RNA–Protein interactions for RNA: ENST00000414558.2

ATG4C-204, Transcript of autophagy related 4C cysteine peptidase, humanhuman

TSL 5

Gene ATG4C, Length 464 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4C-204ENST00000414558 ZNF394Q53GI3 561 aa9.03□□□□□ -0.96
ATG4C-204ENST00000414558 TSPYL5Q86VY4 417 aaPredicted RBP9.03□□□□□ -0.96
ATG4C-204ENST00000414558 CNNM2Q9H8M5 875 aa9.03□□□□□ -0.96
ATG4C-204ENST00000414558 GOLGA2P5Q9HBQ8 144 aa9.03□□□□□ -0.96
ATG4C-204ENST00000414558 DUSP13Q9UII6 198 aa9.03□□□□□ -0.96
ATG4C-204ENST00000414558 KRTAP9-1A8MXZ3 250 aaPredicted RBP9.02□□□□□ -0.97
ATG4C-204ENST00000414558 UBOX5O94941 541 aa9.02□□□□□ -0.97
ATG4C-204ENST00000414558 GDNFP39905 211 aa9.02□□□□□ -0.97
ATG4C-204ENST00000414558 CCNFP41002 786 aa9.02□□□□□ -0.97
ATG4C-204ENST00000414558 RAD51AP2Q09MP3 1159 aa9.02□□□□□ -0.97
ATG4C-204ENST00000414558 NLRC3Q7RTR2 1065 aa9.02□□□□□ -0.97
ATG4C-204ENST00000414558 ZSWIM9Q86XI8 627 aa9.02□□□□□ -0.97
ATG4C-204ENST00000414558 TMEM40Q8WWA1 233 aa9.02□□□□□ -0.97
ATG4C-204ENST00000414558 ATG4CQ96DT6 458 aa9.02□□□□□ -0.97
ATG4C-204ENST00000414558 SLAMF8Q9P0V8 285 aa9.02□□□□□ -0.97
ATG4C-204ENST00000414558 PCDHGB7Q9Y5F8 929 aa9.02□□□□□ -0.97
ATG4C-204ENST00000414558 MEIS3P2A8K0S8 358 aa9.01□□□□□ -0.97
ATG4C-204ENST00000414558 WASH4PA8MWX3 477 aa9.01□□□□□ -0.97
ATG4C-204ENST00000414558 KCNMB1Q16558 191 aa9.01□□□□□ -0.97
ATG4C-204ENST00000414558 OGFOD2Q6N063 350 aa9.01□□□□□ -0.97
ATG4C-204ENST00000414558 VWCEQ96DN2 955 aa9.01□□□□□ -0.97
ATG4C-204ENST00000414558 ASCC2Q9H1I8 757 aaPredicted RBP9.01□□□□□ -0.97
ATG4C-204ENST00000414558 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP9.01□□□□□ -0.97
ATG4C-204ENST00000414558 KRTAP9-6A0A140TA67 174 aa9□□□□□ -0.97
ATG4C-204ENST00000414558 LTKP29376 864 aa9□□□□□ -0.97
ATG4C-204ENST00000414558 CLEC16AQ2KHT3 1053 aa9□□□□□ -0.97
ATG4C-204ENST00000414558 KRTAP4-12Q9BQ66 201 aa9□□□□□ -0.97
ATG4C-204ENST00000414558 C19orf73Q9NVV2 129 aa9□□□□□ -0.97
ATG4C-204ENST00000414558 DDX41Q9UJV9 622 aaKnown RBP9□□□□□ -0.97
ATG4C-204ENST00000414558 IMPDH2P12268 514 aa8.99□□□□□ -0.97
ATG4C-204ENST00000414558 RAC2P15153 192 aa8.99□□□□□ -0.97
ATG4C-204ENST00000414558 EGR3Q06889 387 aa8.99□□□□□ -0.97
ATG4C-204ENST00000414558 POU5F2Q8N7G0 328 aa8.99□□□□□ -0.97
ATG4C-204ENST00000414558 ENOX1Q8TC92 643 aaKnown RBP8.99□□□□□ -0.97
ATG4C-204ENST00000414558 MRRFQ96E11 262 aaKnown RBP8.99□□□□□ -0.97
ATG4C-204ENST00000414558 KIRREL1Q96J84 757 aa8.99□□□□□ -0.97
ATG4C-204ENST00000414558 TMEM59LQ9UK28 342 aa8.99□□□□□ -0.97
ATG4C-204ENST00000414558 CLEC3AO75596 197 aa8.98□□□□□ -0.97
ATG4C-204ENST00000414558 NME1P15531 152 aaKnown RBP8.98□□□□□ -0.97
ATG4C-204ENST00000414558 POLR2BP30876 1174 aaKnown RBP8.98□□□□□ -0.97
ATG4C-204ENST00000414558 TTC6Q86TZ1 520 aa8.98□□□□□ -0.97
ATG4C-204ENST00000414558 ZNF654Q8IZM8 581 aa8.98□□□□□ -0.97
ATG4C-204ENST00000414558 ZNRF3Q9ULT6 936 aa8.98□□□□□ -0.97
ATG4C-204ENST00000414558 DNAJC25-GNG10A0A024R161 153 aa8.97□□□□□ -0.97
ATG4C-204ENST00000414558 TNFRSF10CO14798 259 aa8.97□□□□□ -0.97
ATG4C-204ENST00000414558 RACK1P63244 317 aaKnown RBP8.97□□□□□ -0.97
ATG4C-204ENST00000414558 NMIQ13287 307 aaPredicted RBP8.97□□□□□ -0.97
ATG4C-204ENST00000414558 RALGPS1Q5JS13 557 aa8.97□□□□□ -0.97
ATG4C-204ENST00000414558 NBPF12Q5TAG4 269 aaPredicted RBP8.97□□□□□ -0.97
ATG4C-204ENST00000414558 SYTL4Q96C24 671 aaPredicted RBP8.97□□□□□ -0.97
ATG4C-204ENST00000414558 ANTXR1Q9H6X2 564 aa8.97□□□□□ -0.97
ATG4C-204ENST00000414558 FAM53CQ9NYF3 392 aa8.97□□□□□ -0.97
ATG4C-204ENST00000414558 PCDHA11Q9Y5I1 949 aa8.97□□□□□ -0.97
ATG4C-204ENST00000414558 SHISA3A0PJX4 238 aa8.96□□□□□ -0.98
ATG4C-204ENST00000414558 FYB2Q5VWT5 728 aa8.96□□□□□ -0.98
ATG4C-204ENST00000414558 FERD3LQ96RJ6 166 aa8.96□□□□□ -0.98
ATG4C-204ENST00000414558 GLI1P08151 1106 aa8.95□□□□□ -0.98
ATG4C-204ENST00000414558 HK2P52789 917 aa8.95□□□□□ -0.98
ATG4C-204ENST00000414558 NBPF9Q3BBW0 867 aa8.95□□□□□ -0.98
ATG4C-204ENST00000414558 TMEM67Q5HYA8 995 aa8.95□□□□□ -0.98
ATG4C-204ENST00000414558 SYTL5Q8TDW5 730 aaPredicted RBP8.95□□□□□ -0.98
ATG4C-204ENST00000414558 DHX38Q92620 1227 aaKnown RBP8.95□□□□□ -0.98
ATG4C-204ENST00000414558 ADAMTS10Q9H324 1103 aa8.95□□□□□ -0.98
ATG4C-204ENST00000414558 INTS3Q68E01 1043 aaKnown RBP8.94□□□□□ -0.98
ATG4C-204ENST00000414558 METTL16Q86W50 562 aaKnown RBP8.94□□□□□ -0.98
ATG4C-204ENST00000414558 RGS22Q8NE09 1264 aa8.94□□□□□ -0.98
ATG4C-204ENST00000414558 SPATA32Q96LK8 384 aa8.94□□□□□ -0.98
ATG4C-204ENST00000414558 HDAC8Q9BY41 377 aa8.94□□□□□ -0.98
ATG4C-204ENST00000414558 FARP2O94887 1054 aaPredicted RBP8.93□□□□□ -0.98
ATG4C-204ENST00000414558 YBX3P16989 372 aaKnown RBP eCLIP8.93□□□□□ -0.98
ATG4C-204ENST00000414558 COL9A2Q14055 689 aaPredicted RBP8.93□□□□□ -0.98
ATG4C-204ENST00000414558 DAGLBQ8NCG7 672 aa8.93□□□□□ -0.98
ATG4C-204ENST00000414558 DHRS1Q96LJ7 313 aa8.93□□□□□ -0.98
ATG4C-204ENST00000414558 SLC6A18Q96N87 628 aa8.93□□□□□ -0.98
ATG4C-204ENST00000414558 SLC9A7Q96T83 725 aa8.93□□□□□ -0.98
ATG4C-204ENST00000414558 ZNF503-AS2A6NEH8 195 aa8.92□□□□□ -0.98
ATG4C-204ENST00000414558 LRRC10BA6NIK2 292 aa8.92□□□□□ -0.98
ATG4C-204ENST00000414558 HPXP02790 462 aa8.92□□□□□ -0.98
ATG4C-204ENST00000414558 KRTAP19-1Q8IUB9 90 aa8.92□□□□□ -0.98
ATG4C-204ENST00000414558 TMEM192Q8IY95 271 aa8.92□□□□□ -0.98
ATG4C-204ENST00000414558 TAB3Q8N5C8 712 aaPredicted RBP8.92□□□□□ -0.98
ATG4C-204ENST00000414558 ZNF655Q8N720 491 aaPredicted RBP8.92□□□□□ -0.98
ATG4C-204ENST00000414558 PDZD8Q8NEN9 1154 aa8.92□□□□□ -0.98
ATG4C-204ENST00000414558 ABHD4Q8TB40 342 aa8.92□□□□□ -0.98
ATG4C-204ENST00000414558 MYLIPQ8WY64 445 aa8.92□□□□□ -0.98
ATG4C-204ENST00000414558 ZNF512BQ96KM6 892 aaPredicted RBP8.92□□□□□ -0.98
ATG4C-204ENST00000414558 TM9SF2Q99805 663 aa8.92□□□□□ -0.98
ATG4C-204ENST00000414558 MKRN2Q9H000 416 aaKnown RBP8.92□□□□□ -0.98
ATG4C-204ENST00000414558 KIAA1522Q9P206 1035 aaPredicted RBP8.92□□□□□ -0.98
ATG4C-204ENST00000414558 CCDC9Q9Y3X0 531 aaKnown RBP8.92□□□□□ -0.98
ATG4C-204ENST00000414558 ZGLP1P0C6A0 271 aa8.91□□□□□ -0.98
ATG4C-204ENST00000414558 HDLBPQ00341 1268 aaKnown RBP8.91□□□□□ -0.98
ATG4C-204ENST00000414558 TEKQ02763 1124 aa8.91□□□□□ -0.98
ATG4C-204ENST00000414558 DUSP4Q13115 394 aa8.91□□□□□ -0.98
ATG4C-204ENST00000414558 PAK2Q13177 524 aa8.91□□□□□ -0.98
ATG4C-204ENST00000414558 FBXW10Q5XX13 1052 aa8.91□□□□□ -0.98
ATG4C-204ENST00000414558 MPZL3Q6UWV2 235 aa8.91□□□□□ -0.98
ATG4C-204ENST00000414558 RNF111Q6ZNA4 994 aa8.91□□□□□ -0.98
ATG4C-204ENST00000414558 TMC3Q7Z5M5 1100 aa8.91□□□□□ -0.98
ATG4C-204ENST00000414558 NT5DC4Q86YG4 428 aa8.91□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms