RNA–Protein interactions for RNA: ENST00000418454.2

HMGA1P6-201, Transcript of high mobility group AT-hook 1 pseudogene 6, humanhuman

BASIC

Gene HMGA1P6, Length 391 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1P6-201ENST00000418454 FOXP1Q9H334 677 aaPredicted RBP11.71□□□□□ -0.53
HMGA1P6-201ENST00000418454 RNF181Q9P0P0 153 aa11.71□□□□□ -0.53
HMGA1P6-201ENST00000418454 MAD2L2Q9UI95 211 aa11.71□□□□□ -0.53
HMGA1P6-201ENST00000418454 ZNF112Q9UJU3 913 aa11.71□□□□□ -0.53
HMGA1P6-201ENST00000418454 MORC2Q9Y6X9 1032 aaPredicted RBP11.71□□□□□ -0.53
HMGA1P6-201ENST00000418454 CLRN2A0PK11 232 aa11.7□□□□□ -0.54
HMGA1P6-201ENST00000418454 IQCA1LA6NCM1 817 aa11.7□□□□□ -0.54
HMGA1P6-201ENST00000418454 GLTPD2A6NH11 291 aa11.7□□□□□ -0.54
HMGA1P6-201ENST00000418454 UNCXA6NJT0 531 aa11.7□□□□□ -0.54
HMGA1P6-201ENST00000418454 NMT2O60551 498 aa11.7□□□□□ -0.54
HMGA1P6-201ENST00000418454 CALML3P27482 149 aa11.7□□□□□ -0.54
HMGA1P6-201ENST00000418454 CAP2P40123 477 aa11.7□□□□□ -0.54
HMGA1P6-201ENST00000418454 KRT85P78386 507 aa11.7□□□□□ -0.54
HMGA1P6-201ENST00000418454 GPR162Q16538 588 aa11.7□□□□□ -0.54
HMGA1P6-201ENST00000418454 PFKFB3Q16875 520 aaPredicted RBP11.7□□□□□ -0.54
HMGA1P6-201ENST00000418454 SRBD1Q8N5C6 995 aaKnown RBP11.7□□□□□ -0.54
HMGA1P6-201ENST00000418454 CCDC12Q8WUD4 166 aaPredicted RBP11.7□□□□□ -0.54
HMGA1P6-201ENST00000418454 DDX11Q96FC9 970 aa11.7□□□□□ -0.54
HMGA1P6-201ENST00000418454 SLC26A6Q9BXS9 759 aa11.7□□□□□ -0.54
HMGA1P6-201ENST00000418454 RIOX1Q9H6W3 641 aa11.7□□□□□ -0.54
HMGA1P6-201ENST00000418454 VEZTQ9HBM0 779 aa11.7□□□□□ -0.54
HMGA1P6-201ENST00000418454 ARHGEF10LQ9HCE6 1279 aa11.7□□□□□ -0.54
HMGA1P6-201ENST00000418454 CLIP2Q9UDT6 1046 aa11.7□□□□□ -0.54
HMGA1P6-201ENST00000418454 HACL1Q9UJ83 578 aa11.7□□□□□ -0.54
HMGA1P6-201ENST00000418454 GREB1LQ9C091 1923 aaPredicted RBP11.69□□□□□ -0.54
HMGA1P6-201ENST00000418454 VPS37CA5D8V6 355 aaPredicted RBP11.69□□□□□ -0.54
HMGA1P6-201ENST00000418454 KLRF2D3W0D1 207 aa11.69□□□□□ -0.54
HMGA1P6-201ENST00000418454 PDHBP11177 359 aa11.69□□□□□ -0.54
HMGA1P6-201ENST00000418454 RESTQ13127 1097 aa11.69□□□□□ -0.54
HMGA1P6-201ENST00000418454 MCTP2Q6DN12 878 aa11.69□□□□□ -0.54
HMGA1P6-201ENST00000418454 PNMA8AQ86V59 439 aaPredicted RBP11.69□□□□□ -0.54
HMGA1P6-201ENST00000418454 GLT8D2Q9H1C3 349 aa11.69□□□□□ -0.54
HMGA1P6-201ENST00000418454 PNMA2Q9UL42 364 aa11.69□□□□□ -0.54
HMGA1P6-201ENST00000418454 TMX2Q9Y320 296 aa11.69□□□□□ -0.54
HMGA1P6-201ENST00000418454 V9GY48 417 aaPredicted RBP11.69□□□□□ -0.54
HMGA1P6-201ENST00000418454 SBF1O95248 1867 aa11.69□□□□□ -0.54
HMGA1P6-201ENST00000418454 PHF20L1A8MW92 1017 aa11.68□□□□□ -0.54
HMGA1P6-201ENST00000418454 MPHOSPH10O00566 681 aaKnown RBP11.68□□□□□ -0.54
HMGA1P6-201ENST00000418454 MBD3O95983 291 aa11.68□□□□□ -0.54
HMGA1P6-201ENST00000418454 MMP1P03956 469 aa11.68□□□□□ -0.54
HMGA1P6-201ENST00000418454 SCG2P13521 617 aa11.68□□□□□ -0.54
HMGA1P6-201ENST00000418454 EEF2P13639 858 aaKnown RBP11.68□□□□□ -0.54
HMGA1P6-201ENST00000418454 NCLP19338 710 aaKnown RBP11.68□□□□□ -0.54
HMGA1P6-201ENST00000418454 GUCY1A2P33402 732 aa11.68□□□□□ -0.54
HMGA1P6-201ENST00000418454 ICA1Q05084 483 aa11.68□□□□□ -0.54
HMGA1P6-201ENST00000418454 ZNF543Q08ER8 600 aa11.68□□□□□ -0.54
HMGA1P6-201ENST00000418454 PKN1Q16512 942 aa11.68□□□□□ -0.54
HMGA1P6-201ENST00000418454 TBC1D10BQ4KMP7 808 aaPredicted RBP11.68□□□□□ -0.54
HMGA1P6-201ENST00000418454 KRT40Q6A162 431 aa11.68□□□□□ -0.54
HMGA1P6-201ENST00000418454 BTNL9Q6UXG8 535 aa11.68□□□□□ -0.54
HMGA1P6-201ENST00000418454 CDC37L1Q7L3B6 337 aa11.68□□□□□ -0.54
HMGA1P6-201ENST00000418454 SAMD7Q7Z3H4 446 aa11.68□□□□□ -0.54
HMGA1P6-201ENST00000418454 SIAH1Q8IUQ4 282 aa11.68□□□□□ -0.54
HMGA1P6-201ENST00000418454 CCDC148Q8NFR7 591 aa11.68□□□□□ -0.54
HMGA1P6-201ENST00000418454 PHKBQ93100 1093 aa11.68□□□□□ -0.54
HMGA1P6-201ENST00000418454 MYL10Q9BUA6 226 aa11.68□□□□□ -0.54
HMGA1P6-201ENST00000418454 ZNF341Q9BYN7 854 aa11.68□□□□□ -0.54
HMGA1P6-201ENST00000418454 TMEM39BQ9GZU3 492 aa11.68□□□□□ -0.54
HMGA1P6-201ENST00000418454 BRMS1Q9HCU9 246 aa11.68□□□□□ -0.54
HMGA1P6-201ENST00000418454 CNTNAP5Q8WYK1 1306 aa11.67□□□□□ -0.54
HMGA1P6-201ENST00000418454 ESYT2A0FGR8 921 aa11.67□□□□□ -0.54
HMGA1P6-201ENST00000418454 RXRAP19793 462 aa11.67□□□□□ -0.54
HMGA1P6-201ENST00000418454 PPP1R18Q6NYC8 613 aa11.67□□□□□ -0.54
HMGA1P6-201ENST00000418454 CCDC144CPQ8IYA2 1237 aa11.67□□□□□ -0.54
HMGA1P6-201ENST00000418454 DAGLBQ8NCG7 672 aa11.67□□□□□ -0.54
HMGA1P6-201ENST00000418454 LPAR1Q92633 364 aa11.67□□□□□ -0.54
HMGA1P6-201ENST00000418454 MTMR8Q96EF0 704 aa11.67□□□□□ -0.54
HMGA1P6-201ENST00000418454 RRP36Q96EU6 259 aaKnown RBP11.67□□□□□ -0.54
HMGA1P6-201ENST00000418454 WDR18Q9BV38 432 aa11.67□□□□□ -0.54
HMGA1P6-201ENST00000418454 PHF20Q9BVI0 1012 aa11.67□□□□□ -0.54
HMGA1P6-201ENST00000418454 MAF1Q9H063 256 aa11.67□□□□□ -0.54
HMGA1P6-201ENST00000418454 GOPCQ9HD26 462 aa11.67□□□□□ -0.54
HMGA1P6-201ENST00000418454 RCOR1Q9UKL0 485 aa11.67□□□□□ -0.54
HMGA1P6-201ENST00000418454 ZBTB21Q9ULJ3 1066 aa11.67□□□□□ -0.54
HMGA1P6-201ENST00000418454 F5H6K3 240 aa11.66□□□□□ -0.54
HMGA1P6-201ENST00000418454 DDNO94850 711 aaPredicted RBP11.66□□□□□ -0.54
HMGA1P6-201ENST00000418454 GH2P01242 217 aa11.66□□□□□ -0.54
HMGA1P6-201ENST00000418454 FDX1P10109 184 aa11.66□□□□□ -0.54
HMGA1P6-201ENST00000418454 GNA11P29992 359 aa11.66□□□□□ -0.54
HMGA1P6-201ENST00000418454 EPS15P42566 896 aa11.66□□□□□ -0.54
HMGA1P6-201ENST00000418454 TRAPPC10P48553 1259 aa11.66□□□□□ -0.54
HMGA1P6-201ENST00000418454 KIF23Q02241 960 aaPredicted RBP11.66□□□□□ -0.54
HMGA1P6-201ENST00000418454 KLRC3Q07444 240 aa11.66□□□□□ -0.54
HMGA1P6-201ENST00000418454 SEPT2Q15019 361 aa11.66□□□□□ -0.54
HMGA1P6-201ENST00000418454 KLHL40Q2TBA0 621 aa11.66□□□□□ -0.54
HMGA1P6-201ENST00000418454 SLC4A8Q2Y0W8 1093 aa11.66□□□□□ -0.54
HMGA1P6-201ENST00000418454 RILPL1Q5EBL4 403 aa11.66□□□□□ -0.54
HMGA1P6-201ENST00000418454 NOL9Q5SY16 702 aaKnown RBP11.66□□□□□ -0.54
HMGA1P6-201ENST00000418454 ANGEL2Q5VTE6 544 aaKnown RBP11.66□□□□□ -0.54
HMGA1P6-201ENST00000418454 SLFN13Q68D06 897 aa11.66□□□□□ -0.54
HMGA1P6-201ENST00000418454 MCTP1Q6DN14 999 aa11.66□□□□□ -0.54
HMGA1P6-201ENST00000418454 BICD2Q8TD16 824 aa11.66□□□□□ -0.54
HMGA1P6-201ENST00000418454 DCPSQ96C86 337 aaKnown RBP11.66□□□□□ -0.54
HMGA1P6-201ENST00000418454 AS3MTQ9HBK9 375 aa11.66□□□□□ -0.54
HMGA1P6-201ENST00000418454 LMBRD1Q9NUN5 540 aa11.66□□□□□ -0.54
HMGA1P6-201ENST00000418454 POLR3EQ9NVU0 708 aa11.66□□□□□ -0.54
HMGA1P6-201ENST00000418454 BARHL2Q9NY43 387 aa11.66□□□□□ -0.54
HMGA1P6-201ENST00000418454 RTEL1Q9NZ71 1219 aa11.66□□□□□ -0.54
HMGA1P6-201ENST00000418454 SEC63Q9UGP8 760 aaKnown RBP11.66□□□□□ -0.54
HMGA1P6-201ENST00000418454 ADAMTSL1Q8N6G6 1762 aa11.66□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms