RNA–Protein interactions for RNA: ENST00000416093.1

RAF1-202, Transcript of Raf-1 proto-oncogene, serine/threonine kinase, humanhuman

TSL 2

Gene RAF1, Length 962 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAF1-202ENST00000416093 USP17L22D6RA61 530 aa17.81■□□□□ 0.44
RAF1-202ENST00000416093 USP17L17D6RBQ6 530 aa17.81■□□□□ 0.44
RAF1-202ENST00000416093 USP17L19D6RCP7 530 aa17.81■□□□□ 0.44
RAF1-202ENST00000416093 USP17L20D6RJB6 530 aa17.81■□□□□ 0.44
RAF1-202ENST00000416093 MPHOSPH10O00566 681 aaKnown RBP17.81■□□□□ 0.44
RAF1-202ENST00000416093 SGPL1O95470 568 aa17.81■□□□□ 0.44
RAF1-202ENST00000416093 USP14P54578 494 aa17.81■□□□□ 0.44
RAF1-202ENST00000416093 MFAP1P55081 439 aaKnown RBP17.81■□□□□ 0.44
RAF1-202ENST00000416093 ERVK-9P63128 1117 aa17.81■□□□□ 0.44
RAF1-202ENST00000416093 ERVK-24P63145 666 aa17.81■□□□□ 0.44
RAF1-202ENST00000416093 USP17L24Q0WX57 530 aa17.81■□□□□ 0.44
RAF1-202ENST00000416093 SBK1Q52WX2 424 aa17.81■□□□□ 0.44
RAF1-202ENST00000416093 UBE2Q1Q7Z7E8 422 aa17.81■□□□□ 0.44
RAF1-202ENST00000416093 ZNF589Q86UQ0 364 aaPredicted RBP17.81■□□□□ 0.44
RAF1-202ENST00000416093 CCDC171Q6TFL3 1326 aa17.8■□□□□ 0.44
RAF1-202ENST00000416093 MINDY4BA8MYZ0 360 aa17.8■□□□□ 0.44
RAF1-202ENST00000416093 CHMLP26374 656 aa17.8■□□□□ 0.44
RAF1-202ENST00000416093 TRIM32Q13049 653 aa17.8■□□□□ 0.44
RAF1-202ENST00000416093 VPS53Q5VIR6 699 aa17.8■□□□□ 0.44
RAF1-202ENST00000416093 CATSPERGQ6ZRH7 1159 aa17.8■□□□□ 0.44
RAF1-202ENST00000416093 DEFB118Q96PH6 123 aa17.8■□□□□ 0.44
RAF1-202ENST00000416093 NAPBQ9H115 298 aa17.8■□□□□ 0.44
RAF1-202ENST00000416093 PORCNQ9H237 461 aa17.8■□□□□ 0.44
RAF1-202ENST00000416093 BAZ2AQ9UIF9 1905 aaKnown RBP17.8■□□□□ 0.44
RAF1-202ENST00000416093 A0A1W2PRG0 241 aa17.79■□□□□ 0.44
RAF1-202ENST00000416093 CNMDO75829 334 aa17.79■□□□□ 0.44
RAF1-202ENST00000416093 TFRCP02786 760 aaKnown RBP17.79■□□□□ 0.44
RAF1-202ENST00000416093 VCAM1P19320 739 aa17.79■□□□□ 0.44
RAF1-202ENST00000416093 CYP2B6P20813 491 aa17.79■□□□□ 0.44
RAF1-202ENST00000416093 BMP2KLQ5H9B9 411 aa17.79■□□□□ 0.44
RAF1-202ENST00000416093 GTF3C2Q8WUA4 911 aaPredicted RBP17.79■□□□□ 0.44
RAF1-202ENST00000416093 SWAP70Q9UH65 585 aa17.79■□□□□ 0.44
RAF1-202ENST00000416093 PLXNB2O15031 1838 aa17.79■□□□□ 0.44
RAF1-202ENST00000416093 FOXP2O15409 715 aa17.78■□□□□ 0.44
RAF1-202ENST00000416093 HSPD1P10809 573 aaKnown RBP17.78■□□□□ 0.44
RAF1-202ENST00000416093 MAPK4P31152 587 aa17.78■□□□□ 0.44
RAF1-202ENST00000416093 RUFY2Q8WXA3 655 aa17.78■□□□□ 0.44
RAF1-202ENST00000416093 NUDT12Q9BQG2 462 aa17.78■□□□□ 0.44
RAF1-202ENST00000416093 RPAP3Q9H6T3 665 aaPredicted RBP17.78■□□□□ 0.44
RAF1-202ENST00000416093 PAK6Q9NQU5 681 aaPredicted RBP17.78■□□□□ 0.44
RAF1-202ENST00000416093 RABGAP1Q9Y3P9 1069 aa17.78■□□□□ 0.44
RAF1-202ENST00000416093 FARP2O94887 1054 aaPredicted RBP17.77■□□□□ 0.44
RAF1-202ENST00000416093 HMGCRP04035 888 aa17.77■□□□□ 0.44
RAF1-202ENST00000416093 AKR1B1P15121 316 aa17.77■□□□□ 0.44
RAF1-202ENST00000416093 CDK8P49336 464 aa17.77■□□□□ 0.44
RAF1-202ENST00000416093 ALX1Q15699 326 aa17.77■□□□□ 0.44
RAF1-202ENST00000416093 C16orf86Q6ZW13 317 aa17.77■□□□□ 0.44
RAF1-202ENST00000416093 GPR142Q7Z601 462 aa17.77■□□□□ 0.44
RAF1-202ENST00000416093 CLEC10AQ8IUN9 316 aa17.77■□□□□ 0.44
RAF1-202ENST00000416093 SIAH1Q8IUQ4 282 aa17.77■□□□□ 0.44
RAF1-202ENST00000416093 CCAR1Q8IX12 1150 aaKnown RBP17.77■□□□□ 0.44
RAF1-202ENST00000416093 STK11IPQ8N1F8 1099 aa17.77■□□□□ 0.44
RAF1-202ENST00000416093 TRIB2Q92519 343 aa17.77■□□□□ 0.44
RAF1-202ENST00000416093 USP6NLQ92738 828 aa17.77■□□□□ 0.44
RAF1-202ENST00000416093 DPF3Q92784 378 aa17.77■□□□□ 0.44
RAF1-202ENST00000416093 XRN2Q9H0D6 950 aaKnown RBP eCLIP17.77■□□□□ 0.441e-8■■■□□ 15.3
RAF1-202ENST00000416093 H0YGN5 161 aa17.76■□□□□ 0.43
RAF1-202ENST00000416093 FGAP02671 866 aa17.76■□□□□ 0.43
RAF1-202ENST00000416093 KIAA1755Q5JYT7 1200 aa17.76■□□□□ 0.43
RAF1-202ENST00000416093 MORN1Q5T089 497 aa17.76■□□□□ 0.43
RAF1-202ENST00000416093 TMEM179Q6ZVK1 233 aa17.76■□□□□ 0.43
RAF1-202ENST00000416093 PLEKHH3Q7Z736 793 aa17.76■□□□□ 0.43
RAF1-202ENST00000416093 CRISPLD2Q9H0B8 497 aa17.76■□□□□ 0.43
RAF1-202ENST00000416093 BTBD7Q9P203 1132 aa17.76■□□□□ 0.43
RAF1-202ENST00000416093 PPARAQ07869 468 aa17.75■□□□□ 0.43
RAF1-202ENST00000416093 HABP4Q5JVS0 413 aaKnown RBP17.75■□□□□ 0.43
RAF1-202ENST00000416093 SOCS4Q8WXH5 440 aa17.75■□□□□ 0.43
RAF1-202ENST00000416093 IL25Q9H293 177 aa17.75■□□□□ 0.43
RAF1-202ENST00000416093 HMX1Q9NP08 348 aaPredicted RBP17.75■□□□□ 0.43
RAF1-202ENST00000416093 RPTORQ8N122 1335 aa17.74■□□□□ 0.43
RAF1-202ENST00000416093 RAD50Q92878 1312 aa17.74■□□□□ 0.43
RAF1-202ENST00000416093 SPDYE16A6NNV3 312 aaPredicted RBP17.74■□□□□ 0.43
RAF1-202ENST00000416093 SLC3A2P08195 630 aaKnown RBP17.74■□□□□ 0.43
RAF1-202ENST00000416093 XRCC5P13010 732 aaKnown RBP17.74■□□□□ 0.43
RAF1-202ENST00000416093 CCL14Q16627 93 aa17.74■□□□□ 0.43
RAF1-202ENST00000416093 LBX2Q6XYB7 198 aa17.74■□□□□ 0.43
RAF1-202ENST00000416093 CCDC17Q96LX7 622 aa17.74■□□□□ 0.43
RAF1-202ENST00000416093 MKNK2Q9HBH9 465 aa17.74■□□□□ 0.43
RAF1-202ENST00000416093 CWC22Q9HCG8 908 aaKnown RBP17.74■□□□□ 0.43
RAF1-202ENST00000416093 SGSM2O43147 1006 aa17.73■□□□□ 0.43
RAF1-202ENST00000416093 MAP3K21Q5TCX8 1036 aa17.73■□□□□ 0.43
RAF1-202ENST00000416093 HTATIP2Q9BUP3 242 aa17.73■□□□□ 0.43
RAF1-202ENST00000416093 DSCC1Q9BVC3 393 aa17.73■□□□□ 0.43
RAF1-202ENST00000416093 ZNF287Q9HBT7 754 aa17.73■□□□□ 0.43
RAF1-202ENST00000416093 COLQQ9Y215 455 aaPredicted RBP17.73■□□□□ 0.43
RAF1-202ENST00000416093 TMX2Q9Y320 296 aa17.73■□□□□ 0.43
RAF1-202ENST00000416093 ROBO3Q96MS0 1386 aa17.73■□□□□ 0.43
RAF1-202ENST00000416093 ZMYM6O95789 1325 aa17.72■□□□□ 0.43
RAF1-202ENST00000416093 CAPN2P17655 700 aa17.72■□□□□ 0.43
RAF1-202ENST00000416093 PTPREP23469 700 aa17.72■□□□□ 0.43
RAF1-202ENST00000416093 RGS2P41220 211 aa17.72■□□□□ 0.43
RAF1-202ENST00000416093 CCNA1P78396 465 aa17.72■□□□□ 0.43
RAF1-202ENST00000416093 ICA1Q05084 483 aa17.72■□□□□ 0.43
RAF1-202ENST00000416093 CTDSPL2Q05D32 466 aa17.72■□□□□ 0.43
RAF1-202ENST00000416093 PDE4BQ07343 736 aa17.72■□□□□ 0.43
RAF1-202ENST00000416093 MAP2K5Q13163 448 aa17.72■□□□□ 0.43
RAF1-202ENST00000416093 COG2Q14746 738 aa17.72■□□□□ 0.43
RAF1-202ENST00000416093 WDR78Q5VTH9 848 aa17.72■□□□□ 0.43
RAF1-202ENST00000416093 DIS3LQ8TF46 1054 aaKnown RBP17.72■□□□□ 0.43
RAF1-202ENST00000416093 PAWRQ96IZ0 340 aaKnown RBP17.72■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms