RNA–Protein interactions for RNA: ENST00000415357.1

LINC01090-201, Transcript of long intergenic non-protein coding RNA 1090, humanhuman

TSL 3 BASIC

Gene LINC01090, Length 881 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01090-201ENST00000415357 EHD4Q9H223 541 aa11.57□□□□□ -0.56
LINC01090-201ENST00000415357 EFCC1Q9HA90 598 aa11.57□□□□□ -0.56
LINC01090-201ENST00000415357 MCM9Q9NXL9 1143 aa11.57□□□□□ -0.56
LINC01090-201ENST00000415357 VPS9D1Q9Y2B5 631 aa11.57□□□□□ -0.56
LINC01090-201ENST00000415357 TTC41PQ6P2S7 1318 aa11.57□□□□□ -0.56
LINC01090-201ENST00000415357 CYP2D7A0A087X1C5 515 aa11.56□□□□□ -0.56
LINC01090-201ENST00000415357 TRIM6-TRIM34B2RNG4 842 aa11.56□□□□□ -0.56
LINC01090-201ENST00000415357 GH2P01242 217 aa11.56□□□□□ -0.56
LINC01090-201ENST00000415357 ASNSP08243 561 aa11.56□□□□□ -0.56
LINC01090-201ENST00000415357 CTGFP29279 349 aa11.56□□□□□ -0.56
LINC01090-201ENST00000415357 SHMT1P34896 483 aa11.56□□□□□ -0.56
LINC01090-201ENST00000415357 SOX10P56693 466 aa11.56□□□□□ -0.56
LINC01090-201ENST00000415357 MTMR2Q13614 643 aa11.56□□□□□ -0.56
LINC01090-201ENST00000415357 ZSCAN25Q6NSZ9 544 aa11.56□□□□□ -0.56
LINC01090-201ENST00000415357 TATDN1Q6P1N9 297 aa11.56□□□□□ -0.56
LINC01090-201ENST00000415357 SLC44A5Q8NCS7 719 aa11.56□□□□□ -0.56
LINC01090-201ENST00000415357 GCC1Q96CN9 775 aa11.56□□□□□ -0.56
LINC01090-201ENST00000415357 DYNLL2Q96FJ2 89 aa11.56□□□□□ -0.56
LINC01090-201ENST00000415357 AS3MTQ9HBK9 375 aa11.56□□□□□ -0.56
LINC01090-201ENST00000415357 AGTPBP1Q9UPW5 1226 aa11.56□□□□□ -0.56
LINC01090-201ENST00000415357 BAZ2AQ9UIF9 1905 aaKnown RBP11.56□□□□□ -0.56
LINC01090-201ENST00000415357 M0R2C6 588 aa11.55□□□□□ -0.56
LINC01090-201ENST00000415357 TK2O00142 265 aa11.55□□□□□ -0.56
LINC01090-201ENST00000415357 ERC2O15083 957 aa11.55□□□□□ -0.56
LINC01090-201ENST00000415357 GLRX3O76003 335 aaKnown RBP11.55□□□□□ -0.56
LINC01090-201ENST00000415357 IGHDP01880 384 aa11.55□□□□□ -0.56
LINC01090-201ENST00000415357 LACTBP83111 547 aaPredicted RBP11.55□□□□□ -0.56
LINC01090-201ENST00000415357 GABPAQ06546 454 aa11.55□□□□□ -0.56
LINC01090-201ENST00000415357 CERKLQ49MI3 558 aaPredicted RBP11.55□□□□□ -0.56
LINC01090-201ENST00000415357 B4GALNT3Q6L9W6 998 aa11.55□□□□□ -0.56
LINC01090-201ENST00000415357 OSBP2Q969R2 916 aa11.55□□□□□ -0.56
LINC01090-201ENST00000415357 WDR18Q9BV38 432 aa11.55□□□□□ -0.56
LINC01090-201ENST00000415357 LNPKQ9C0E8 428 aa11.55□□□□□ -0.56
LINC01090-201ENST00000415357 PTPN22Q9Y2R2 807 aa11.55□□□□□ -0.56
LINC01090-201ENST00000415357 SLC4A4Q9Y6R1 1079 aa11.55□□□□□ -0.56
LINC01090-201ENST00000415357 RNF113AO15541 343 aaKnown RBP11.54□□□□□ -0.56
LINC01090-201ENST00000415357 BCRP11274 1271 aa11.54□□□□□ -0.56
LINC01090-201ENST00000415357 BACE1P56817 501 aa11.54□□□□□ -0.56
LINC01090-201ENST00000415357 HIC1Q14526 733 aa11.54□□□□□ -0.56
LINC01090-201ENST00000415357 RAB3GAP1Q15042 981 aa11.54□□□□□ -0.56
LINC01090-201ENST00000415357 ZYXQ15942 572 aaKnown RBP11.54□□□□□ -0.56
LINC01090-201ENST00000415357 ABCB5Q2M3G0 1257 aa11.54□□□□□ -0.56
LINC01090-201ENST00000415357 SH3D19Q5HYK7 790 aa11.54□□□□□ -0.56
LINC01090-201ENST00000415357 PROCA1Q8NCQ7 364 aaPredicted RBP11.54□□□□□ -0.56
LINC01090-201ENST00000415357 APPBP2Q92624 585 aa11.54□□□□□ -0.56
LINC01090-201ENST00000415357 SEC62Q99442 399 aaKnown RBP11.54□□□□□ -0.56
LINC01090-201ENST00000415357 FSD1Q9BTV5 496 aa11.54□□□□□ -0.56
LINC01090-201ENST00000415357 SLC4A5Q9BY07 1137 aa11.54□□□□□ -0.56
LINC01090-201ENST00000415357 TBC1D2Q9BYX2 928 aa11.54□□□□□ -0.56
LINC01090-201ENST00000415357 ATP8A2Q9NTI2 1148 aa11.54□□□□□ -0.56
LINC01090-201ENST00000415357 PTCH2Q9Y6C5 1203 aa11.54□□□□□ -0.56
LINC01090-201ENST00000415357 USP17L12C9JPN9 530 aa11.53□□□□□ -0.56
LINC01090-201ENST00000415357 USP17L21D6R901 530 aa11.53□□□□□ -0.56
LINC01090-201ENST00000415357 GPAA1O43292 621 aa11.53□□□□□ -0.56
LINC01090-201ENST00000415357 GUCY1A2P33402 732 aa11.53□□□□□ -0.56
LINC01090-201ENST00000415357 PSMC4P43686 418 aa11.53□□□□□ -0.56
LINC01090-201ENST00000415357 AAMPQ13685 434 aa11.53□□□□□ -0.56
LINC01090-201ENST00000415357 KIF22Q14807 665 aa11.53□□□□□ -0.56
LINC01090-201ENST00000415357 SMC5Q8IY18 1101 aa11.53□□□□□ -0.56
LINC01090-201ENST00000415357 ACER1Q8TDN7 264 aa11.53□□□□□ -0.56
LINC01090-201ENST00000415357 SMCR8Q8TEV9 937 aaPredicted RBP11.53□□□□□ -0.56
LINC01090-201ENST00000415357 TRIM47Q96LD4 638 aa11.53□□□□□ -0.56
LINC01090-201ENST00000415357 STRBPQ96SI9 672 aaKnown RBP11.53□□□□□ -0.56
LINC01090-201ENST00000415357 RWDD1Q9H446 243 aaPredicted RBP11.53□□□□□ -0.56
LINC01090-201ENST00000415357 GINM1Q9NU53 330 aa11.53□□□□□ -0.56
LINC01090-201ENST00000415357 SLC45A1Q9Y2W3 748 aa11.53□□□□□ -0.56
LINC01090-201ENST00000415357 USP17L10C9JJH3 530 aa11.52□□□□□ -0.57
LINC01090-201ENST00000415357 MPHOSPH10O00566 681 aaKnown RBP11.52□□□□□ -0.57
LINC01090-201ENST00000415357 PDE1AP54750 535 aa11.52□□□□□ -0.57
LINC01090-201ENST00000415357 SEPT2Q15019 361 aa11.52□□□□□ -0.57
LINC01090-201ENST00000415357 C12orf60Q5U649 245 aa11.52□□□□□ -0.57
LINC01090-201ENST00000415357 CTR9Q6PD62 1173 aa11.52□□□□□ -0.57
LINC01090-201ENST00000415357 CLEC10AQ8IUN9 316 aa11.52□□□□□ -0.57
LINC01090-201ENST00000415357 STK11IPQ8N1F8 1099 aa11.52□□□□□ -0.57
LINC01090-201ENST00000415357 FEZ1Q99689 392 aa11.52□□□□□ -0.57
LINC01090-201ENST00000415357 ASCC2Q9H1I8 757 aaPredicted RBP11.52□□□□□ -0.57
LINC01090-201ENST00000415357 EPB41L4AQ9HCS5 686 aaPredicted RBP11.52□□□□□ -0.57
LINC01090-201ENST00000415357 CABP5Q9NP86 173 aa11.52□□□□□ -0.57
LINC01090-201ENST00000415357 TMOD4Q9NZQ9 345 aa11.52□□□□□ -0.57
LINC01090-201ENST00000415357 KIAA1468Q9P260 1216 aa11.52□□□□□ -0.57
LINC01090-201ENST00000415357 RBM27Q9P2N5 1060 aaKnown RBP11.52□□□□□ -0.57
LINC01090-201ENST00000415357 STAP2Q9UGK3 403 aa11.52□□□□□ -0.57
LINC01090-201ENST00000415357 BRCA2P51587 3418 aa11.52□□□□□ -0.57
LINC01090-201ENST00000415357 GSG1L2A8MUP6 293 aa11.51□□□□□ -0.57
LINC01090-201ENST00000415357 PEX10O60683 326 aa11.51□□□□□ -0.57
LINC01090-201ENST00000415357 FMNL1O95466 1100 aaPredicted RBP11.51□□□□□ -0.57
LINC01090-201ENST00000415357 ZFYP08048 801 aaPredicted RBP11.51□□□□□ -0.57
LINC01090-201ENST00000415357 AKR1B1P15121 316 aa11.51□□□□□ -0.57
LINC01090-201ENST00000415357 FECHP22830 423 aa11.51□□□□□ -0.57
LINC01090-201ENST00000415357 ARHGEF6Q15052 776 aa11.51□□□□□ -0.57
LINC01090-201ENST00000415357 ANKRD13CQ8N6S4 541 aa11.51□□□□□ -0.57
LINC01090-201ENST00000415357 DDRGK1Q96HY6 314 aa11.51□□□□□ -0.57
LINC01090-201ENST00000415357 PNMA3Q9UL41 463 aa11.51□□□□□ -0.57
LINC01090-201ENST00000415357 MYH8P13535 1937 aa11.5□□□□□ -0.57
LINC01090-201ENST00000415357 A0A1W2PRG0 241 aa11.5□□□□□ -0.57
LINC01090-201ENST00000415357 C19orf81C9J6K1 198 aa11.5□□□□□ -0.57
LINC01090-201ENST00000415357 MYCP01106 439 aaPredicted RBP11.5□□□□□ -0.57
LINC01090-201ENST00000415357 CDK8P49336 464 aa11.5□□□□□ -0.57
LINC01090-201ENST00000415357 IRX3P78415 501 aaPredicted RBP11.5□□□□□ -0.57
LINC01090-201ENST00000415357 PRKCZQ05513 592 aa11.5□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms