted RBP24.24■■□□□ 1.47
GPC1-202ENST00000420138 VPS54Q9P1Q0 977 aa24.24■■□□□ 1.47
GPC1-202ENST00000420138 CLRN2A0PK11 232 aa24.23■■□□□ 1.47
GPC1-202ENST00000420138 CYTH3O43739 400 aa24.23■■□□□ 1.47
GPC1-202ENST00000420138 DIS3L2Q8IYB7 885 aaKnown RBP24.23■■□□□ 1.47
GPC1-202ENST00000420138 PHF20Q9BVI0 1012 aa24.23■■□□□ 1.47
GPC1-202ENST00000420138 POLR3EQ9NVU0 708 aa24.23■■□□□ 1.47
GPC1-202ENST00000420138 CLIC4Q9Y696 253 aa24.23■■□□□ 1.47
GPC1-202ENST00000420138 MYH8P13535 1937 aa24.22■■□□□ 1.47
GPC1-202ENST00000420138 CNTNAP1P78357 1384 aa24.22■■□□□ 1.47
GPC1-202ENST00000420138 SHTN1A0MZ66 631 aa24.22■■□□□ 1.47
GPC1-202ENST00000420138 NASPP49321 788 aaPredicted RBP24.22■■□□□ 1.47
GPC1-202ENST00000420138 LINC00301Q8NCQ3 95 aa24.22■■□□□ 1.47
GPC1-202ENST00000420138 CCDC17Q96LX7 622 aa24.22■■□□□ 1.47
GPC1-202ENST00000420138 GREB1LQ9C091 1923 aaPredicted RBP24.22■■□□□ 1.47
GPC1-202ENST00000420138 GNAQP50148 359 aa24.21■■□□□ 1.47
GPC1-202ENST00000420138 NPY5RQ15761 445 aa24.21■■□□□ 1.47
GPC1-202ENST00000420138 PFKFB3Q16875 520 aaPredicted RBP24.21■■□□□ 1.47
GPC1-202ENST00000420138 SHROOM1Q2M3G4 852 aaPredicted RBP24.21■■□□□ 1.47
GPC1-202ENST00000420138 FOXP1Q9H334 677 aaPredicted RBP24.21■■□□□ 1.47
GPC1-202ENST00000420138 TCP10L2B9ZVM9 353 aa24.21■■□□□ 1.47
GPC1-202ENST00000420138 NOSTRINQ8IVI9 506 aa24.21■■□□□ 1.47
GPC1-202ENST00000420138 OXER1Q8TDS5 423 aa24.21■■□□□ 1.47
GPC1-202ENST00000420138 MTMR7Q9Y216 660 aa24.21■■□□□ 1.47
GPC1-202ENST00000420138 GJA3Q9Y6H8 435 aa24.21■■□□□ 1.47
GPC1-202ENST00000420138 TTLL1O95922 423 aa24.2■■□□□ 1.46
GPC1-202ENST00000420138 GOLGA8HP0CJ92 632 aa24.2■■□□□ 1.46
GPC1-202ENST00000420138 SCG2P13521 617 aa24.2■■□□□ 1.46
GPC1-202ENST00000420138 LIG1P18858 919 aa24.2■■□□□ 1.46
GPC1-202ENST00000420138 USP17L2Q6R6M4 530 aa24.2■■□□□ 1.46
GPC1-202ENST00000420138 YEATS4O95619 227 aa24.19■■□□□ 1.46
GPC1-202ENST00000420138 SNHG28P0DPA3 235 aa24.19■■□□□ 1.46
GPC1-202ENST00000420138 PDHBP11177 359 aa24.19■■□□□ 1.46
GPC1-202ENST00000420138 RPS12P25398 132 aaKnown RBP24.19■■□□□ 1.46
GPC1-202ENST00000420138 ZNF280AP59817 542 aaPredicted RBP24.19■■□□□ 1.46
GPC1-202ENST00000420138 NR5A1Q13285 461 aa24.19■■□□□ 1.46
GPC1-202ENST00000420138 FKBP1CQ5VVH2 108 aa24.19■■□□□ 1.46
GPC1-202ENST00000420138 FAM151AQ8WW52 585 aa24.19■■□□□ 1.46
GPC1-202ENST00000420138 TMOD2Q9NZR1 351 aa24.19■■□□□ 1.46
GPC1-202ENST00000420138 CLIP2Q9UDT6 1046 aa24.19■■□□□ 1.46
GPC1-202ENST00000420138 USP17L5A8MUK1 530 aa24.19■■□□□ 1.46
GPC1-202ENST00000420138 WNT10BO00744 389 aa24.19■■□□□ 1.46
GPC1-202ENST00000420138 SAFBQ15424 915 aaKnown RBP eCLIP24.19■■□□□ 1.46
GPC1-202ENST00000420138 CERKLQ49MI3 558 aaPredicted RBP24.19■■□□□ 1.46
GPC1-202ENST00000420138 ANO1Q5XXA6 986 aa24.19■■□□□ 1.46
GPC1-202ENST00000420138 LRRC47Q8N1G4 583 aaKnown RBP24.19■■□□□ 1.46
GPC1-202ENST00000420138 LZTS2Q9BRK4 669 aa24.19■■□□□ 1.46
GPC1-202ENST00000420138 MYOZ2Q9NPC6 264 aa24.19■■□□□ 1.46
GPC1-202ENST00000420138 ZNF541Q9H0D2 1346 aa24.18■■□□□ 1.46
GPC1-202ENST00000420138 SYCE3A1L190 88 aa24.18■■□□□ 1.46
GPC1-202ENST00000420138 KLRF2D3W0D1 207 aa24.18■■□□□ 1.46
GPC1-202ENST00000420138 SOCS7O14512 581 aa24.18■■□□□ 1.46
GPC1-202ENST00000420138 PARP1P09874 1014 aaKnown RBP24.18■■□□□ 1.46
GPC1-202ENST00000420138 XBP1P17861 261 aa24.18■■□□□ 1.46
GPC1-202ENST00000420138 GNL2Q13823 731 aaKnown RBP24.18■■□□□ 1.46
GPC1-202ENST00000420138 NBPF9Q3BBW0 867 aa24.18■■□□□ 1.46
GPC1-202ENST00000420138 SYAP1Q96A49 352 aaPredicted RBP24.18■■□□□ 1.46
GPC1-202ENST00000420138 CSRNP1Q96S65 589 aa24.18■■□□□ 1.46
GPC1-202ENST00000420138 PANK2Q9BZ23 570 aa24.18■■□□□ 1.46
GPC1-202ENST00000420138 MPHOSPH10O00566 681 aaKnown RBP24.17■■□□□ 1.46
GPC1-202ENST00000420138 TOB1P50616 345 aaPredicted RBP24.17■■□□□ 1.46
GPC1-202ENST00000420138 JAG1P78504 1218 aa24.17■■□□□ 1.46
GPC1-202ENST00000420138 RRP1BQ14684 758 aaKnown RBP24.17■■□□□ 1.46
GPC1-202ENST00000420138 CCDC183Q5T5S1 534 aa24.17■■□□□ 1.46
GPC1-202ENST00000420138 PIBF1Q8WXW3 757 aa24.17■■□□□ 1.46
GPC1-202ENST00000420138 SPZ1Q9BXG8 430 aa24.17■■□□□ 1.46
GPC1-202ENST00000420138 CPVLQ9H3G5 476 aa24.17■■□□□ 1.46
GPC1-202ENST00000420138 EGFRP00533 1210 aa24.17■■□□□ 1.46
GPC1-202ENST00000420138 GMPSP49915 693 aaPredicted RBP24.17■■□□□ 1.46
GPC1-202ENST00000420138 SIAH1Q8IUQ4 282 aa24.17■■□□□ 1.46
GPC1-202ENST00000420138 PGAP2Q9UHJ9 254 aa24.17■■□□□ 1.46
GPC1-202ENST00000420138 PCDHA7Q9UN72 937 aa24.17■■□□□ 1.46
GPC1-202ENST00000420138 GOLGA6L4A6NEF3 574 aa24.16■■□□□ 1.46
GPC1-202ENST00000420138 SMARCA1P28370 1054 aa24.16■■□□□ 1.46
GPC1-202ENST00000420138 MMP14P50281 582 aa24.16■■□□□ 1.46
GPC1-202ENST00000420138 PTPAQ15257 358 aa24.16■■□□□ 1.46
GPC1-202ENST00000420138 TNFRSF25Q93038 417 aa24.16■■□□□ 1.46
GPC1-202ENST00000420138 SLC39A14Q15043 492 aa24.15■■□□□ 1.46
GPC1-202ENST00000420138 SF3A1Q15459 793 aaKnown RBP24.15■■□□□ 1.46
GPC1-202ENST00000420138 CDAN1Q8IWY9 1227 aa24.15■■□□□ 1.46
GPC1-202ENST00000420138 KCNG4Q8TDN1 519 aa24.15■■□□□ 1.46
GPC1-202ENST00000420138 DPF2Q92785 391 aa24.15■■□□□ 1.46
GPC1-202ENST00000420138 MKL1Q969V6 931 aa24.15■■□□□ 1.46
GPC1-202ENST00000420138 STK38Q15208 465 aa24.14■■□□□ 1.46
GPC1-202ENST00000420138 EARS2Q5JPH6 523 aaKnown RBP24.14■■□□□ 1.46
GPC1-202ENST00000420138 TYW1BQ6NUM6 668 aa24.14■■□□□ 1.46
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms