RNA–Protein interactions for RNA: ENST00000419459.1

LINC00642-201, long intergenic non-protein coding RNA 642, humanhuman

TSL 2 BASIC

Gene LINC00642, Length 2,026 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00642-201ENST00000419459 SWAP70Q9UH65 585 aa14.9□□□□□ -0.02
LINC00642-201ENST00000419459 ZHX1Q9UKY1 873 aaPredicted RBP14.9□□□□□ -0.02
LINC00642-201ENST00000419459 TPCN1Q9ULQ1 816 aa14.9□□□□□ -0.02
LINC00642-201ENST00000419459 TRAF5O00463 557 aa14.9□□□□□ -0.02
LINC00642-201ENST00000419459 STK3Q13188 491 aa14.9□□□□□ -0.02
LINC00642-201ENST00000419459 METTL16Q86W50 562 aaKnown RBP14.9□□□□□ -0.02
LINC00642-201ENST00000419459 IQCA1Q86XH1 822 aa14.9□□□□□ -0.02
LINC00642-201ENST00000419459 CEP95Q96GE4 821 aa14.9□□□□□ -0.02
LINC00642-201ENST00000419459 ZSCAN10Q96SZ4 725 aaPredicted RBP14.9□□□□□ -0.02
LINC00642-201ENST00000419459 ARID3AQ99856 593 aa14.9□□□□□ -0.02
LINC00642-201ENST00000419459 FUCA2Q9BTY2 467 aa14.9□□□□□ -0.02
LINC00642-201ENST00000419459 MYL10Q9BUA6 226 aa14.9□□□□□ -0.02
LINC00642-201ENST00000419459 ZNF287Q9HBT7 754 aa14.9□□□□□ -0.02
LINC00642-201ENST00000419459 HERC5Q9UII4 1024 aaKnown RBP14.9□□□□□ -0.02
LINC00642-201ENST00000419459 STX8Q9UNK0 236 aa14.9□□□□□ -0.02
LINC00642-201ENST00000419459 MYH4Q9Y623 1939 aa14.9□□□□□ -0.02
LINC00642-201ENST00000419459 CEP350Q5VT06 3117 aa14.89□□□□□ -0.03
LINC00642-201ENST00000419459 ZSCAN22P10073 491 aaPredicted RBP14.89□□□□□ -0.03
LINC00642-201ENST00000419459 PDIA4P13667 645 aaKnown RBP14.89□□□□□ -0.03
LINC00642-201ENST00000419459 TATDN1Q6P1N9 297 aa14.89□□□□□ -0.03
LINC00642-201ENST00000419459 RASGRP2Q7LDG7 609 aa14.89□□□□□ -0.03
LINC00642-201ENST00000419459 CCDC84Q86UT8 332 aaPredicted RBP14.89□□□□□ -0.03
LINC00642-201ENST00000419459 ZC3H15Q8WU90 426 aaKnown RBP14.89□□□□□ -0.03
LINC00642-201ENST00000419459 LY9Q9HBG7 655 aa14.89□□□□□ -0.03
LINC00642-201ENST00000419459 ANGEL1Q9UNK9 670 aaKnown RBP14.89□□□□□ -0.03
LINC00642-201ENST00000419459 TCHHQ07283 1943 aa14.89□□□□□ -0.03
LINC00642-201ENST00000419459 GREB1LQ9C091 1923 aaPredicted RBP14.89□□□□□ -0.03
LINC00642-201ENST00000419459 SH2B2O14492 632 aaPredicted RBP14.88□□□□□ -0.03
LINC00642-201ENST00000419459 GH2P01242 217 aa14.88□□□□□ -0.03
LINC00642-201ENST00000419459 CBX1P83916 185 aa14.88□□□□□ -0.03
LINC00642-201ENST00000419459 MTMR7Q9Y216 660 aa14.88□□□□□ -0.03
LINC00642-201ENST00000419459 ZSCAN21Q9Y5A6 473 aaPredicted RBP14.88□□□□□ -0.03
LINC00642-201ENST00000419459 PPFIA3O75145 1194 aa14.88□□□□□ -0.03
LINC00642-201ENST00000419459 SEC23AQ15436 765 aa14.88□□□□□ -0.03
LINC00642-201ENST00000419459 ME3Q16798 604 aa14.88□□□□□ -0.03
LINC00642-201ENST00000419459 RCSD1Q6JBY9 416 aa14.88□□□□□ -0.03
LINC00642-201ENST00000419459 CCDC144CPQ8IYA2 1237 aa14.88□□□□□ -0.03
LINC00642-201ENST00000419459 NECAB1Q8N987 351 aa14.88□□□□□ -0.03
LINC00642-201ENST00000419459 AGXT2Q9BYV1 514 aa14.88□□□□□ -0.03
LINC00642-201ENST00000419459 OTOFQ9HC10 1997 aa14.87□□□□□ -0.03
LINC00642-201ENST00000419459 ERICH2A1L162 156 aa14.87□□□□□ -0.03
LINC00642-201ENST00000419459 PHF20L1A8MW92 1017 aa14.87□□□□□ -0.03
LINC00642-201ENST00000419459 INPP5BP32019 993 aa14.87□□□□□ -0.03
LINC00642-201ENST00000419459 WTAPQ15007 396 aa14.87□□□□□ -0.03
LINC00642-201ENST00000419459 SEPT2Q15019 361 aa14.87□□□□□ -0.03
LINC00642-201ENST00000419459 SART3Q15020 963 aaKnown RBP14.87□□□□□ -0.03
LINC00642-201ENST00000419459 ZKSCAN4Q969J2 545 aaPredicted RBP14.87□□□□□ -0.03
LINC00642-201ENST00000419459 ZNF830Q96NB3 372 aaPredicted RBP14.87□□□□□ -0.03
LINC00642-201ENST00000419459 ZNF408Q9H9D4 720 aa14.87□□□□□ -0.03
LINC00642-201ENST00000419459 GPBP1L1Q9HC44 474 aaPredicted RBP14.87□□□□□ -0.03
LINC00642-201ENST00000419459 KLF18A0A0U1RQI7 1052 aa14.87□□□□□ -0.03
LINC00642-201ENST00000419459 ATP2B2Q01814 1243 aa14.87□□□□□ -0.03
LINC00642-201ENST00000419459 ABCB5Q2M3G0 1257 aa14.87□□□□□ -0.03
LINC00642-201ENST00000419459 IFIT1BQ5T764 474 aaKnown RBP14.87□□□□□ -0.03
LINC00642-201ENST00000419459 NFXL1Q6ZNB6 911 aa14.87□□□□□ -0.03
LINC00642-201ENST00000419459 MOB2Q70IA6 237 aa14.87□□□□□ -0.03
LINC00642-201ENST00000419459 MICU3Q86XE3 530 aa14.87□□□□□ -0.03
LINC00642-201ENST00000419459 NEDD1Q8NHV4 660 aa14.87□□□□□ -0.03
LINC00642-201ENST00000419459 CDCA5Q96FF9 252 aa14.87□□□□□ -0.03
LINC00642-201ENST00000419459 TMEM87BQ96K49 555 aa14.87□□□□□ -0.03
LINC00642-201ENST00000419459 WRNIP1Q96S55 665 aa14.87□□□□□ -0.03
LINC00642-201ENST00000419459 BAZ2BQ9UIF8 2168 aaKnown RBP14.86□□□□□ -0.03
LINC00642-201ENST00000419459 TBC1D12O60347 775 aa14.86□□□□□ -0.03
LINC00642-201ENST00000419459 GUCY1A2P33402 732 aa14.86□□□□□ -0.03
LINC00642-201ENST00000419459 CCT2P78371 535 aaKnown RBP14.86□□□□□ -0.03
LINC00642-201ENST00000419459 CDC37L1Q7L3B6 337 aa14.86□□□□□ -0.03
LINC00642-201ENST00000419459 GDPD2Q9HCC8 539 aa14.86□□□□□ -0.03
LINC00642-201ENST00000419459 NCOA5Q9HCD5 579 aaKnown RBP14.86□□□□□ -0.03
LINC00642-201ENST00000419459 LIMCH1Q9UPQ0 1083 aa14.86□□□□□ -0.03
LINC00642-201ENST00000419459 PPP2R3BQ9Y5P8 575 aa14.86□□□□□ -0.03
LINC00642-201ENST00000419459 WDR19Q8NEZ3 1342 aa14.86□□□□□ -0.03
LINC00642-201ENST00000419459 RIOK3O14730 519 aaKnown RBP14.85□□□□□ -0.03
LINC00642-201ENST00000419459 STX6O43752 255 aa14.85□□□□□ -0.03
LINC00642-201ENST00000419459 MAP3K10Q02779 954 aa14.85□□□□□ -0.03
LINC00642-201ENST00000419459 ST3GAL1Q11201 340 aa14.85□□□□□ -0.03
LINC00642-201ENST00000419459 APOA5Q6Q788 366 aa14.85□□□□□ -0.03
LINC00642-201ENST00000419459 LRRC47Q8N1G4 583 aaKnown RBP14.85□□□□□ -0.03
LINC00642-201ENST00000419459 PLIN4Q96Q06 1357 aa14.85□□□□□ -0.03
LINC00642-201ENST00000419459 GOLGA8BA8MQT2 603 aa14.85□□□□□ -0.03
LINC00642-201ENST00000419459 F13A1P00488 732 aa14.85□□□□□ -0.03
LINC00642-201ENST00000419459 CCDC192P0DO97 292 aa14.85□□□□□ -0.03
LINC00642-201ENST00000419459 CAP2P40123 477 aa14.85□□□□□ -0.03
LINC00642-201ENST00000419459 LDHDQ86WU2 507 aa14.85□□□□□ -0.03
LINC00642-201ENST00000419459 MTMR4Q9NYA4 1195 aa14.85□□□□□ -0.03
LINC00642-201ENST00000419459 OGFRQ9NZT2 677 aa14.85□□□□□ -0.03
LINC00642-201ENST00000419459 ZBTB21Q9ULJ3 1066 aa14.85□□□□□ -0.03
LINC00642-201ENST00000419459 CNPY2Q9Y2B0 182 aa14.85□□□□□ -0.03
LINC00642-201ENST00000419459 DOCK1Q14185 1865 aa14.84□□□□□ -0.03
LINC00642-201ENST00000419459 CCDC69A6NI79 296 aa14.84□□□□□ -0.03
LINC00642-201ENST00000419459 PDIA3P30101 505 aaKnown RBP14.84□□□□□ -0.03
LINC00642-201ENST00000419459 LIFRP42702 1097 aa14.84□□□□□ -0.03
LINC00642-201ENST00000419459 GABPB1Q06547 395 aaPredicted RBP14.84□□□□□ -0.03
LINC00642-201ENST00000419459 ANKRD1Q15327 319 aa14.84□□□□□ -0.03
LINC00642-201ENST00000419459 SUPT20HL1Q3ZLR7 823 aa14.84□□□□□ -0.03
LINC00642-201ENST00000419459 CCDC83Q8IWF9 413 aa14.84□□□□□ -0.03
LINC00642-201ENST00000419459 NUP133Q8WUM0 1156 aa14.84□□□□□ -0.03
LINC00642-201ENST00000419459 KLRG1Q96E93 195 aa14.84□□□□□ -0.03
LINC00642-201ENST00000419459 CCDC17Q96LX7 622 aa14.84□□□□□ -0.03
LINC00642-201ENST00000419459 TMEM47Q9BQJ4 181 aa14.84□□□□□ -0.03
LINC00642-201ENST00000419459 CLIP2Q9UDT6 1046 aa14.84□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms