RNA–Protein interactions for RNA: ENST00000418310.5

LIMK1-202, Transcript of LIM domain kinase 1, humanhuman

TSL 5 BASIC

Gene LIMK1, Length 3,360 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1-202ENST00000418310 RTL9Q8NET4 1388 aa13.49□□□□□ -0.25
LIMK1-202ENST00000418310 USP17L8P0C7I0 530 aa13.49□□□□□ -0.25
LIMK1-202ENST00000418310 RHOXF2BP0C7M4 288 aa13.49□□□□□ -0.25
LIMK1-202ENST00000418310 ZFP91Q96JP5 570 aaPredicted RBP13.49□□□□□ -0.25
LIMK1-202ENST00000418310 RHOXF2Q9BQY4 288 aa13.49□□□□□ -0.25
LIMK1-202ENST00000418310 RNF225M0QZC1 329 aaPredicted RBP13.49□□□□□ -0.25
LIMK1-202ENST00000418310 SASH3O75995 380 aa13.49□□□□□ -0.25
LIMK1-202ENST00000418310 KIF20AO95235 890 aa13.49□□□□□ -0.25
LIMK1-202ENST00000418310 TROAPQ12815 778 aa13.49□□□□□ -0.25
LIMK1-202ENST00000418310 FILIP1LQ4L180 1135 aa13.49□□□□□ -0.25
LIMK1-202ENST00000418310 SPATA1Q5VX52 437 aa13.49□□□□□ -0.25
LIMK1-202ENST00000418310 MCM9Q9NXL9 1143 aa13.49□□□□□ -0.25
LIMK1-202ENST00000418310 XDHP47989 1333 aa13.48□□□□□ -0.25
LIMK1-202ENST00000418310 ZBTB22O15209 634 aa13.48□□□□□ -0.25
LIMK1-202ENST00000418310 KCNJ6P48051 423 aa13.48□□□□□ -0.25
LIMK1-202ENST00000418310 MECOMQ03112 1051 aa13.48□□□□□ -0.25
LIMK1-202ENST00000418310 FAM182BQ5T319 152 aa13.48□□□□□ -0.25
LIMK1-202ENST00000418310 WWC2Q6AWC2 1192 aa13.48□□□□□ -0.25
LIMK1-202ENST00000418310 KANK3Q6NY19 840 aa13.48□□□□□ -0.25
LIMK1-202ENST00000418310 NEK11Q8NG66 645 aa13.48□□□□□ -0.25
LIMK1-202ENST00000418310 FAM84BQ96KN1 310 aaPredicted RBP13.48□□□□□ -0.25
LIMK1-202ENST00000418310 SLF1Q9BQI6 1058 aa13.48□□□□□ -0.25
LIMK1-202ENST00000418310 PARD6BQ9BYG5 372 aa13.48□□□□□ -0.25
LIMK1-202ENST00000418310 MYH2Q9UKX2 1941 aa13.48□□□□□ -0.25
LIMK1-202ENST00000418310 SHANK3Q9BYB0 1731 aa13.48□□□□□ -0.25
LIMK1-202ENST00000418310 GOLGA8HP0CJ92 632 aa13.48□□□□□ -0.25
LIMK1-202ENST00000418310 MCM6Q14566 821 aa13.48□□□□□ -0.25
LIMK1-202ENST00000418310 TRIM10Q9UDY6 481 aa13.48□□□□□ -0.25
LIMK1-202ENST00000418310 SRP68Q9UHB9 627 aaKnown RBP13.48□□□□□ -0.25
LIMK1-202ENST00000418310 COL4A1P02462 1669 aa13.48□□□□□ -0.25
LIMK1-202ENST00000418310 A0A1B0GTH6 734 aa13.48□□□□□ -0.25
LIMK1-202ENST00000418310 EFCAB8A8MWE9 144 aa13.48□□□□□ -0.25
LIMK1-202ENST00000418310 TXNRD3Q86VQ6 643 aa13.48□□□□□ -0.25
LIMK1-202ENST00000418310 STAG2Q8N3U4 1231 aa13.48□□□□□ -0.25
LIMK1-202ENST00000418310 SLC44A5Q8NCS7 719 aa13.48□□□□□ -0.25
LIMK1-202ENST00000418310 HINFPQ9BQA5 517 aa13.48□□□□□ -0.25
LIMK1-202ENST00000418310 SUGCTQ9HAC7 445 aa13.48□□□□□ -0.25
LIMK1-202ENST00000418310 MINPP1Q9UNW1 487 aa13.48□□□□□ -0.25
LIMK1-202ENST00000418310 COL1A1P02452 1464 aaPredicted RBP13.47□□□□□ -0.25
LIMK1-202ENST00000418310 BAZ2AQ9UIF9 1905 aaKnown RBP13.47□□□□□ -0.25
LIMK1-202ENST00000418310 FUT2Q10981 343 aa13.47□□□□□ -0.25
LIMK1-202ENST00000418310 TMTC3Q6ZXV5 915 aa13.47□□□□□ -0.25
LIMK1-202ENST00000418310 MRFAP1Q9Y605 127 aa13.47□□□□□ -0.25
LIMK1-202ENST00000418310 TAF1P21675 1872 aa13.47□□□□□ -0.25
LIMK1-202ENST00000418310 NUP98P52948 1817 aa13.47□□□□□ -0.25
LIMK1-202ENST00000418310 ECM29Q5VYK3 1845 aa13.47□□□□□ -0.25
LIMK1-202ENST00000418310 PAPPAQ13219 1627 aa13.47□□□□□ -0.25
LIMK1-202ENST00000418310 PPP1R3GB7ZBB8 358 aa13.47□□□□□ -0.25
LIMK1-202ENST00000418310 GYPCP04921 128 aa13.47□□□□□ -0.25
LIMK1-202ENST00000418310 KRT31Q15323 416 aa13.47□□□□□ -0.25
LIMK1-202ENST00000418310 SLC35F6Q8N357 371 aa13.47□□□□□ -0.25
LIMK1-202ENST00000418310 MARCH10Q8NA82 808 aaPredicted RBP13.47□□□□□ -0.25
LIMK1-202ENST00000418310 KIFC2Q96AC6 838 aa13.47□□□□□ -0.25
LIMK1-202ENST00000418310 ADD3Q9UEY8 706 aaKnown RBP13.47□□□□□ -0.25
LIMK1-202ENST00000418310 STX8Q9UNK0 236 aa13.47□□□□□ -0.25
LIMK1-202ENST00000418310 ADGRG1Q9Y653 693 aa13.47□□□□□ -0.25
LIMK1-202ENST00000418310 PRPF3O43395 683 aaKnown RBP13.46□□□□□ -0.25
LIMK1-202ENST00000418310 KIF5CO60282 957 aa13.46□□□□□ -0.25
LIMK1-202ENST00000418310 IL17AQ16552 155 aa13.46□□□□□ -0.25
LIMK1-202ENST00000418310 PARP10Q53GL7 1025 aa13.46□□□□□ -0.25
LIMK1-202ENST00000418310 NT5DC1Q5TFE4 455 aa13.46□□□□□ -0.25
LIMK1-202ENST00000418310 PTF1AQ7RTS3 328 aa13.46□□□□□ -0.25
LIMK1-202ENST00000418310 ZNF579Q8NAF0 562 aaKnown RBP13.46□□□□□ -0.25
LIMK1-202ENST00000418310 NELFBQ8WX92 580 aa13.46□□□□□ -0.25
LIMK1-202ENST00000418310 MTRQ99707 1265 aa13.46□□□□□ -0.25
LIMK1-202ENST00000418310 SAP30BPQ9UHR5 308 aaKnown RBP13.46□□□□□ -0.25
LIMK1-202ENST00000418310 FAM205AQ6ZU69 1335 aa13.46□□□□□ -0.25
LIMK1-202ENST00000418310 CNTNAP5Q8WYK1 1306 aa13.46□□□□□ -0.25
LIMK1-202ENST00000418310 USP17L3A6NCW0 530 aa13.46□□□□□ -0.25
LIMK1-202ENST00000418310 USP17L4A6NCW7 530 aa13.46□□□□□ -0.25
LIMK1-202ENST00000418310 OAS2P29728 719 aaKnown RBP13.46□□□□□ -0.25
LIMK1-202ENST00000418310 MAP3K9P80192 1104 aa13.46□□□□□ -0.25
LIMK1-202ENST00000418310 NPY5RQ15761 445 aa13.46□□□□□ -0.25
LIMK1-202ENST00000418310 USP17L1Q7RTZ2 530 aa13.46□□□□□ -0.25
LIMK1-202ENST00000418310 APTXQ7Z2E3 356 aaKnown RBP13.46□□□□□ -0.25
LIMK1-202ENST00000418310 VAT1LQ9HCJ6 419 aa13.46□□□□□ -0.25
LIMK1-202ENST00000418310 MYH3P11055 1940 aa13.46□□□□□ -0.26
LIMK1-202ENST00000418310 ENC1O14682 589 aa13.46□□□□□ -0.26
LIMK1-202ENST00000418310 MFAP3LO75121 409 aa13.46□□□□□ -0.26
LIMK1-202ENST00000418310 SCG2P13521 617 aa13.46□□□□□ -0.26
LIMK1-202ENST00000418310 ERCC5P28715 1186 aaPredicted RBP13.46□□□□□ -0.26
LIMK1-202ENST00000418310 ST5P78524 1137 aa13.46□□□□□ -0.26
LIMK1-202ENST00000418310 HEATR3Q7Z4Q2 680 aa13.46□□□□□ -0.26
LIMK1-202ENST00000418310 TRIML1Q8N9V2 468 aa13.46□□□□□ -0.26
LIMK1-202ENST00000418310 UIMC1Q96RL1 719 aa13.46□□□□□ -0.26
LIMK1-202ENST00000418310 DCP1AQ9NPI6 582 aaPredicted RBP13.46□□□□□ -0.26
LIMK1-202ENST00000418310 GUCA1BQ9UMX6 200 aa13.46□□□□□ -0.26
LIMK1-202ENST00000418310 PLEKHG2Q9H7P9 1386 aa13.46□□□□□ -0.26
LIMK1-202ENST00000418310 LRP6O75581 1613 aa13.45□□□□□ -0.26
LIMK1-202ENST00000418310 STAT6P42226 847 aa13.45□□□□□ -0.26
LIMK1-202ENST00000418310 TFAP4Q01664 338 aa13.45□□□□□ -0.26
LIMK1-202ENST00000418310 UBXN1Q04323 297 aa13.45□□□□□ -0.26
LIMK1-202ENST00000418310 DIXDC1Q155Q3 683 aa13.45□□□□□ -0.26
LIMK1-202ENST00000418310 CC2D1AQ6P1N0 951 aaPredicted RBP13.45□□□□□ -0.26
LIMK1-202ENST00000418310 IQUBQ8NA54 791 aa13.45□□□□□ -0.26
LIMK1-202ENST00000418310 CHP1Q99653 195 aa13.45□□□□□ -0.26
LIMK1-202ENST00000418310 TPM1P09493 284 aa13.45□□□□□ -0.26
LIMK1-202ENST00000418310 KRT9P35527 623 aa13.45□□□□□ -0.26
LIMK1-202ENST00000418310 USP5P45974 858 aa13.45□□□□□ -0.26
LIMK1-202ENST00000418310 CHMP4BP1P59074 171 aa13.45□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms