RNA–Protein interactions for RNA: ENST00000414407.1

LINC00398-201, long intergenic non-protein coding RNA 398, humanhuman

TSL 2 BASIC

Gene LINC00398, Length 906 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00398-201ENST00000414407 OSBPP22059 807 aa19.44■□□□□ 0.7
LINC00398-201ENST00000414407 ATP2B2Q01814 1243 aa19.44■□□□□ 0.7
LINC00398-201ENST00000414407 DGKZQ13574 1117 aa19.44■□□□□ 0.7
LINC00398-201ENST00000414407 ZYXQ15942 572 aaKnown RBP19.44■□□□□ 0.7
LINC00398-201ENST00000414407 CREB3L3Q68CJ9 461 aa19.44■□□□□ 0.7
LINC00398-201ENST00000414407 IQCA1Q86XH1 822 aa19.44■□□□□ 0.7
LINC00398-201ENST00000414407 ZSWIM5Q9P217 1185 aa19.44■□□□□ 0.7
LINC00398-201ENST00000414407 B4E1Z4 1266 aa19.43■□□□□ 0.7
LINC00398-201ENST00000414407 USP17L15C9J2P7 530 aa19.43■□□□□ 0.7
LINC00398-201ENST00000414407 USP17L13C9JLJ4 530 aa19.43■□□□□ 0.7
LINC00398-201ENST00000414407 USP17L11C9JVI0 530 aa19.43■□□□□ 0.7
LINC00398-201ENST00000414407 USP17L18D6R9N7 530 aa19.43■□□□□ 0.7
LINC00398-201ENST00000414407 USP17L22D6RA61 530 aa19.43■□□□□ 0.7
LINC00398-201ENST00000414407 USP17L17D6RBQ6 530 aa19.43■□□□□ 0.7
LINC00398-201ENST00000414407 USP17L19D6RCP7 530 aa19.43■□□□□ 0.7
LINC00398-201ENST00000414407 USP17L20D6RJB6 530 aa19.43■□□□□ 0.7
LINC00398-201ENST00000414407 TLR2O60603 784 aa19.43■□□□□ 0.7
LINC00398-201ENST00000414407 VCAM1P19320 739 aa19.43■□□□□ 0.7
LINC00398-201ENST00000414407 USP17L24Q0WX57 530 aa19.43■□□□□ 0.7
LINC00398-201ENST00000414407 TSGA10IPQ3SY00 556 aa19.43■□□□□ 0.7
LINC00398-201ENST00000414407 GMCL1P1Q8NEA9 526 aa19.43■□□□□ 0.7
LINC00398-201ENST00000414407 NCOA7Q8NI08 942 aa19.43■□□□□ 0.7
LINC00398-201ENST00000414407 WDR46O15213 610 aaKnown RBP19.42■□□□□ 0.7
LINC00398-201ENST00000414407 NMT2O60551 498 aa19.42■□□□□ 0.7
LINC00398-201ENST00000414407 CATSPERGQ6ZRH7 1159 aa19.42■□□□□ 0.7
LINC00398-201ENST00000414407 DGKHQ86XP1 1220 aa19.42■□□□□ 0.7
LINC00398-201ENST00000414407 STX8Q9UNK0 236 aa19.42■□□□□ 0.7
LINC00398-201ENST00000414407 F5H6K3 240 aa19.41■□□□□ 0.7
LINC00398-201ENST00000414407 GPR25O00155 361 aa19.41■□□□□ 0.7
LINC00398-201ENST00000414407 ZKSCAN1P17029 563 aaPredicted RBP19.41■□□□□ 0.7
LINC00398-201ENST00000414407 IRX3P78415 501 aaPredicted RBP19.41■□□□□ 0.7
LINC00398-201ENST00000414407 KLRC3Q07444 240 aa19.41■□□□□ 0.7
LINC00398-201ENST00000414407 KIAA1755Q5JYT7 1200 aa19.41■□□□□ 0.7
LINC00398-201ENST00000414407 STOX1Q6ZVD7 989 aa19.41■□□□□ 0.7
LINC00398-201ENST00000414407 RALYLQ86SE5 291 aaKnown RBP19.41■□□□□ 0.7
LINC00398-201ENST00000414407 NKX2-3Q8TAU0 364 aa19.41■□□□□ 0.7
LINC00398-201ENST00000414407 ANKS1AQ92625 1134 aa19.41■□□□□ 0.7
LINC00398-201ENST00000414407 KCNB2Q92953 911 aa19.41■□□□□ 0.7
LINC00398-201ENST00000414407 ASCC2Q9H1I8 757 aaPredicted RBP19.41■□□□□ 0.7
LINC00398-201ENST00000414407 R3HDMLQ9H3Y0 253 aa19.41■□□□□ 0.7
LINC00398-201ENST00000414407 TAF6LQ9Y6J9 622 aa19.41■□□□□ 0.7
LINC00398-201ENST00000414407 ADGRA2Q96PE1 1338 aa19.41■□□□□ 0.7
LINC00398-201ENST00000414407 CYP2C8P10632 490 aa19.4■□□□□ 0.7
LINC00398-201ENST00000414407 TOP1P11387 765 aaKnown RBP19.4■□□□□ 0.7
LINC00398-201ENST00000414407 HSPA4P34932 840 aa19.4■□□□□ 0.7
LINC00398-201ENST00000414407 RCSD1Q6JBY9 416 aa19.4■□□□□ 0.7
LINC00398-201ENST00000414407 C17orf99Q6UX52 265 aa19.4■□□□□ 0.7
LINC00398-201ENST00000414407 SMCR8Q8TEV9 937 aaPredicted RBP19.4■□□□□ 0.7
LINC00398-201ENST00000414407 GTF3C2Q8WUA4 911 aaPredicted RBP19.4■□□□□ 0.7
LINC00398-201ENST00000414407 ZSCAN10Q96SZ4 725 aaPredicted RBP19.4■□□□□ 0.7
LINC00398-201ENST00000414407 MTA3Q9BTC8 594 aa19.4■□□□□ 0.7
LINC00398-201ENST00000414407 RPAP3Q9H6T3 665 aaPredicted RBP19.4■□□□□ 0.7
LINC00398-201ENST00000414407 PRDM10Q9NQV6 1147 aa19.4■□□□□ 0.7
LINC00398-201ENST00000414407 TSKSQ9UJT2 592 aa19.4■□□□□ 0.7
LINC00398-201ENST00000414407 NDUFB10O96000 172 aa19.39■□□□□ 0.69
LINC00398-201ENST00000414407 GCLCP48506 637 aaPredicted RBP19.39■□□□□ 0.69
LINC00398-201ENST00000414407 LBX1P52954 281 aa19.39■□□□□ 0.69
LINC00398-201ENST00000414407 KRT32Q14532 448 aa19.39■□□□□ 0.69
LINC00398-201ENST00000414407 SPICE1Q8N0Z3 855 aa19.39■□□□□ 0.69
LINC00398-201ENST00000414407 UBAC1Q9BSL1 405 aa19.39■□□□□ 0.69
LINC00398-201ENST00000414407 USP26Q9BXU7 913 aa19.39■□□□□ 0.69
LINC00398-201ENST00000414407 COG2Q14746 738 aa19.38■□□□□ 0.69
LINC00398-201ENST00000414407 LBX2Q6XYB7 198 aa19.38■□□□□ 0.69
LINC00398-201ENST00000414407 MB21D2Q8IYB1 491 aaPredicted RBP19.38■□□□□ 0.69
LINC00398-201ENST00000414407 LRRC47Q8N1G4 583 aaKnown RBP19.38■□□□□ 0.69
LINC00398-201ENST00000414407 GMCL1Q96IK5 515 aa19.38■□□□□ 0.69
LINC00398-201ENST00000414407 P2RX7Q99572 595 aaKnown RBP19.38■□□□□ 0.69
LINC00398-201ENST00000414407 TMEM47Q9BQJ4 181 aa19.38■□□□□ 0.69
LINC00398-201ENST00000414407 HOXC10Q9NYD6 342 aa19.38■□□□□ 0.69
LINC00398-201ENST00000414407 TNKSO95271 1327 aa19.37■□□□□ 0.69
LINC00398-201ENST00000414407 MYPNQ86TC9 1320 aa19.37■□□□□ 0.69
LINC00398-201ENST00000414407 FKTNO75072 461 aa19.37■□□□□ 0.69
LINC00398-201ENST00000414407 BCRP11274 1271 aa19.37■□□□□ 0.69
LINC00398-201ENST00000414407 HERVK_113P62684 666 aa19.37■□□□□ 0.69
LINC00398-201ENST00000414407 SP3Q02447 781 aa19.37■□□□□ 0.69
LINC00398-201ENST00000414407 SLFN13Q68D06 897 aa19.37■□□□□ 0.69
LINC00398-201ENST00000414407 CYB5R4Q7L1T6 521 aa19.37■□□□□ 0.69
LINC00398-201ENST00000414407 ENAHQ8N8S7 591 aaPredicted RBP19.37■□□□□ 0.69
LINC00398-201ENST00000414407 ZKSCAN3Q9BRR0 538 aa19.37■□□□□ 0.69
LINC00398-201ENST00000414407 TANGO6Q9C0B7 1094 aa19.37■□□□□ 0.69
LINC00398-201ENST00000414407 MYH4Q9Y623 1939 aa19.37■□□□□ 0.69
LINC00398-201ENST00000414407 RAD21O60216 631 aa19.36■□□□□ 0.69
LINC00398-201ENST00000414407 MCM5P33992 734 aa19.36■□□□□ 0.69
LINC00398-201ENST00000414407 SART3Q15020 963 aaKnown RBP19.36■□□□□ 0.69
LINC00398-201ENST00000414407 SEC23AQ15436 765 aa19.36■□□□□ 0.69
LINC00398-201ENST00000414407 RASEFQ8IZ41 740 aa19.36■□□□□ 0.69
LINC00398-201ENST00000414407 ZNF296Q8WUU4 475 aaPredicted RBP19.36■□□□□ 0.69
LINC00398-201ENST00000414407 CPA4Q9UI42 421 aa19.36■□□□□ 0.69
LINC00398-201ENST00000414407 ERICH2A1L162 156 aa19.35■□□□□ 0.69
LINC00398-201ENST00000414407 HMGB1P09429 215 aaKnown RBP19.35■□□□□ 0.69
LINC00398-201ENST00000414407 BMP3P12645 472 aa19.35■□□□□ 0.69
LINC00398-201ENST00000414407 MCCP23508 829 aa19.35■□□□□ 0.69
LINC00398-201ENST00000414407 FAM110CQ1W6H9 321 aa19.35■□□□□ 0.69
LINC00398-201ENST00000414407 FAM83BQ5T0W9 1011 aa19.35■□□□□ 0.69
LINC00398-201ENST00000414407 DCAF4Q8WV16 495 aa19.35■□□□□ 0.69
LINC00398-201ENST00000414407 NEK1Q96PY6 1258 aa19.35■□□□□ 0.69
LINC00398-201ENST00000414407 MORF4L1Q9UBU8 362 aa19.35■□□□□ 0.69
LINC00398-201ENST00000414407 WDR19Q8NEZ3 1342 aa19.34■□□□□ 0.69
LINC00398-201ENST00000414407 SPDYE16A6NNV3 312 aaPredicted RBP19.34■□□□□ 0.69
LINC00398-201ENST00000414407 IFIT3O14879 490 aaKnown RBP19.34■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms