RNA–Protein interactions for RNA: ENST00000415948.5

CRAT-203, Transcript of carnitine O-acetyltransferase, humanhuman

TSL 5

Gene CRAT, Length 800 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRAT-203ENST00000415948 MKL1Q969V6 931 aa18.21■□□□□ 0.51
CRAT-203ENST00000415948 FEZ1Q99689 392 aa18.21■□□□□ 0.51
CRAT-203ENST00000415948 TMEM47Q9BQJ4 181 aa18.21■□□□□ 0.51
CRAT-203ENST00000415948 TBC1D2Q9BYX2 928 aa18.21■□□□□ 0.51
CRAT-203ENST00000415948 AGTPBP1Q9UPW5 1226 aa18.21■□□□□ 0.51
CRAT-203ENST00000415948 TTLL1O95922 423 aa18.2■□□□□ 0.5
CRAT-203ENST00000415948 SREBF2Q12772 1141 aa18.2■□□□□ 0.5
CRAT-203ENST00000415948 USP17L2Q6R6M4 530 aa18.2■□□□□ 0.5
CRAT-203ENST00000415948 ANKRD23Q86SG2 305 aa18.2■□□□□ 0.5
CRAT-203ENST00000415948 PROCA1Q8NCQ7 364 aaPredicted RBP18.2■□□□□ 0.5
CRAT-203ENST00000415948 NCOA7Q8NI08 942 aa18.2■□□□□ 0.5
CRAT-203ENST00000415948 ZSCAN10Q96SZ4 725 aaPredicted RBP18.2■□□□□ 0.5
CRAT-203ENST00000415948 KRT23Q9C075 422 aa18.2■□□□□ 0.5
CRAT-203ENST00000415948 STX8Q9UNK0 236 aa18.2■□□□□ 0.5
CRAT-203ENST00000415948 PDHXO00330 501 aa18.19■□□□□ 0.5
CRAT-203ENST00000415948 FOXN1O15353 648 aa18.19■□□□□ 0.5
CRAT-203ENST00000415948 TRPA1O75762 1119 aa18.19■□□□□ 0.5
CRAT-203ENST00000415948 TBC1D8O95759 1140 aa18.19■□□□□ 0.5
CRAT-203ENST00000415948 HSPA1AP0DMV8 641 aaKnown RBP18.19■□□□□ 0.5
CRAT-203ENST00000415948 HSPA1BP0DMV9 641 aaKnown RBP18.19■□□□□ 0.5
CRAT-203ENST00000415948 CRHR2Q13324 411 aa18.19■□□□□ 0.5
CRAT-203ENST00000415948 RPAP3Q9H6T3 665 aaPredicted RBP18.19■□□□□ 0.5
CRAT-203ENST00000415948 CNNM2Q9H8M5 875 aa18.19■□□□□ 0.5
CRAT-203ENST00000415948 ARHGEF10LQ9HCE6 1279 aa18.19■□□□□ 0.5
CRAT-203ENST00000415948 FBXO28Q9NVF7 368 aa18.19■□□□□ 0.5
CRAT-203ENST00000415948 C19orf81C9J6K1 198 aa18.18■□□□□ 0.5
CRAT-203ENST00000415948 F5H6K3 240 aa18.18■□□□□ 0.5
CRAT-203ENST00000415948 PRC1O43663 620 aa18.18■□□□□ 0.5
CRAT-203ENST00000415948 EXOSC10Q01780 885 aaKnown RBP18.18■□□□□ 0.5
CRAT-203ENST00000415948 KLRC3Q07444 240 aa18.18■□□□□ 0.5
CRAT-203ENST00000415948 IGDCC4Q8TDY8 1250 aa18.18■□□□□ 0.5
CRAT-203ENST00000415948 JAKMIP1Q96N16 626 aaKnown RBP18.18■□□□□ 0.5
CRAT-203ENST00000415948 EPB41L2O43491 1005 aaKnown RBP18.17■□□□□ 0.5
CRAT-203ENST00000415948 FAM83BQ5T0W9 1011 aa18.17■□□□□ 0.5
CRAT-203ENST00000415948 ANKS1AQ92625 1134 aa18.17■□□□□ 0.5
CRAT-203ENST00000415948 ASCC2Q9H1I8 757 aaPredicted RBP18.17■□□□□ 0.5
CRAT-203ENST00000415948 LY9Q9HBG7 655 aa18.17■□□□□ 0.5
CRAT-203ENST00000415948 MTMR7Q9Y216 660 aa18.17■□□□□ 0.5
CRAT-203ENST00000415948 MGAMO43451 1857 aa18.17■□□□□ 0.5
CRAT-203ENST00000415948 CASP8AP2Q9UKL3 1982 aa18.17■□□□□ 0.5
CRAT-203ENST00000415948 SH2B2O14492 632 aaPredicted RBP18.16■□□□□ 0.5
CRAT-203ENST00000415948 TAF1CQ15572 869 aaPredicted RBP18.16■□□□□ 0.5
CRAT-203ENST00000415948 RNF20Q5VTR2 975 aa18.16■□□□□ 0.5
CRAT-203ENST00000415948 FASTKD5Q7L8L6 764 aaKnown RBP18.16■□□□□ 0.5
CRAT-203ENST00000415948 RALYLQ86SE5 291 aaKnown RBP18.16■□□□□ 0.5
CRAT-203ENST00000415948 GMCL1P1Q8NEA9 526 aa18.16■□□□□ 0.5
CRAT-203ENST00000415948 NEK1Q96PY6 1258 aa18.16■□□□□ 0.5
CRAT-203ENST00000415948 KIF2CQ99661 725 aa18.16■□□□□ 0.5
CRAT-203ENST00000415948 TMOD4Q9NZQ9 345 aa18.16■□□□□ 0.5
CRAT-203ENST00000415948 SMCHD1A6NHR9 2005 aa18.16■□□□□ 0.5
CRAT-203ENST00000415948 RAD21O60216 631 aa18.15■□□□□ 0.5
CRAT-203ENST00000415948 CNMDO75829 334 aa18.15■□□□□ 0.5
CRAT-203ENST00000415948 HSPA8P11142 646 aaKnown RBP18.15■□□□□ 0.5
CRAT-203ENST00000415948 TOP1P11387 765 aaKnown RBP18.15■□□□□ 0.5
CRAT-203ENST00000415948 HOXA7P31268 230 aaPredicted RBP18.15■□□□□ 0.5
CRAT-203ENST00000415948 USP14P54578 494 aa18.15■□□□□ 0.5
CRAT-203ENST00000415948 INHBEP58166 350 aa18.15■□□□□ 0.5
CRAT-203ENST00000415948 SLC35G1Q2M3R5 365 aa18.15■□□□□ 0.5
CRAT-203ENST00000415948 SLFN13Q68D06 897 aa18.15■□□□□ 0.5
CRAT-203ENST00000415948 CATSPERGQ6ZRH7 1159 aa18.15■□□□□ 0.5
CRAT-203ENST00000415948 IL17RAQ96F46 866 aa18.15■□□□□ 0.5
CRAT-203ENST00000415948 P2RX7Q99572 595 aaKnown RBP18.15■□□□□ 0.5
CRAT-203ENST00000415948 MYL10Q9BUA6 226 aa18.15■□□□□ 0.5
CRAT-203ENST00000415948 BACH2Q9BYV9 841 aa18.15■□□□□ 0.5
CRAT-203ENST00000415948 CPVLQ9H3G5 476 aa18.15■□□□□ 0.5
CRAT-203ENST00000415948 TXNRD2Q9NNW7 524 aa18.15■□□□□ 0.5
CRAT-203ENST00000415948 PLXNB2O15031 1838 aa18.14■□□□□ 0.5
CRAT-203ENST00000415948 SPDYE16A6NNV3 312 aaPredicted RBP18.14■□□□□ 0.49
CRAT-203ENST00000415948 IFIT3O14879 490 aaKnown RBP18.14■□□□□ 0.49
CRAT-203ENST00000415948 CA12O43570 354 aa18.14■□□□□ 0.49
CRAT-203ENST00000415948 SNHG28P0DPA3 235 aa18.14■□□□□ 0.49
CRAT-203ENST00000415948 PDHBP11177 359 aa18.14■□□□□ 0.49
CRAT-203ENST00000415948 MCCP23508 829 aa18.14■□□□□ 0.49
CRAT-203ENST00000415948 CTGFP29279 349 aa18.14■□□□□ 0.49
CRAT-203ENST00000415948 MAP2K1Q02750 393 aaPredicted RBP18.14■□□□□ 0.49
CRAT-203ENST00000415948 TRDNQ13061 729 aa18.14■□□□□ 0.49
CRAT-203ENST00000415948 TTBK2Q6IQ55 1244 aa18.14■□□□□ 0.49
CRAT-203ENST00000415948 KCTD1Q719H9 257 aa18.14■□□□□ 0.49
CRAT-203ENST00000415948 IQCA1Q86XH1 822 aa18.14■□□□□ 0.49
CRAT-203ENST00000415948 DGKHQ86XP1 1220 aa18.14■□□□□ 0.49
CRAT-203ENST00000415948 RAB11FIP4Q86YS3 637 aa18.14■□□□□ 0.49
CRAT-203ENST00000415948 CFHR5Q9BXR6 569 aa18.14■□□□□ 0.49
CRAT-203ENST00000415948 UPF3BQ9BZI7 483 aaKnown RBP18.14■□□□□ 0.49
CRAT-203ENST00000415948 CPA4Q9UI42 421 aa18.14■□□□□ 0.49
CRAT-203ENST00000415948 SLC45A1Q9Y2W3 748 aa18.14■□□□□ 0.49
CRAT-203ENST00000415948 FRMPD2Q68DX3 1309 aaPredicted RBP18.14■□□□□ 0.49
CRAT-203ENST00000415948 WDR46O15213 610 aaKnown RBP18.13■□□□□ 0.49
CRAT-203ENST00000415948 BCRP11274 1271 aa18.13■□□□□ 0.49
CRAT-203ENST00000415948 TAL1P17542 331 aaPredicted RBP18.13■□□□□ 0.49
CRAT-203ENST00000415948 CASTP20810 708 aaKnown RBP18.13■□□□□ 0.49
CRAT-203ENST00000415948 MCM5P33992 734 aa18.13■□□□□ 0.49
CRAT-203ENST00000415948 TMEM67Q5HYA8 995 aa18.13■□□□□ 0.49
CRAT-203ENST00000415948 REM2Q8IYK8 340 aaPredicted RBP18.13■□□□□ 0.49
CRAT-203ENST00000415948 PNMA1Q8ND90 353 aa18.13■□□□□ 0.49
CRAT-203ENST00000415948 LPAR1Q92633 364 aa18.13■□□□□ 0.49
CRAT-203ENST00000415948 UBAC1Q9BSL1 405 aa18.13■□□□□ 0.49
CRAT-203ENST00000415948 TANGO6Q9C0B7 1094 aa18.13■□□□□ 0.49
CRAT-203ENST00000415948 SH2D4AQ9H788 454 aa18.13■□□□□ 0.49
CRAT-203ENST00000415948 GOPCQ9HD26 462 aa18.13■□□□□ 0.49
CRAT-203ENST00000415948 ZCCHC17Q9NP64 241 aaKnown RBP18.13■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms