RNA–Protein interactions for RNA: ENST00000416688.5

CTDSPL-203, Transcript of CTD small phosphatase like, humanhuman

TSL 3

Gene CTDSPL, Length 368 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL-203ENST00000416688 G3BP1Q13283 466 aaKnown RBP eCLIP3.65□□□□□ -1.83
CTDSPL-203ENST00000416688 TRIM14Q14142 442 aa3.65□□□□□ -1.83
CTDSPL-203ENST00000416688 CBX2Q14781 532 aaPredicted RBP3.65□□□□□ -1.83
CTDSPL-203ENST00000416688 GRM3Q14832 879 aa3.65□□□□□ -1.83
CTDSPL-203ENST00000416688 CCNG2Q16589 344 aa3.65□□□□□ -1.83
CTDSPL-203ENST00000416688 KMT5BQ4FZB7 885 aa3.65□□□□□ -1.83
CTDSPL-203ENST00000416688 SEZ6Q53EL9 994 aa3.65□□□□□ -1.83
CTDSPL-203ENST00000416688 AGAP9Q5VTM2 703 aa3.65□□□□□ -1.83
CTDSPL-203ENST00000416688 KIAA1614Q5VZ46 1190 aa3.65□□□□□ -1.83
CTDSPL-203ENST00000416688 RETSATQ6NUM9 610 aa3.65□□□□□ -1.83
CTDSPL-203ENST00000416688 XRRA1Q6P2D8 792 aa3.65□□□□□ -1.83
CTDSPL-203ENST00000416688 BRICD5Q6PL45 260 aa3.65□□□□□ -1.83
CTDSPL-203ENST00000416688 TMCO3Q6UWJ1 677 aa3.65□□□□□ -1.83
CTDSPL-203ENST00000416688 NFXL1Q6ZNB6 911 aa3.65□□□□□ -1.83
CTDSPL-203ENST00000416688 CCDC129Q6ZRS4 1044 aa3.65□□□□□ -1.83
CTDSPL-203ENST00000416688 FAM196AQ6ZSG2 479 aa3.65□□□□□ -1.83
CTDSPL-203ENST00000416688 SV2BQ7L1I2 683 aa3.65□□□□□ -1.83
CTDSPL-203ENST00000416688 FASTKD5Q7L8L6 764 aaKnown RBP3.65□□□□□ -1.83
CTDSPL-203ENST00000416688 FAM178BQ8IXR5 827 aa3.65□□□□□ -1.83
CTDSPL-203ENST00000416688 TAB3Q8N5C8 712 aaPredicted RBP3.65□□□□□ -1.83
CTDSPL-203ENST00000416688 ZNF713Q8N859 430 aaPredicted RBP3.65□□□□□ -1.83
CTDSPL-203ENST00000416688 C19orf47Q8N9M1 422 aaKnown RBP3.65□□□□□ -1.83
CTDSPL-203ENST00000416688 MSANTD4Q8NCY6 345 aa3.65□□□□□ -1.83
CTDSPL-203ENST00000416688 SNX29Q8TEQ0 813 aa3.65□□□□□ -1.83
CTDSPL-203ENST00000416688 CENPTQ96BT3 561 aa3.65□□□□□ -1.83
CTDSPL-203ENST00000416688 RHOVQ96L33 236 aa3.65□□□□□ -1.83
CTDSPL-203ENST00000416688 ZMAT2Q96NC0 199 aaKnown RBP3.65□□□□□ -1.83
CTDSPL-203ENST00000416688 SEC62Q99442 399 aaKnown RBP3.65□□□□□ -1.83
CTDSPL-203ENST00000416688 CDC6Q99741 560 aa3.65□□□□□ -1.83
CTDSPL-203ENST00000416688 FAM167BQ9BTA0 163 aa3.65□□□□□ -1.83
CTDSPL-203ENST00000416688 DHRS4Q9BTZ2 278 aa3.65□□□□□ -1.83
CTDSPL-203ENST00000416688 SLC26A6Q9BXS9 759 aa3.65□□□□□ -1.83
CTDSPL-203ENST00000416688 SLC4A5Q9BY07 1137 aa3.65□□□□□ -1.83
CTDSPL-203ENST00000416688 SLC13A1Q9BZW2 595 aa3.65□□□□□ -1.83
CTDSPL-203ENST00000416688 MYLK2Q9H1R3 596 aa3.65□□□□□ -1.83
CTDSPL-203ENST00000416688 DEF6Q9H4E7 631 aa3.65□□□□□ -1.83
CTDSPL-203ENST00000416688 IFT22Q9H7X7 185 aa3.65□□□□□ -1.83
CTDSPL-203ENST00000416688 PRKRIP1Q9H875 184 aaPredicted RBP3.65□□□□□ -1.83
CTDSPL-203ENST00000416688 ARFGAP3Q9NP61 516 aa3.65□□□□□ -1.83
CTDSPL-203ENST00000416688 SMYD2Q9NRG4 433 aa3.65□□□□□ -1.83
CTDSPL-203ENST00000416688 BLOC1S4Q9NUP1 217 aa3.65□□□□□ -1.83
CTDSPL-203ENST00000416688 PDP2Q9P2J9 529 aa3.65□□□□□ -1.83
CTDSPL-203ENST00000416688 PPARGC1AQ9UBK2 798 aaKnown RBP3.65□□□□□ -1.83
CTDSPL-203ENST00000416688 LRFN2Q9ULH4 789 aa3.65□□□□□ -1.83
CTDSPL-203ENST00000416688 TRAK1Q9UPV9 953 aa3.65□□□□□ -1.83
CTDSPL-203ENST00000416688 SMC3Q9UQE7 1217 aa3.65□□□□□ -1.83
CTDSPL-203ENST00000416688 TMX2Q9Y320 296 aa3.65□□□□□ -1.83
CTDSPL-203ENST00000416688 RRP7AQ9Y3A4 280 aaKnown RBP3.65□□□□□ -1.83
CTDSPL-203ENST00000416688 TRIM75PA6NK02 468 aa3.64□□□□□ -1.83
CTDSPL-203ENST00000416688 TMEM229AB2RXF0 380 aa3.64□□□□□ -1.83
CTDSPL-203ENST00000416688 F6X3S4 739 aa3.64□□□□□ -1.83
CTDSPL-203ENST00000416688 AGRPO00253 132 aa3.64□□□□□ -1.83
CTDSPL-203ENST00000416688 IPO5O00410 1097 aaKnown RBP3.64□□□□□ -1.83
CTDSPL-203ENST00000416688 PPEF1O14829 653 aaPredicted RBP3.64□□□□□ -1.83
CTDSPL-203ENST00000416688 ZPR1O75312 459 aa3.64□□□□□ -1.83
CTDSPL-203ENST00000416688 DDX58O95786 925 aaKnown RBP3.64□□□□□ -1.83
CTDSPL-203ENST00000416688 PF4P02776 101 aa3.64□□□□□ -1.83
CTDSPL-203ENST00000416688 CCNYL3P0C7X3 344 aa3.64□□□□□ -1.83
CTDSPL-203ENST00000416688 PYGMP11217 842 aa3.64□□□□□ -1.83
CTDSPL-203ENST00000416688 HSPA6P17066 643 aa3.64□□□□□ -1.83
CTDSPL-203ENST00000416688 JUNDP17535 347 aa3.64□□□□□ -1.83
CTDSPL-203ENST00000416688 MX2P20592 715 aa3.64□□□□□ -1.83
CTDSPL-203ENST00000416688 KRT9P35527 623 aa3.64□□□□□ -1.83
CTDSPL-203ENST00000416688 IRS1P35568 1242 aa3.64□□□□□ -1.83
CTDSPL-203ENST00000416688 ATP6V1E1P36543 226 aa3.64□□□□□ -1.83
CTDSPL-203ENST00000416688 GDF10P55107 478 aa3.64□□□□□ -1.83
CTDSPL-203ENST00000416688 CAMK2GQ13555 558 aaPredicted RBP3.64□□□□□ -1.83
CTDSPL-203ENST00000416688 SLMAPQ14BN4 828 aa3.64□□□□□ -1.83
CTDSPL-203ENST00000416688 DDB1Q16531 1140 aa3.64□□□□□ -1.83
CTDSPL-203ENST00000416688 CWF19L2Q2TBE0 894 aaKnown RBP3.64□□□□□ -1.83
CTDSPL-203ENST00000416688 PARP10Q53GL7 1025 aa3.64□□□□□ -1.83
CTDSPL-203ENST00000416688 TMEM240Q5SV17 173 aa3.64□□□□□ -1.83
CTDSPL-203ENST00000416688 SWT1Q5T5J6 900 aaKnown RBP3.64□□□□□ -1.83
CTDSPL-203ENST00000416688 MFSD4BQ5TF39 518 aa3.64□□□□□ -1.83
CTDSPL-203ENST00000416688 ANKRD45Q5TZF3 282 aa3.64□□□□□ -1.83
CTDSPL-203ENST00000416688 ITPRIPL1Q6GPH6 555 aa3.64□□□□□ -1.83
CTDSPL-203ENST00000416688 ZNF449Q6P9G9 518 aa3.64□□□□□ -1.83
CTDSPL-203ENST00000416688 IGF2-ASQ6U949 168 aa3.64□□□□□ -1.83
CTDSPL-203ENST00000416688 C6orf15Q6UXA7 325 aaPredicted RBP3.64□□□□□ -1.83
CTDSPL-203ENST00000416688 EPM2AIP1Q7L775 607 aaPredicted RBP3.64□□□□□ -1.83
CTDSPL-203ENST00000416688 SRGAP1Q7Z6B7 1085 aa3.64□□□□□ -1.83
CTDSPL-203ENST00000416688 GALNT5Q7Z7M9 940 aa3.64□□□□□ -1.83
CTDSPL-203ENST00000416688 SDCCAG8Q86SQ7 713 aaPredicted RBP3.64□□□□□ -1.83
CTDSPL-203ENST00000416688 C7orf61Q8IZ16 206 aa3.64□□□□□ -1.83
CTDSPL-203ENST00000416688 SAMD14Q8IZD0 417 aaPredicted RBP3.64□□□□□ -1.83
CTDSPL-203ENST00000416688 REXO1Q8N1G1 1221 aaKnown RBP3.64□□□□□ -1.83
CTDSPL-203ENST00000416688 FAM43AQ8N2R8 423 aa3.64□□□□□ -1.83
CTDSPL-203ENST00000416688 CPA6Q8N4T0 437 aa3.64□□□□□ -1.83
CTDSPL-203ENST00000416688 FAM26EQ8N5C1 309 aa3.64□□□□□ -1.83
CTDSPL-203ENST00000416688 LSMEM1Q8N8F7 131 aa3.64□□□□□ -1.83
CTDSPL-203ENST00000416688 RBBP8NLQ8NC74 664 aaPredicted RBP3.64□□□□□ -1.83
CTDSPL-203ENST00000416688 PHC3Q8NDX5 983 aa3.64□□□□□ -1.83
CTDSPL-203ENST00000416688 GPR152Q8TDT2 470 aa3.64□□□□□ -1.83
CTDSPL-203ENST00000416688 ANKRD24Q8TF21 1146 aa3.64□□□□□ -1.83
CTDSPL-203ENST00000416688 SLC10A4Q96EP9 437 aa3.64□□□□□ -1.83
CTDSPL-203ENST00000416688 IFT43Q96FT9 208 aa3.64□□□□□ -1.83
CTDSPL-203ENST00000416688 HIC2Q96JB3 615 aa3.64□□□□□ -1.83
CTDSPL-203ENST00000416688 CCDC138Q96M89 665 aa3.64□□□□□ -1.83
CTDSPL-203ENST00000416688 NELL2Q99435 816 aa3.64□□□□□ -1.83
CTDSPL-203ENST00000416688 NUP88Q99567 741 aaPredicted RBP3.64□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms