RNA–Protein interactions for RNA: ENST00000417344.2

CCNT1-202, Transcript of cyclin T1, humanhuman

TSL 2

Gene CCNT1, Length 2,017 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNT1-202ENST00000417344 MTA1Q13330 715 aa7.18□□□□□ -1.26
CCNT1-202ENST00000417344 MIS18BP1Q6P0N0 1132 aa7.18□□□□□ -1.26
CCNT1-202ENST00000417344 CCNI2Q6ZMN8 369 aaPredicted RBP7.18□□□□□ -1.26
CCNT1-202ENST00000417344 BZW1Q7L1Q6 419 aaKnown RBP7.18□□□□□ -1.26
CCNT1-202ENST00000417344 RETREG3Q86VR2 466 aa7.18□□□□□ -1.26
CCNT1-202ENST00000417344 GSPT2Q8IYD1 628 aaKnown RBP7.18□□□□□ -1.26
CCNT1-202ENST00000417344 LINC00301Q8NCQ3 95 aa7.18□□□□□ -1.26
CCNT1-202ENST00000417344 RASSF8Q8NHQ8 419 aa7.18□□□□□ -1.26
CCNT1-202ENST00000417344 KCNG4Q8TDN1 519 aa7.18□□□□□ -1.26
CCNT1-202ENST00000417344 C19orf44Q9H6X5 657 aa7.18□□□□□ -1.26
CCNT1-202ENST00000417344 TTF2Q9UNY4 1162 aaKnown RBP7.18□□□□□ -1.26
CCNT1-202ENST00000417344 ZCCHC11Q5TAX3 1644 aaKnown RBP7.18□□□□□ -1.26
CCNT1-202ENST00000417344 NUTM2BA6NNL0 878 aaPredicted RBP7.18□□□□□ -1.26
CCNT1-202ENST00000417344 NUTM2EB1AL46 878 aaPredicted RBP7.18□□□□□ -1.26
CCNT1-202ENST00000417344 AHCYL1O43865 530 aa7.18□□□□□ -1.26
CCNT1-202ENST00000417344 RTN3O95197 1032 aaPredicted RBP7.18□□□□□ -1.26
CCNT1-202ENST00000417344 FESP07332 822 aa7.18□□□□□ -1.26
CCNT1-202ENST00000417344 PTPN5P54829 565 aa7.18□□□□□ -1.26
CCNT1-202ENST00000417344 STK38Q15208 465 aa7.18□□□□□ -1.26
CCNT1-202ENST00000417344 PUS10Q3MIT2 529 aaKnown RBP7.18□□□□□ -1.26
CCNT1-202ENST00000417344 ACCSLQ4AC99 568 aa7.18□□□□□ -1.26
CCNT1-202ENST00000417344 TTMPQ5BVD1 217 aa7.18□□□□□ -1.26
CCNT1-202ENST00000417344 THEMIS2Q5TEJ8 643 aa7.18□□□□□ -1.26
CCNT1-202ENST00000417344 NUTM2DQ5VT03 806 aaPredicted RBP7.18□□□□□ -1.26
CCNT1-202ENST00000417344 CCDC121Q6ZUS5 278 aa7.18□□□□□ -1.26
CCNT1-202ENST00000417344 NUTM2AQ8IVF1 878 aaPredicted RBP7.18□□□□□ -1.26
CCNT1-202ENST00000417344 HLA-CQ95604 372 aa7.18□□□□□ -1.26
CCNT1-202ENST00000417344 CCDC47Q96A33 483 aaKnown RBP7.18□□□□□ -1.26
CCNT1-202ENST00000417344 SPAG5Q96R06 1193 aa7.18□□□□□ -1.26
CCNT1-202ENST00000417344 HAUS2Q9NVX0 235 aa7.18□□□□□ -1.26
CCNT1-202ENST00000417344 HMG20BQ9P0W2 317 aa7.18□□□□□ -1.26
CCNT1-202ENST00000417344 FAM184BQ9ULE4 1060 aa7.18□□□□□ -1.26
CCNT1-202ENST00000417344 TAF6LQ9Y6J9 622 aa7.18□□□□□ -1.26
CCNT1-202ENST00000417344 ERICH2A1L162 156 aa7.17□□□□□ -1.26
CCNT1-202ENST00000417344 C6orf229H3BNL8 230 aa7.17□□□□□ -1.26
CCNT1-202ENST00000417344 MGRN1O60291 552 aa7.17□□□□□ -1.26
CCNT1-202ENST00000417344 SMNDC1O75940 238 aaKnown RBP eCLIP7.17□□□□□ -1.26
CCNT1-202ENST00000417344 NBPF7P0C2Y1 421 aaPredicted RBP7.17□□□□□ -1.26
CCNT1-202ENST00000417344 PFKFB1P16118 471 aa7.17□□□□□ -1.26
CCNT1-202ENST00000417344 FBLN1P23142 703 aa7.17□□□□□ -1.26
CCNT1-202ENST00000417344 GUCA2AQ02747 115 aa7.17□□□□□ -1.26
CCNT1-202ENST00000417344 QPCTQ16769 361 aa7.17□□□□□ -1.26
CCNT1-202ENST00000417344 C1QTNF12Q5T7M4 302 aa7.17□□□□□ -1.26
CCNT1-202ENST00000417344 NBPF14Q5TI25 921 aa7.17□□□□□ -1.26
CCNT1-202ENST00000417344 CCDC181Q5TID7 509 aa7.17□□□□□ -1.26
CCNT1-202ENST00000417344 NUTM2GQ5VZR2 741 aa7.17□□□□□ -1.26
CCNT1-202ENST00000417344 ARMC3Q5W041 872 aa7.17□□□□□ -1.26
CCNT1-202ENST00000417344 BLOC1S3Q6QNY0 202 aa7.17□□□□□ -1.26
CCNT1-202ENST00000417344 C6orf89Q6UWU4 347 aa7.17□□□□□ -1.26
CCNT1-202ENST00000417344 NFXL1Q6ZNB6 911 aa7.17□□□□□ -1.26
CCNT1-202ENST00000417344 TRAPPC11Q7Z392 1133 aa7.17□□□□□ -1.26
CCNT1-202ENST00000417344 NSUN7Q8NE18 718 aaKnown RBP7.17□□□□□ -1.26
CCNT1-202ENST00000417344 AENQ8WTP8 325 aaKnown RBP7.17□□□□□ -1.26
CCNT1-202ENST00000417344 NSMCE1Q8WV22 266 aa7.17□□□□□ -1.26
CCNT1-202ENST00000417344 EVI5LQ96CN4 794 aa7.17□□□□□ -1.26
CCNT1-202ENST00000417344 RPGRIP1Q96KN7 1286 aa7.17□□□□□ -1.26
CCNT1-202ENST00000417344 EBF2Q9HAK2 575 aa7.17□□□□□ -1.26
CCNT1-202ENST00000417344 SNRKQ9NRH2 765 aa7.17□□□□□ -1.26
CCNT1-202ENST00000417344 CHCHD3Q9NX63 227 aaKnown RBP7.17□□□□□ -1.26
CCNT1-202ENST00000417344 KDM6AO15550 1401 aaPredicted RBP7.17□□□□□ -1.26
CCNT1-202ENST00000417344 PTPDC1A2A3K4 754 aa7.17□□□□□ -1.26
CCNT1-202ENST00000417344 HIP1O00291 1037 aa7.17□□□□□ -1.26
CCNT1-202ENST00000417344 SPTLC2O15270 562 aa7.17□□□□□ -1.26
CCNT1-202ENST00000417344 BUB1BO60566 1050 aaPredicted RBP7.17□□□□□ -1.26
CCNT1-202ENST00000417344 PPFIA2O75334 1257 aa7.17□□□□□ -1.26
CCNT1-202ENST00000417344 FMNL1O95466 1100 aaPredicted RBP7.17□□□□□ -1.26
CCNT1-202ENST00000417344 YEATS4O95619 227 aa7.17□□□□□ -1.26
CCNT1-202ENST00000417344 PYGLP06737 847 aa7.17□□□□□ -1.26
CCNT1-202ENST00000417344 UBTFL1P0CB47 393 aaPredicted RBP7.17□□□□□ -1.26
CCNT1-202ENST00000417344 PDE6BP35913 854 aa7.17□□□□□ -1.26
CCNT1-202ENST00000417344 ATP1A2P50993 1020 aa7.17□□□□□ -1.26
CCNT1-202ENST00000417344 HDLBPQ00341 1268 aaKnown RBP7.17□□□□□ -1.26
CCNT1-202ENST00000417344 NMIQ13287 307 aaPredicted RBP7.17□□□□□ -1.26
CCNT1-202ENST00000417344 KRT32Q14532 448 aa7.17□□□□□ -1.26
CCNT1-202ENST00000417344 PTGISQ16647 500 aa7.17□□□□□ -1.26
CCNT1-202ENST00000417344 HSP90AA4PQ58FG1 418 aa7.17□□□□□ -1.26
CCNT1-202ENST00000417344 SPECC1Q5M775 1068 aa7.17□□□□□ -1.26
CCNT1-202ENST00000417344 SLC30A9Q6PML9 568 aa7.17□□□□□ -1.26
CCNT1-202ENST00000417344 KDM7AQ6ZMT4 941 aa7.17□□□□□ -1.26
CCNT1-202ENST00000417344 Q6ZUG5 572 aa7.17□□□□□ -1.26
CCNT1-202ENST00000417344 SND1Q7KZF4 910 aaKnown RBP eCLIP7.17□□□□□ -1.26
CCNT1-202ENST00000417344 PPP1R42Q7Z4L9 355 aa7.17□□□□□ -1.26
CCNT1-202ENST00000417344 HDGFL2Q7Z4V5 671 aaPredicted RBP7.17□□□□□ -1.26
CCNT1-202ENST00000417344 ANKRD23Q86SG2 305 aa7.17□□□□□ -1.26
CCNT1-202ENST00000417344 NLRP14Q86W24 1093 aa7.17□□□□□ -1.26
CCNT1-202ENST00000417344 SCUBE3Q8IX30 993 aa7.17□□□□□ -1.26
CCNT1-202ENST00000417344 MYCBPAPQ8TBZ2 947 aa7.17□□□□□ -1.26
CCNT1-202ENST00000417344 FAM227BQ96M60 508 aa7.17□□□□□ -1.26
CCNT1-202ENST00000417344 CCT8L2Q96SF2 557 aa7.17□□□□□ -1.26
CCNT1-202ENST00000417344 OSBPL9Q96SU4 736 aa7.17□□□□□ -1.26
CCNT1-202ENST00000417344 RUFY1Q96T51 708 aa7.17□□□□□ -1.26
CCNT1-202ENST00000417344 MMS19Q96T76 1030 aa7.17□□□□□ -1.26
CCNT1-202ENST00000417344 YIPF3Q9GZM5 350 aa7.17□□□□□ -1.26
CCNT1-202ENST00000417344 HOOK1Q9UJC3 728 aaKnown RBP7.17□□□□□ -1.26
CCNT1-202ENST00000417344 CORO1CQ9ULV4 474 aaPredicted RBP7.17□□□□□ -1.26
CCNT1-202ENST00000417344 WDR3Q9UNX4 943 aaKnown RBP eCLIP7.17□□□□□ -1.26
CCNT1-202ENST00000417344 RIPOR2Q9Y4F9 1068 aa7.17□□□□□ -1.26
CCNT1-202ENST00000417344 LMTK2Q8IWU2 1503 aa7.16□□□□□ -1.26
CCNT1-202ENST00000417344 CEMIPQ8WUJ3 1361 aa7.16□□□□□ -1.26
CCNT1-202ENST00000417344 KIF3BO15066 747 aa7.16□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms