RNA–Protein interactions for RNA: ENST00000418457.6

VPS41-206, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 5

Gene VPS41, Length 532 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-206ENST00000418457 FBXL18Q96ME1 805 aa4.1□□□□□ -1.75
VPS41-206ENST00000418457 HIRIP3Q9BW71 556 aaPredicted RBP4.1□□□□□ -1.75
VPS41-206ENST00000418457 PHAXQ9H814 394 aaKnown RBP4.1□□□□□ -1.75
VPS41-206ENST00000418457 SUCOQ9UBS9 1254 aaKnown RBP4.1□□□□□ -1.75
VPS41-206ENST00000418457 ZC3H7BQ9UGR2 993 aaKnown RBP4.1□□□□□ -1.75
VPS41-206ENST00000418457 KCNH3Q9ULD8 1083 aa4.1□□□□□ -1.75
VPS41-206ENST00000418457 CAPN6Q9Y6Q1 641 aa4.1□□□□□ -1.75
VPS41-206ENST00000418457 U3KQE9 123 aa4.1□□□□□ -1.75
VPS41-206ENST00000418457 COL17A1Q9UMD9 1497 aaPredicted RBP4.1□□□□□ -1.75
VPS41-206ENST00000418457 TNK2Q07912 1038 aa4.09□□□□□ -1.75
VPS41-206ENST00000418457 IFI16Q16666 785 aaKnown RBP4.09□□□□□ -1.75
VPS41-206ENST00000418457 NKPD1Q17RQ9 610 aa4.09□□□□□ -1.75
VPS41-206ENST00000418457 TDRD10Q5VZ19 366 aaKnown RBP4.09□□□□□ -1.75
VPS41-206ENST00000418457 LARP1BQ659C4 914 aaKnown RBP4.09□□□□□ -1.75
VPS41-206ENST00000418457 PLD6Q8N2A8 252 aaKnown RBP4.09□□□□□ -1.75
VPS41-206ENST00000418457 DTWD2Q8NBA8 298 aa4.09□□□□□ -1.75
VPS41-206ENST00000418457 PIWIL2Q8TC59 973 aaKnown RBP4.09□□□□□ -1.75
VPS41-206ENST00000418457 HNRNPLLQ8WVV9 542 aaKnown RBP4.09□□□□□ -1.75
VPS41-206ENST00000418457 SMARCC1Q92922 1105 aaPredicted RBP4.09□□□□□ -1.75
VPS41-206ENST00000418457 VWCEQ96DN2 955 aa4.09□□□□□ -1.75
VPS41-206ENST00000418457 Q96M66 194 aa4.09□□□□□ -1.75
VPS41-206ENST00000418457 MKRN2Q9H000 416 aaKnown RBP4.09□□□□□ -1.75
VPS41-206ENST00000418457 TNKS2Q9H2K2 1166 aa4.09□□□□□ -1.75
VPS41-206ENST00000418457 ZNF214Q9UL59 606 aaPredicted RBP4.09□□□□□ -1.75
VPS41-206ENST00000418457 PLAGL2Q9UPG8 496 aa4.09□□□□□ -1.75
VPS41-206ENST00000418457 LTBP3Q9NS15 1303 aa4.09□□□□□ -1.75
VPS41-206ENST00000418457 TMEM265A0A087WTH1 108 aa4.08□□□□□ -1.76
VPS41-206ENST00000418457 C9IYK1 514 aa4.08□□□□□ -1.76
VPS41-206ENST00000418457 LRRN2O75325 713 aa4.08□□□□□ -1.76
VPS41-206ENST00000418457 SSTR4P31391 388 aa4.08□□□□□ -1.76
VPS41-206ENST00000418457 CLCN7P51798 805 aa4.08□□□□□ -1.76
VPS41-206ENST00000418457 SLC7A5Q01650 507 aa4.08□□□□□ -1.76
VPS41-206ENST00000418457 FXNQ16595 210 aa4.08□□□□□ -1.76
VPS41-206ENST00000418457 MSMPQ1L6U9 139 aa4.08□□□□□ -1.76
VPS41-206ENST00000418457 GNPTABQ3T906 1256 aa4.08□□□□□ -1.76
VPS41-206ENST00000418457 ZMYM1Q5SVZ6 1142 aa4.08□□□□□ -1.76
VPS41-206ENST00000418457 CDKAL1Q5VV42 579 aa4.08□□□□□ -1.76
VPS41-206ENST00000418457 VHLLQ6RSH7 139 aa4.08□□□□□ -1.76
VPS41-206ENST00000418457 PPFIBP1Q86W92 1011 aa4.08□□□□□ -1.76
VPS41-206ENST00000418457 SPACA3Q8IXA5 215 aa4.08□□□□□ -1.76
VPS41-206ENST00000418457 CCDC144CPQ8IYA2 1237 aa4.08□□□□□ -1.76
VPS41-206ENST00000418457 UBXN4Q92575 508 aa4.08□□□□□ -1.76
VPS41-206ENST00000418457 TRIM55Q9BYV6 548 aa4.08□□□□□ -1.76
VPS41-206ENST00000418457 ASCC2Q9H1I8 757 aaPredicted RBP4.08□□□□□ -1.76
VPS41-206ENST00000418457 FAM86C1Q9NVL1 165 aa4.08□□□□□ -1.76
VPS41-206ENST00000418457 BSDC1Q9NW68 430 aaPredicted RBP4.08□□□□□ -1.76
VPS41-206ENST00000418457 PCDHB10Q9UN67 800 aa4.08□□□□□ -1.76
VPS41-206ENST00000418457 SNX11Q9Y5W9 270 aa4.08□□□□□ -1.76
VPS41-206ENST00000418457 H3BS24 57 aa4.07□□□□□ -1.76
VPS41-206ENST00000418457 RBAK-RBAKDNI3L0D1 243 aa4.07□□□□□ -1.76
VPS41-206ENST00000418457 U2SURPO15042 1029 aaKnown RBP4.07□□□□□ -1.76
VPS41-206ENST00000418457 KLF4O43474 513 aa4.07□□□□□ -1.76
VPS41-206ENST00000418457 DDAH1O94760 285 aa4.07□□□□□ -1.76
VPS41-206ENST00000418457 TP53P04637 393 aaPredicted RBP4.07□□□□□ -1.76
VPS41-206ENST00000418457 CD97P48960 835 aa4.07□□□□□ -1.76
VPS41-206ENST00000418457 RBL2Q08999 1139 aa4.07□□□□□ -1.76
VPS41-206ENST00000418457 NBPF9Q3BBW0 867 aa4.07□□□□□ -1.76
VPS41-206ENST00000418457 AXDND1Q5T1B0 1012 aaPredicted RBP4.07□□□□□ -1.76
VPS41-206ENST00000418457 NBPF6Q5VWK0 638 aa4.07□□□□□ -1.76
VPS41-206ENST00000418457 KIAA1211LQ6NV74 962 aa4.07□□□□□ -1.76
VPS41-206ENST00000418457 C7orf61Q8IZ16 206 aa4.07□□□□□ -1.76
VPS41-206ENST00000418457 MISP3Q96FF7 219 aa4.07□□□□□ -1.76
VPS41-206ENST00000418457 HRASLS5Q96KN8 279 aa4.07□□□□□ -1.76
VPS41-206ENST00000418457 NBPF4Q96M43 638 aa4.07□□□□□ -1.76
VPS41-206ENST00000418457 HSPA12BQ96MM6 686 aa4.07□□□□□ -1.76
VPS41-206ENST00000418457 TRIT1Q9H3H1 467 aaKnown RBP4.07□□□□□ -1.76
VPS41-206ENST00000418457 USP35Q9P2H5 1018 aa4.07□□□□□ -1.76
VPS41-206ENST00000418457 FBXL21Q9UKT6 434 aa4.07□□□□□ -1.76
VPS41-206ENST00000418457 PCDHB12Q9Y5F1 795 aa4.07□□□□□ -1.76
VPS41-206ENST00000418457 ST14Q9Y5Y6 855 aa4.07□□□□□ -1.76
VPS41-206ENST00000418457 MED26O95402 600 aa4.06□□□□□ -1.76
VPS41-206ENST00000418457 SPINK2P20155 84 aa4.06□□□□□ -1.76
VPS41-206ENST00000418457 PRKCQQ04759 706 aa4.06□□□□□ -1.76
VPS41-206ENST00000418457 SNW1Q13573 536 aaKnown RBP4.06□□□□□ -1.76
VPS41-206ENST00000418457 AUHQ13825 339 aaKnown RBP4.06□□□□□ -1.76
VPS41-206ENST00000418457 RAB33AQ14088 237 aa4.06□□□□□ -1.76
VPS41-206ENST00000418457 NCAPHQ15003 741 aa4.06□□□□□ -1.76
VPS41-206ENST00000418457 AOC3Q16853 763 aa4.06□□□□□ -1.76
VPS41-206ENST00000418457 CLEC16AQ2KHT3 1053 aa4.06□□□□□ -1.76
VPS41-206ENST00000418457 ANKRD39Q53RE8 183 aa4.06□□□□□ -1.76
VPS41-206ENST00000418457 SOGA3Q5TF21 947 aa4.06□□□□□ -1.76
VPS41-206ENST00000418457 DCAF15Q66K64 600 aa4.06□□□□□ -1.76
VPS41-206ENST00000418457 C6orf15Q6UXA7 325 aaPredicted RBP4.06□□□□□ -1.76
VPS41-206ENST00000418457 THAP5Q7Z6K1 395 aa4.06□□□□□ -1.76
VPS41-206ENST00000418457 FAM178BQ8IXR5 827 aa4.06□□□□□ -1.76
VPS41-206ENST00000418457 STK11IPQ8N1F8 1099 aa4.06□□□□□ -1.76
VPS41-206ENST00000418457 PMFBP1Q8TBY8 1022 aa4.06□□□□□ -1.76
VPS41-206ENST00000418457 KLHL6Q8WZ60 621 aa4.06□□□□□ -1.76
VPS41-206ENST00000418457 DNAJC2Q99543 621 aaKnown RBP4.06□□□□□ -1.76
VPS41-206ENST00000418457 GPR62Q9BZJ7 368 aa4.06□□□□□ -1.76
VPS41-206ENST00000418457 PRDM14Q9GZV8 571 aa4.06□□□□□ -1.76
VPS41-206ENST00000418457 SEMA3GQ9NS98 782 aa4.06□□□□□ -1.76
VPS41-206ENST00000418457 PCMTD2Q9NV79 361 aa4.06□□□□□ -1.76
VPS41-206ENST00000418457 GPATCH2Q9NW75 528 aa4.06□□□□□ -1.76
VPS41-206ENST00000418457 ZSWIM5Q9P217 1185 aa4.06□□□□□ -1.76
VPS41-206ENST00000418457 VAV3Q9UKW4 847 aa4.06□□□□□ -1.76
VPS41-206ENST00000418457 PITPNM2Q9BZ72 1349 aa4.05□□□□□ -1.76
VPS41-206ENST00000418457 KIAA1324LA8MWY0 1029 aaPredicted RBP4.05□□□□□ -1.76
VPS41-206ENST00000418457 B2RBV5 119 aa4.05□□□□□ -1.76
VPS41-206ENST00000418457 SRFP11831 508 aa4.05□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms