RNA–Protein interactions for RNA: ENST00000415298.5

AP1S3-205, Transcript of adaptor related protein complex 1 subunit sigma 3, humanhuman

TSL 1 (best)

Gene AP1S3, Length 2,515 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S3-205ENST00000415298 E4F1Q66K89 784 aaPredicted RBP23.06■■□□□ 1.28
AP1S3-205ENST00000415298 SPATA21Q7Z572 469 aa23.06■■□□□ 1.28
AP1S3-205ENST00000415298 MAB21L3Q8N8X9 362 aa23.06■■□□□ 1.28
AP1S3-205ENST00000415298 LPIN2Q92539 896 aa23.06■■□□□ 1.28
AP1S3-205ENST00000415298 EZH1Q92800 747 aaPredicted RBP23.06■■□□□ 1.28
AP1S3-205ENST00000415298 PRPF40BQ6NWY9 871 aaKnown RBP23.05■■□□□ 1.28
AP1S3-205ENST00000415298 HNRNPLLQ8WVV9 542 aaKnown RBP23.05■■□□□ 1.28
AP1S3-205ENST00000415298 SLX4Q8IY92 1834 aa23.05■■□□□ 1.28
AP1S3-205ENST00000415298 FILIP1LQ4L180 1135 aa23.05■■□□□ 1.28
AP1S3-205ENST00000415298 SARM1Q6SZW1 724 aa23.05■■□□□ 1.28
AP1S3-205ENST00000415298 TBC1D5Q92609 795 aa23.05■■□□□ 1.28
AP1S3-205ENST00000415298 N4BP1O75113 896 aaKnown RBP23.04■■□□□ 1.28
AP1S3-205ENST00000415298 MAP3K9P80192 1104 aa23.04■■□□□ 1.28
AP1S3-205ENST00000415298 STYK1Q6J9G0 422 aa23.04■■□□□ 1.28
AP1S3-205ENST00000415298 TXNRD3Q86VQ6 643 aa23.04■■□□□ 1.28
AP1S3-205ENST00000415298 EDC3Q96F86 508 aaKnown RBP23.04■■□□□ 1.28
AP1S3-205ENST00000415298 LZTS2Q9BRK4 669 aa23.04■■□□□ 1.28
AP1S3-205ENST00000415298 A0A1B0GUL6 1792 aa23.04■■□□□ 1.28
AP1S3-205ENST00000415298 FSBPO95073 299 aa23.04■■□□□ 1.28
AP1S3-205ENST00000415298 VPS53Q5VIR6 699 aa23.04■■□□□ 1.28
AP1S3-205ENST00000415298 SPON1Q9HCB6 807 aa23.04■■□□□ 1.28
AP1S3-205ENST00000415298 BATF3Q9NR55 127 aa23.04■■□□□ 1.28
AP1S3-205ENST00000415298 MYO1FO00160 1098 aa23.03■■□□□ 1.28
AP1S3-205ENST00000415298 EPB41L2O43491 1005 aaKnown RBP23.03■■□□□ 1.28
AP1S3-205ENST00000415298 SDSP20132 328 aa23.03■■□□□ 1.28
AP1S3-205ENST00000415298 BCAMP50895 628 aa23.03■■□□□ 1.28
AP1S3-205ENST00000415298 GNL2Q13823 731 aaKnown RBP23.03■■□□□ 1.28
AP1S3-205ENST00000415298 RSRC2Q7L4I2 434 aaKnown RBP23.03■■□□□ 1.28
AP1S3-205ENST00000415298 ATP6V0A2Q9Y487 856 aa23.03■■□□□ 1.28
AP1S3-205ENST00000415298 RBM47A0AV96 593 aaKnown RBP23.03■■□□□ 1.28
AP1S3-205ENST00000415298 PAX3P23760 479 aa23.03■■□□□ 1.28
AP1S3-205ENST00000415298 PHKA1P46020 1223 aa23.03■■□□□ 1.28
AP1S3-205ENST00000415298 KCNJ6P48051 423 aa23.03■■□□□ 1.28
AP1S3-205ENST00000415298 SCARF1Q14162 830 aa23.03■■□□□ 1.28
AP1S3-205ENST00000415298 MFSD4BQ5TF39 518 aa23.03■■□□□ 1.28
AP1S3-205ENST00000415298 OR8K1Q8NGG5 319 aa23.03■■□□□ 1.28
AP1S3-205ENST00000415298 FAM204AQ9H8W3 233 aa23.03■■□□□ 1.28
AP1S3-205ENST00000415298 G3BP2Q9UN86 482 aaKnown RBP23.03■■□□□ 1.28
AP1S3-205ENST00000415298 ATXN2Q99700 1313 aaKnown RBP23.02■■□□□ 1.28
AP1S3-205ENST00000415298 ENO4A6NNW6 628 aa23.02■■□□□ 1.28
AP1S3-205ENST00000415298 URI1O94763 535 aaPredicted RBP23.02■■□□□ 1.28
AP1S3-205ENST00000415298 GYG1P46976 350 aa23.02■■□□□ 1.28
AP1S3-205ENST00000415298 CCT5P48643 541 aa23.02■■□□□ 1.28
AP1S3-205ENST00000415298 LAMB3Q13751 1172 aa23.02■■□□□ 1.28
AP1S3-205ENST00000415298 RASA3Q14644 834 aa23.02■■□□□ 1.28
AP1S3-205ENST00000415298 KCNB1Q14721 858 aa23.02■■□□□ 1.28
AP1S3-205ENST00000415298 CCDC178Q5BJE1 867 aa23.02■■□□□ 1.28
AP1S3-205ENST00000415298 SP8Q8IXZ3 490 aa23.02■■□□□ 1.28
AP1S3-205ENST00000415298 ANKRD2Q9GZV1 360 aa23.02■■□□□ 1.28
AP1S3-205ENST00000415298 EZRP15311 586 aaKnown RBP23.02■■□□□ 1.27
AP1S3-205ENST00000415298 NEK4P51957 841 aa23.02■■□□□ 1.27
AP1S3-205ENST00000415298 GSDMDP57764 484 aa23.02■■□□□ 1.27
AP1S3-205ENST00000415298 CCDC102BQ68D86 513 aa23.02■■□□□ 1.27
AP1S3-205ENST00000415298 PI16Q6UXB8 463 aa23.02■■□□□ 1.27
AP1S3-205ENST00000415298 ATP6V0A4Q9HBG4 840 aa23.02■■□□□ 1.27
AP1S3-205ENST00000415298 NUB1Q9Y5A7 615 aa23.02■■□□□ 1.27
AP1S3-205ENST00000415298 ZNF804BA4D1E1 1349 aa23.01■■□□□ 1.27
AP1S3-205ENST00000415298 SLC5A1P13866 664 aa23.01■■□□□ 1.27
AP1S3-205ENST00000415298 MYBPC2Q14324 1141 aa23.01■■□□□ 1.27
AP1S3-205ENST00000415298 RILPL2Q969X0 211 aa23.01■■□□□ 1.27
AP1S3-205ENST00000415298 SNRKQ9NRH2 765 aa23.01■■□□□ 1.27
AP1S3-205ENST00000415298 POLLQ9UGP5 575 aa23.01■■□□□ 1.27
AP1S3-205ENST00000415298 IFIT1P09914 478 aaKnown RBP23.01■■□□□ 1.27
AP1S3-205ENST00000415298 UBE4AQ14139 1066 aa23.01■■□□□ 1.27
AP1S3-205ENST00000415298 CEP85LQ5SZL2 805 aa23.01■■□□□ 1.27
AP1S3-205ENST00000415298 HOMER1Q86YM7 354 aa23.01■■□□□ 1.27
AP1S3-205ENST00000415298 LMBR1Q8WVP7 490 aa23.01■■□□□ 1.27
AP1S3-205ENST00000415298 CNKSR1Q969H4 720 aa23.01■■□□□ 1.27
AP1S3-205ENST00000415298 GPATCH3Q96I76 525 aa23.01■■□□□ 1.27
AP1S3-205ENST00000415298 KLC4Q9NSK0 619 aa23.01■■□□□ 1.27
AP1S3-205ENST00000415298 DDX20Q9UHI6 824 aaKnown RBP23.01■■□□□ 1.27
AP1S3-205ENST00000415298 IQSEC3Q9UPP2 1182 aaPredicted RBP23.01■■□□□ 1.27
AP1S3-205ENST00000415298 KIF13BQ9NQT8 1826 aa23■■□□□ 1.27
AP1S3-205ENST00000415298 XDHP47989 1333 aa23■■□□□ 1.27
AP1S3-205ENST00000415298 GLRX3O76003 335 aaKnown RBP23■■□□□ 1.27
AP1S3-205ENST00000415298 TPP2P29144 1249 aaPredicted RBP23■■□□□ 1.27
AP1S3-205ENST00000415298 FIBPO43427 364 aa23■■□□□ 1.27
AP1S3-205ENST00000415298 FMNL1O95466 1100 aaPredicted RBP23■■□□□ 1.27
AP1S3-205ENST00000415298 ATP5JP18859 108 aa23■■□□□ 1.27
AP1S3-205ENST00000415298 SKIDA1Q1XH10 827 aa23■■□□□ 1.27
AP1S3-205ENST00000415298 BEND6Q5SZJ8 279 aaPredicted RBP23■■□□□ 1.27
AP1S3-205ENST00000415298 NLGN2Q8NFZ4 835 aa23■■□□□ 1.27
AP1S3-205ENST00000415298 NUP62CLQ9H1M0 184 aa23■■□□□ 1.27
AP1S3-205ENST00000415298 TTC39AQ5SRH9 613 aa22.99■■□□□ 1.27
AP1S3-205ENST00000415298 C7orf43Q8WVR3 580 aa22.99■■□□□ 1.27
AP1S3-205ENST00000415298 FAM163AQ96GL9 167 aaPredicted RBP22.99■■□□□ 1.27
AP1S3-205ENST00000415298 BIN2Q9UBW5 565 aaPredicted RBP22.99■■□□□ 1.27
AP1S3-205ENST00000415298 ATP6V1DQ9Y5K8 247 aa22.99■■□□□ 1.27
AP1S3-205ENST00000415298 TGFB2P61812 414 aa22.99■■□□□ 1.27
AP1S3-205ENST00000415298 B4GALNT2Q8NHY0 566 aa22.99■■□□□ 1.27
AP1S3-205ENST00000415298 AFAP1L1Q8TED9 768 aa22.99■■□□□ 1.27
AP1S3-205ENST00000415298 FAM84BQ96KN1 310 aaPredicted RBP22.99■■□□□ 1.27
AP1S3-205ENST00000415298 LARP6Q9BRS8 491 aaKnown RBP22.99■■□□□ 1.27
AP1S3-205ENST00000415298 UFL1O94874 794 aa22.98■■□□□ 1.27
AP1S3-205ENST00000415298 TXLNAP40222 546 aa22.98■■□□□ 1.27
AP1S3-205ENST00000415298 KIRREL3Q8IZU9 778 aa22.98■■□□□ 1.27
AP1S3-205ENST00000415298 TTLL6Q8N841 843 aa22.98■■□□□ 1.27
AP1S3-205ENST00000415298 IQCGQ9H095 443 aaKnown RBP22.98■■□□□ 1.27
AP1S3-205ENST00000415298 SUN2Q9UH99 717 aa22.98■■□□□ 1.27
AP1S3-205ENST00000415298 AOX1Q06278 1338 aa22.98■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms