RNA–Protein interactions for RNA: ENST00000417440.2

CASP4-202, Transcript of caspase 4, humanhuman

TSL 3

Gene CASP4, Length 763 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASP4-202ENST00000417440 CCL14Q16627 93 aa8.85□□□□□ -0.99
CASP4-202ENST00000417440 Q3C1V9 767 aa8.85□□□□□ -0.99
CASP4-202ENST00000417440 TNNI3KQ59H18 835 aa8.85□□□□□ -0.99
CASP4-202ENST00000417440 POTEEQ6S8J3 1075 aa8.85□□□□□ -0.99
CASP4-202ENST00000417440 Q7L0L9 218 aa8.85□□□□□ -0.99
CASP4-202ENST00000417440 FOXP4Q8IVH2 680 aaPredicted RBP8.85□□□□□ -0.99
CASP4-202ENST00000417440 ANKLE1Q8NAG6 615 aa8.85□□□□□ -0.99
CASP4-202ENST00000417440 FEZ1Q99689 392 aa8.85□□□□□ -0.99
CASP4-202ENST00000417440 WDR18Q9BV38 432 aa8.85□□□□□ -0.99
CASP4-202ENST00000417440 SLC4A5Q9BY07 1137 aa8.85□□□□□ -0.99
CASP4-202ENST00000417440 C1orf115Q9H7X2 142 aa8.85□□□□□ -0.99
CASP4-202ENST00000417440 DNAJC18Q9H819 358 aa8.85□□□□□ -0.99
CASP4-202ENST00000417440 RBPJLQ9UBG7 517 aa8.85□□□□□ -0.99
CASP4-202ENST00000417440 MORF4L1Q9UBU8 362 aa8.85□□□□□ -0.99
CASP4-202ENST00000417440 FPGT-TNNI3KV9GXZ4 949 aa8.85□□□□□ -0.99
CASP4-202ENST00000417440 TRIM6-TRIM34B2RNG4 842 aa8.84□□□□□ -0.99
CASP4-202ENST00000417440 C19orf81C9J6K1 198 aa8.84□□□□□ -0.99
CASP4-202ENST00000417440 IDH1O75874 414 aaKnown RBP8.84□□□□□ -0.99
CASP4-202ENST00000417440 GH2P01242 217 aa8.84□□□□□ -0.99
CASP4-202ENST00000417440 CCND3P30281 292 aaPredicted RBP8.84□□□□□ -0.99
CASP4-202ENST00000417440 HOXA7P31268 230 aaPredicted RBP8.84□□□□□ -0.99
CASP4-202ENST00000417440 RANBP2P49792 3224 aaKnown RBP8.84□□□□□ -0.99
CASP4-202ENST00000417440 ERVK-9P63128 1117 aa8.84□□□□□ -0.99
CASP4-202ENST00000417440 ERVK-24P63145 666 aa8.84□□□□□ -0.99
CASP4-202ENST00000417440 CACNB2Q08289 660 aaPredicted RBP8.84□□□□□ -0.99
CASP4-202ENST00000417440 DOCK1Q14185 1865 aa8.84□□□□□ -0.99
CASP4-202ENST00000417440 TMEM132AQ24JP5 1023 aa8.84□□□□□ -0.99
CASP4-202ENST00000417440 ATF7IPQ6VMQ6 1270 aa8.84□□□□□ -0.99
CASP4-202ENST00000417440 METTL3Q86U44 580 aaKnown RBP8.84□□□□□ -0.99
CASP4-202ENST00000417440 TMEM57Q8N5G2 664 aa8.84□□□□□ -0.99
CASP4-202ENST00000417440 DEFB123Q8N688 67 aa8.84□□□□□ -0.99
CASP4-202ENST00000417440 MIGA1Q8NAN2 632 aa8.84□□□□□ -0.99
CASP4-202ENST00000417440 SOCS4Q8WXH5 440 aa8.84□□□□□ -0.99
CASP4-202ENST00000417440 GDF15Q99988 308 aa8.84□□□□□ -0.99
CASP4-202ENST00000417440 UBE2OQ9C0C9 1292 aaKnown RBP8.84□□□□□ -0.99
CASP4-202ENST00000417440 CCDC8Q9H0W5 538 aaPredicted RBP8.84□□□□□ -0.99
CASP4-202ENST00000417440 BCL11AQ9H165 835 aa8.84□□□□□ -0.99
CASP4-202ENST00000417440 PORCNQ9H237 461 aa8.84□□□□□ -0.99
CASP4-202ENST00000417440 PIH1D3Q9NQM4 214 aaKnown RBP8.84□□□□□ -0.99
CASP4-202ENST00000417440 OGDHLQ9ULD0 1010 aa8.84□□□□□ -0.99
CASP4-202ENST00000417440 ZBTB21Q9ULJ3 1066 aa8.84□□□□□ -0.99
CASP4-202ENST00000417440 TRIOBPQ9H2D6 2365 aa8.84□□□□□ -0.99
CASP4-202ENST00000417440 CNGA1P29973 690 aa8.83□□□□□ -1
CASP4-202ENST00000417440 MAPK4P31152 587 aa8.83□□□□□ -1
CASP4-202ENST00000417440 RGS2P41220 211 aa8.83□□□□□ -1
CASP4-202ENST00000417440 PPP4CP60510 307 aa8.83□□□□□ -1
CASP4-202ENST00000417440 MDM2Q00987 491 aaPredicted RBP8.83□□□□□ -1
CASP4-202ENST00000417440 RAB3GAP1Q15042 981 aa8.83□□□□□ -1
CASP4-202ENST00000417440 USP17L2Q6R6M4 530 aa8.83□□□□□ -1
CASP4-202ENST00000417440 GPR142Q7Z601 462 aa8.83□□□□□ -1
CASP4-202ENST00000417440 PLEKHH3Q7Z736 793 aa8.83□□□□□ -1
CASP4-202ENST00000417440 PHOX2BQ99453 314 aa8.83□□□□□ -1
CASP4-202ENST00000417440 ZBED2Q9BTP6 218 aa8.83□□□□□ -1
CASP4-202ENST00000417440 KDM4CQ9H3R0 1056 aa8.83□□□□□ -1
CASP4-202ENST00000417440 TLR7Q9NYK1 1049 aaKnown RBP8.83□□□□□ -1
CASP4-202ENST00000417440 MGAMO43451 1857 aa8.83□□□□□ -1
CASP4-202ENST00000417440 COL2A1P02458 1487 aaPredicted RBP8.83□□□□□ -1
CASP4-202ENST00000417440 PFASO15067 1338 aa8.82□□□□□ -1
CASP4-202ENST00000417440 POTEB3A0JP26 581 aa8.82□□□□□ -1
CASP4-202ENST00000417440 XRCC5P13010 732 aaKnown RBP8.82□□□□□ -1
CASP4-202ENST00000417440 BMP8BP34820 402 aa8.82□□□□□ -1
CASP4-202ENST00000417440 PSEN2P49810 448 aa8.82□□□□□ -1
CASP4-202ENST00000417440 ATP8B2P98198 1209 aa8.82□□□□□ -1
CASP4-202ENST00000417440 LRRC26Q2I0M4 334 aa8.82□□□□□ -1
CASP4-202ENST00000417440 MAP3K21Q5TCX8 1036 aa8.82□□□□□ -1
CASP4-202ENST00000417440 ZKSCAN2Q63HK3 967 aa8.82□□□□□ -1
CASP4-202ENST00000417440 POTEBQ6S5H4 581 aa8.82□□□□□ -1
CASP4-202ENST00000417440 PACS2Q86VP3 889 aa8.82□□□□□ -1
CASP4-202ENST00000417440 PARP9Q8IXQ6 854 aa8.82□□□□□ -1
CASP4-202ENST00000417440 TRMT44Q8IYL2 757 aaKnown RBP8.82□□□□□ -1
CASP4-202ENST00000417440 MAGEB6Q8N7X4 407 aa8.82□□□□□ -1
CASP4-202ENST00000417440 HS3ST6Q96QI5 342 aa8.82□□□□□ -1
CASP4-202ENST00000417440 TMUB1Q9BVT8 246 aa8.82□□□□□ -1
CASP4-202ENST00000417440 USP17L15C9J2P7 530 aa8.81□□□□□ -1
CASP4-202ENST00000417440 USP17L13C9JLJ4 530 aa8.81□□□□□ -1
CASP4-202ENST00000417440 USP17L11C9JVI0 530 aa8.81□□□□□ -1
CASP4-202ENST00000417440 USP17L18D6R9N7 530 aa8.81□□□□□ -1
CASP4-202ENST00000417440 USP17L22D6RA61 530 aa8.81□□□□□ -1
CASP4-202ENST00000417440 USP17L17D6RBQ6 530 aa8.81□□□□□ -1
CASP4-202ENST00000417440 USP17L19D6RCP7 530 aa8.81□□□□□ -1
CASP4-202ENST00000417440 USP17L20D6RJB6 530 aa8.81□□□□□ -1
CASP4-202ENST00000417440 GLRX3O76003 335 aaKnown RBP8.81□□□□□ -1
CASP4-202ENST00000417440 ATP2B2Q01814 1243 aa8.81□□□□□ -1
CASP4-202ENST00000417440 USP17L24Q0WX57 530 aa8.81□□□□□ -1
CASP4-202ENST00000417440 ABCB5Q2M3G0 1257 aa8.81□□□□□ -1
CASP4-202ENST00000417440 CERKLQ49MI3 558 aaPredicted RBP8.81□□□□□ -1
CASP4-202ENST00000417440 MORN1Q5T089 497 aa8.81□□□□□ -1
CASP4-202ENST00000417440 MFSD14CQ5VZR4 134 aa8.81□□□□□ -1
CASP4-202ENST00000417440 METTL16Q86W50 562 aaKnown RBP8.81□□□□□ -1
CASP4-202ENST00000417440 ITPRIPQ8IWB1 547 aa8.81□□□□□ -1
CASP4-202ENST00000417440 TDHQ8IZJ6 230 aa8.81□□□□□ -1
CASP4-202ENST00000417440 ACER1Q8TDN7 264 aa8.81□□□□□ -1
CASP4-202ENST00000417440 EDC3Q96F86 508 aaKnown RBP8.81□□□□□ -1
CASP4-202ENST00000417440 APBA2Q99767 749 aa8.81□□□□□ -1
CASP4-202ENST00000417440 SENP6Q9GZR1 1112 aaPredicted RBP8.81□□□□□ -1
CASP4-202ENST00000417440 ANTXR1Q9H6X2 564 aa8.81□□□□□ -1
CASP4-202ENST00000417440 GPR108Q9NPR9 543 aa8.81□□□□□ -1
CASP4-202ENST00000417440 FLRT1Q9NZU1 646 aa8.81□□□□□ -1
CASP4-202ENST00000417440 DBNLQ9UJU6 430 aaKnown RBP8.81□□□□□ -1
CASP4-202ENST00000417440 PHIPQ8WWQ0 1821 aa8.81□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms