RNA–Protein interactions for RNA: ENST00000417157.2

SLC13A3-205, Transcript of solute carrier family 13 member 3, humanhuman

TSL 1 (best) BASIC

Gene SLC13A3, Length 876 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC13A3-205ENST00000417157 NYAP2Q9P242 653 aa16.87■□□□□ 0.29
SLC13A3-205ENST00000417157 ANAPC4Q9UJX5 808 aa16.87■□□□□ 0.29
SLC13A3-205ENST00000417157 RABGAP1Q9Y3P9 1069 aa16.87■□□□□ 0.29
SLC13A3-205ENST00000417157 PLIN4Q96Q06 1357 aa16.87■□□□□ 0.29
SLC13A3-205ENST00000417157 FOXP2O15409 715 aa16.86■□□□□ 0.29
SLC13A3-205ENST00000417157 PRDM1O75626 825 aa16.86■□□□□ 0.29
SLC13A3-205ENST00000417157 NEFLP07196 543 aa16.86■□□□□ 0.29
SLC13A3-205ENST00000417157 PRKCZQ05513 592 aa16.86■□□□□ 0.29
SLC13A3-205ENST00000417157 ZNF589Q86UQ0 364 aaPredicted RBP16.86■□□□□ 0.29
SLC13A3-205ENST00000417157 CLEC10AQ8IUN9 316 aa16.86■□□□□ 0.29
SLC13A3-205ENST00000417157 PAGR1Q9BTK6 254 aa16.86■□□□□ 0.29
SLC13A3-205ENST00000417157 HOXC10Q9NYD6 342 aa16.86■□□□□ 0.29
SLC13A3-205ENST00000417157 RAD50Q92878 1312 aa16.86■□□□□ 0.29
SLC13A3-205ENST00000417157 PCP11498 1178 aaKnown RBP16.85■□□□□ 0.29
SLC13A3-205ENST00000417157 MAPK4P31152 587 aa16.85■□□□□ 0.29
SLC13A3-205ENST00000417157 ERVK-9P63128 1117 aa16.85■□□□□ 0.29
SLC13A3-205ENST00000417157 ERVK-24P63145 666 aa16.85■□□□□ 0.29
SLC13A3-205ENST00000417157 COG2Q14746 738 aa16.85■□□□□ 0.29
SLC13A3-205ENST00000417157 SIAH1Q8IUQ4 282 aa16.85■□□□□ 0.29
SLC13A3-205ENST00000417157 SLAIN1Q8ND83 568 aa16.85■□□□□ 0.29
SLC13A3-205ENST00000417157 NEDD1Q8NHV4 660 aa16.85■□□□□ 0.29
SLC13A3-205ENST00000417157 RUFY2Q8WXA3 655 aa16.85■□□□□ 0.29
SLC13A3-205ENST00000417157 CWC22Q9HCG8 908 aaKnown RBP16.85■□□□□ 0.29
SLC13A3-205ENST00000417157 IGKV6D-41A0A0C4DH26 115 aa16.84■□□□□ 0.29
SLC13A3-205ENST00000417157 TSPY2A6NKD2 308 aa16.84■□□□□ 0.29
SLC13A3-205ENST00000417157 SPDYE16A6NNV3 312 aaPredicted RBP16.84■□□□□ 0.29
SLC13A3-205ENST00000417157 RAD21O60216 631 aa16.84■□□□□ 0.29
SLC13A3-205ENST00000417157 TTLL1O95922 423 aa16.84■□□□□ 0.29
SLC13A3-205ENST00000417157 FGAP02671 866 aa16.84■□□□□ 0.29
SLC13A3-205ENST00000417157 GSPT1P15170 499 aaKnown RBP16.84■□□□□ 0.29
SLC13A3-205ENST00000417157 GRK4P32298 578 aa16.84■□□□□ 0.29
SLC13A3-205ENST00000417157 NT5C2P49902 561 aa16.84■□□□□ 0.29
SLC13A3-205ENST00000417157 IRF5Q13568 498 aa16.84■□□□□ 0.29
SLC13A3-205ENST00000417157 SPICE1Q8N0Z3 855 aa16.84■□□□□ 0.29
SLC13A3-205ENST00000417157 MB21D1Q8N884 522 aa16.84■□□□□ 0.29
SLC13A3-205ENST00000417157 SOCS4Q8WXH5 440 aa16.84■□□□□ 0.29
SLC13A3-205ENST00000417157 ZNF333Q96JL9 665 aa16.84■□□□□ 0.29
SLC13A3-205ENST00000417157 GNL3Q9BVP2 549 aaKnown RBP eCLIP16.84■□□□□ 0.29
SLC13A3-205ENST00000417157 RNF41Q9H4P4 317 aaPredicted RBP16.84■□□□□ 0.29
SLC13A3-205ENST00000417157 RBPJLQ9UBG7 517 aa16.84■□□□□ 0.29
SLC13A3-205ENST00000417157 DDX52Q9Y2R4 599 aaKnown RBP eCLIP16.84■□□□□ 0.29
SLC13A3-205ENST00000417157 GREB1LQ9C091 1923 aaPredicted RBP16.84■□□□□ 0.29
SLC13A3-205ENST00000417157 ZSWIM8A7E2V4 1837 aa16.83■□□□□ 0.28
SLC13A3-205ENST00000417157 ORC4O43929 436 aa16.83■□□□□ 0.28
SLC13A3-205ENST00000417157 FLOT1O75955 427 aa16.83■□□□□ 0.28
SLC13A3-205ENST00000417157 FLT3LGP49771 235 aa16.83■□□□□ 0.28
SLC13A3-205ENST00000417157 SOX10P56693 466 aa16.83■□□□□ 0.28
SLC13A3-205ENST00000417157 UBXN2AP68543 259 aa16.83■□□□□ 0.28
SLC13A3-205ENST00000417157 TFAP4Q01664 338 aa16.83■□□□□ 0.28
SLC13A3-205ENST00000417157 CTDSPL2Q05D32 466 aa16.83■□□□□ 0.28
SLC13A3-205ENST00000417157 PXYLP1Q8TE99 480 aa16.83■□□□□ 0.28
SLC13A3-205ENST00000417157 CEP95Q96GE4 821 aa16.83■□□□□ 0.28
SLC13A3-205ENST00000417157 DSCC1Q9BVC3 393 aa16.83■□□□□ 0.28
SLC13A3-205ENST00000417157 TMEM106CQ9BVX2 250 aa16.83■□□□□ 0.28
SLC13A3-205ENST00000417157 TXNRD2Q9NNW7 524 aa16.83■□□□□ 0.28
SLC13A3-205ENST00000417157 TOMM22Q9NS69 142 aa16.83■□□□□ 0.28
SLC13A3-205ENST00000417157 MTMR4Q9NYA4 1195 aa16.83■□□□□ 0.28
SLC13A3-205ENST00000417157 RGS19P49795 217 aa16.82■□□□□ 0.28
SLC13A3-205ENST00000417157 CLIP2Q9UDT6 1046 aa16.82■□□□□ 0.28
SLC13A3-205ENST00000417157 CTNNA3Q9UI47 895 aa16.82■□□□□ 0.28
SLC13A3-205ENST00000417157 ZNF213O14771 459 aa16.81■□□□□ 0.28
SLC13A3-205ENST00000417157 RANBP6O60518 1105 aaKnown RBP16.81■□□□□ 0.28
SLC13A3-205ENST00000417157 CENPBP07199 599 aaPredicted RBP16.81■□□□□ 0.28
SLC13A3-205ENST00000417157 FGRP09769 529 aa16.81■□□□□ 0.28
SLC13A3-205ENST00000417157 DSG3P32926 999 aa16.81■□□□□ 0.28
SLC13A3-205ENST00000417157 FAM47AQ5JRC9 791 aa16.81■□□□□ 0.28
SLC13A3-205ENST00000417157 GMCL1P1Q8NEA9 526 aa16.81■□□□□ 0.28
SLC13A3-205ENST00000417157 SH3TC2Q8TF17 1288 aa16.81■□□□□ 0.28
SLC13A3-205ENST00000417157 MKL1Q969V6 931 aa16.81■□□□□ 0.28
SLC13A3-205ENST00000417157 NUDT12Q9BQG2 462 aa16.81■□□□□ 0.28
SLC13A3-205ENST00000417157 BIN2Q9UBW5 565 aaPredicted RBP16.81■□□□□ 0.28
SLC13A3-205ENST00000417157 GABRQQ9UN88 632 aa16.81■□□□□ 0.28
SLC13A3-205ENST00000417157 MGAMO43451 1857 aa16.8■□□□□ 0.28
SLC13A3-205ENST00000417157 F5H6K3 240 aa16.8■□□□□ 0.28
SLC13A3-205ENST00000417157 ADCY3O60266 1144 aa16.8■□□□□ 0.28
SLC13A3-205ENST00000417157 MLLT1Q03111 559 aaPredicted RBP16.8■□□□□ 0.28
SLC13A3-205ENST00000417157 KLRC3Q07444 240 aa16.8■□□□□ 0.28
SLC13A3-205ENST00000417157 IMMTQ16891 758 aaKnown RBP16.8■□□□□ 0.28
SLC13A3-205ENST00000417157 KIAA1755Q5JYT7 1200 aa16.8■□□□□ 0.28
SLC13A3-205ENST00000417157 MFSD6Q6ZSS7 791 aa16.8■□□□□ 0.28
SLC13A3-205ENST00000417157 GPR142Q7Z601 462 aa16.8■□□□□ 0.28
SLC13A3-205ENST00000417157 PLEKHH3Q7Z736 793 aa16.8■□□□□ 0.28
SLC13A3-205ENST00000417157 STAG1Q8WVM7 1258 aa16.8■□□□□ 0.28
SLC13A3-205ENST00000417157 CCDC136Q96JN2 1154 aa16.8■□□□□ 0.28
SLC13A3-205ENST00000417157 STX8Q9UNK0 236 aa16.8■□□□□ 0.28
SLC13A3-205ENST00000417157 IVNS1ABPQ9Y6Y0 642 aa16.8■□□□□ 0.28
SLC13A3-205ENST00000417157 CNMDO75829 334 aa16.79■□□□□ 0.28
SLC13A3-205ENST00000417157 HAND2P61296 217 aa16.79■□□□□ 0.28
SLC13A3-205ENST00000417157 Q3C1V9 767 aa16.79■□□□□ 0.28
SLC13A3-205ENST00000417157 RRP12Q5JTH9 1297 aaKnown RBP16.79■□□□□ 0.28
SLC13A3-205ENST00000417157 FAM83BQ5T0W9 1011 aa16.79■□□□□ 0.28
SLC13A3-205ENST00000417157 AKNAD1Q5T1N1 836 aa16.79■□□□□ 0.28
SLC13A3-205ENST00000417157 TRMT44Q8IYL2 757 aaKnown RBP16.79■□□□□ 0.28
SLC13A3-205ENST00000417157 NDUFB10O96000 172 aa16.78■□□□□ 0.28
SLC13A3-205ENST00000417157 CHMLP26374 656 aa16.78■□□□□ 0.28
SLC13A3-205ENST00000417157 RGS2P41220 211 aa16.78■□□□□ 0.28
SLC13A3-205ENST00000417157 WDR78Q5VTH9 848 aa16.78■□□□□ 0.28
SLC13A3-205ENST00000417157 LRRC47Q8N1G4 583 aaKnown RBP16.78■□□□□ 0.28
SLC13A3-205ENST00000417157 SHCBP1Q8NEM2 672 aa16.78■□□□□ 0.28
SLC13A3-205ENST00000417157 ESR2Q92731 530 aa16.78■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms