RNA–Protein interactions for RNA: ENST00000415055.2

PTPRK-210, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

TSL 5

Gene PTPRK, Length 782 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-210ENST00000415055 PBX4Q9BYU1 374 aa6.32□□□□□ -1.4
PTPRK-210ENST00000415055 ABI2Q9NYB9 513 aaPredicted RBP6.32□□□□□ -1.4
PTPRK-210ENST00000415055 KCNK4Q9NYG8 393 aa6.32□□□□□ -1.4
PTPRK-210ENST00000415055 KIAA1551Q9HCM1 1747 aa6.32□□□□□ -1.4
PTPRK-210ENST00000415055 FAM177BA6PVY3 158 aa6.31□□□□□ -1.4
PTPRK-210ENST00000415055 TM4SF5O14894 197 aa6.31□□□□□ -1.4
PTPRK-210ENST00000415055 FSCN2O14926 492 aa6.31□□□□□ -1.4
PTPRK-210ENST00000415055 TREHO43280 583 aa6.31□□□□□ -1.4
PTPRK-210ENST00000415055 FZD6O60353 706 aa6.31□□□□□ -1.4
PTPRK-210ENST00000415055 COBLO75128 1261 aa6.31□□□□□ -1.4
PTPRK-210ENST00000415055 HMGB1P09429 215 aaKnown RBP6.31□□□□□ -1.4
PTPRK-210ENST00000415055 CDC25BP30305 580 aa6.31□□□□□ -1.4
PTPRK-210ENST00000415055 UTP4Q969X6 686 aaKnown RBP6.31□□□□□ -1.4
PTPRK-210ENST00000415055 DRC1Q96MC2 740 aa6.31□□□□□ -1.4
PTPRK-210ENST00000415055 USP31Q70CQ4 1352 aa6.31□□□□□ -1.4
PTPRK-210ENST00000415055 PCDH11XQ9BZA7 1347 aa6.3□□□□□ -1.4
PTPRK-210ENST00000415055 PCDH11YQ9BZA8 1340 aa6.3□□□□□ -1.4
PTPRK-210ENST00000415055 FOXN1O15353 648 aa6.3□□□□□ -1.4
PTPRK-210ENST00000415055 PTPRAP18433 802 aa6.3□□□□□ -1.4
PTPRK-210ENST00000415055 FBLN1P23142 703 aa6.3□□□□□ -1.4
PTPRK-210ENST00000415055 HOXC9P31274 260 aa6.3□□□□□ -1.4
PTPRK-210ENST00000415055 USP5P45974 858 aa6.3□□□□□ -1.4
PTPRK-210ENST00000415055 TMF1P82094 1093 aa6.3□□□□□ -1.4
PTPRK-210ENST00000415055 PLCB3Q01970 1234 aa6.3□□□□□ -1.4
PTPRK-210ENST00000415055 FMR1Q06787 632 aaKnown RBP eCLIP6.3□□□□□ -1.4
PTPRK-210ENST00000415055 SF3A1Q15459 793 aaKnown RBP6.3□□□□□ -1.4
PTPRK-210ENST00000415055 DUOXA2Q1HG44 320 aa6.3□□□□□ -1.4
PTPRK-210ENST00000415055 DALRD3Q5D0E6 543 aaKnown RBP6.3□□□□□ -1.4
PTPRK-210ENST00000415055 PDE12Q6L8Q7 609 aaKnown RBP6.3□□□□□ -1.4
PTPRK-210ENST00000415055 ADAMTSL4Q6UY14 1074 aa6.3□□□□□ -1.4
PTPRK-210ENST00000415055 TMC7Q7Z402 723 aa6.3□□□□□ -1.4
PTPRK-210ENST00000415055 NCAPG2Q86XI2 1143 aa6.3□□□□□ -1.4
PTPRK-210ENST00000415055 CEP120Q8N960 986 aa6.3□□□□□ -1.4
PTPRK-210ENST00000415055 LINC00116Q8NCU8 138 aa6.3□□□□□ -1.4
PTPRK-210ENST00000415055 EDEM1Q92611 657 aa6.3□□□□□ -1.4
PTPRK-210ENST00000415055 ALKBH8Q96BT7 664 aaKnown RBP6.3□□□□□ -1.4
PTPRK-210ENST00000415055 FAM46AQ96IP4 442 aaKnown RBP6.3□□□□□ -1.4
PTPRK-210ENST00000415055 ADAM19Q9H013 955 aa6.3□□□□□ -1.4
PTPRK-210ENST00000415055 PIM2Q9P1W9 311 aa6.3□□□□□ -1.4
PTPRK-210ENST00000415055 POLIQ9UNA4 740 aa6.3□□□□□ -1.4
PTPRK-210ENST00000415055 MAP2P11137 1827 aaKnown RBP6.29□□□□□ -1.4
PTPRK-210ENST00000415055 KIAA1324LA8MWY0 1029 aaPredicted RBP6.29□□□□□ -1.4
PTPRK-210ENST00000415055 SCAMP3O14828 347 aaKnown RBP6.29□□□□□ -1.4
PTPRK-210ENST00000415055 MED26O95402 600 aa6.29□□□□□ -1.4
PTPRK-210ENST00000415055 TGFB1P01137 390 aa6.29□□□□□ -1.4
PTPRK-210ENST00000415055 CYP2E1P05181 493 aaPredicted RBP6.29□□□□□ -1.4
PTPRK-210ENST00000415055 C4AP0C0L4 1744 aa6.29□□□□□ -1.4
PTPRK-210ENST00000415055 VEGFAP15692 232 aaPredicted RBP6.29□□□□□ -1.4
PTPRK-210ENST00000415055 EPHA1P21709 976 aa6.29□□□□□ -1.4
PTPRK-210ENST00000415055 NFIAQ12857 509 aa6.29□□□□□ -1.4
PTPRK-210ENST00000415055 MRPL58Q14197 206 aaKnown RBP6.29□□□□□ -1.4
PTPRK-210ENST00000415055 KIAA1211Q6ZU35 1233 aa6.29□□□□□ -1.4
PTPRK-210ENST00000415055 SMG6Q86US8 1419 aaKnown RBP6.29□□□□□ -1.4
PTPRK-210ENST00000415055 SREK1Q8WXA9 508 aaKnown RBP6.29□□□□□ -1.4
PTPRK-210ENST00000415055 COG3Q96JB2 828 aa6.29□□□□□ -1.4
PTPRK-210ENST00000415055 ELP3Q9H9T3 547 aa6.29□□□□□ -1.4
PTPRK-210ENST00000415055 SEC31BQ9NQW1 1179 aa6.29□□□□□ -1.4
PTPRK-210ENST00000415055 SH2B1Q9NRF2 756 aaPredicted RBP6.29□□□□□ -1.4
PTPRK-210ENST00000415055 SBNO2Q9Y2G9 1366 aa6.29□□□□□ -1.4
PTPRK-210ENST00000415055 CGNL1Q0VF96 1302 aa6.28□□□□□ -1.4
PTPRK-210ENST00000415055 MAP3K19Q56UN5 1328 aa6.28□□□□□ -1.4
PTPRK-210ENST00000415055 TIAM2Q8IVF5 1701 aa6.28□□□□□ -1.4
PTPRK-210ENST00000415055 EDC4Q6P2E9 1401 aaKnown RBP6.28□□□□□ -1.4
PTPRK-210ENST00000415055 C10orf71Q711Q0 1435 aa6.28□□□□□ -1.4
PTPRK-210ENST00000415055 PRPF40AO75400 957 aaKnown RBP6.28□□□□□ -1.4
PTPRK-210ENST00000415055 CANXP27824 592 aaKnown RBP6.28□□□□□ -1.4
PTPRK-210ENST00000415055 RFC4P35249 363 aa6.28□□□□□ -1.4
PTPRK-210ENST00000415055 CTCFP49711 727 aaPredicted RBP6.28□□□□□ -1.4
PTPRK-210ENST00000415055 DSC3Q14574 896 aa6.28□□□□□ -1.4
PTPRK-210ENST00000415055 NBPF6Q5VWK0 638 aa6.28□□□□□ -1.4
PTPRK-210ENST00000415055 ZNF438Q7Z4V0 828 aa6.28□□□□□ -1.4
PTPRK-210ENST00000415055 ZDHHC13Q8IUH4 622 aa6.28□□□□□ -1.4
PTPRK-210ENST00000415055 TRIM42Q8IWZ5 723 aa6.28□□□□□ -1.4
PTPRK-210ENST00000415055 NLGN1Q8N2Q7 840 aa6.28□□□□□ -1.4
PTPRK-210ENST00000415055 UBASH3BQ8TF42 649 aa6.28□□□□□ -1.4
PTPRK-210ENST00000415055 PIGBQ92521 554 aa6.28□□□□□ -1.4
PTPRK-210ENST00000415055 WNT8BQ93098 351 aa6.28□□□□□ -1.4
PTPRK-210ENST00000415055 MYRFLQ96LU7 910 aa6.28□□□□□ -1.4
PTPRK-210ENST00000415055 NBPF4Q96M43 638 aa6.28□□□□□ -1.4
PTPRK-210ENST00000415055 FRMD6Q96NE9 622 aa6.28□□□□□ -1.4
PTPRK-210ENST00000415055 POP1Q99575 1024 aaKnown RBP6.28□□□□□ -1.4
PTPRK-210ENST00000415055 SLC12A5Q9H2X9 1139 aa6.28□□□□□ -1.4
PTPRK-210ENST00000415055 C7orf69Q9H7B7 122 aa6.28□□□□□ -1.4
PTPRK-210ENST00000415055 GOLGA2P5Q9HBQ8 144 aa6.28□□□□□ -1.4
PTPRK-210ENST00000415055 TERF2IPQ9NYB0 399 aa6.28□□□□□ -1.4
PTPRK-210ENST00000415055 TMOD3Q9NYL9 352 aa6.28□□□□□ -1.4
PTPRK-210ENST00000415055 TMEM63CQ9P1W3 806 aa6.28□□□□□ -1.4
PTPRK-210ENST00000415055 ROCK2O75116 1388 aaKnown RBP6.28□□□□□ -1.4
PTPRK-210ENST00000415055 A6NHS1 94 aa6.27□□□□□ -1.41
PTPRK-210ENST00000415055 CCDC85CA6NKD9 419 aa6.27□□□□□ -1.41
PTPRK-210ENST00000415055 H3BRJ5 948 aa6.27□□□□□ -1.41
PTPRK-210ENST00000415055 DDX3YO15523 660 aaKnown RBP6.27□□□□□ -1.41
PTPRK-210ENST00000415055 PAX4O43316 350 aa6.27□□□□□ -1.41
PTPRK-210ENST00000415055 ADAM11O75078 769 aa6.27□□□□□ -1.41
PTPRK-210ENST00000415055 RECKO95980 971 aa6.27□□□□□ -1.41
PTPRK-210ENST00000415055 PDGFAP04085 211 aa6.27□□□□□ -1.41
PTPRK-210ENST00000415055 RPLP1P05386 114 aaKnown RBP6.27□□□□□ -1.41
PTPRK-210ENST00000415055 CHRNA5P30532 468 aa6.27□□□□□ -1.41
PTPRK-210ENST00000415055 GRIK1P39086 918 aa6.27□□□□□ -1.41
PTPRK-210ENST00000415055 IRAK1P51617 712 aa6.27□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 721.2 ms