RNA–Protein interactions for RNA: ENST00000413963.2

AP001888.1-201, humanhuman

BASIC

Gene AP001888.1, Length 720 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP001888.1-201ENST00000413963 PROCA1Q8NCQ7 364 aaPredicted RBP12.55□□□□□ -0.4
AP001888.1-201ENST00000413963 IGDCC4Q8TDY8 1250 aa12.55□□□□□ -0.4
AP001888.1-201ENST00000413963 CNKSR2Q8WXI2 1034 aa12.55□□□□□ -0.4
AP001888.1-201ENST00000413963 PDRG1Q9NUG6 133 aa12.55□□□□□ -0.4
AP001888.1-201ENST00000413963 FRMD4AQ9P2Q2 1039 aaPredicted RBP12.55□□□□□ -0.4
AP001888.1-201ENST00000413963 A0A0G2JLL6 359 aaPredicted RBP12.54□□□□□ -0.4
AP001888.1-201ENST00000413963 CCDC69A6NI79 296 aa12.54□□□□□ -0.4
AP001888.1-201ENST00000413963 SH2B2O14492 632 aaPredicted RBP12.54□□□□□ -0.4
AP001888.1-201ENST00000413963 SREBF2Q12772 1141 aa12.54□□□□□ -0.4
AP001888.1-201ENST00000413963 PABPC4Q13310 644 aaKnown RBP eCLIP12.54□□□□□ -0.4
AP001888.1-201ENST00000413963 SEC23AQ15436 765 aa12.54□□□□□ -0.4
AP001888.1-201ENST00000413963 RCSD1Q6JBY9 416 aa12.54□□□□□ -0.4
AP001888.1-201ENST00000413963 CYP4F22Q6NT55 531 aa12.54□□□□□ -0.4
AP001888.1-201ENST00000413963 Q6ZUG5 572 aa12.54□□□□□ -0.4
AP001888.1-201ENST00000413963 PRRT2Q7Z6L0 340 aaPredicted RBP12.54□□□□□ -0.4
AP001888.1-201ENST00000413963 CATIPQ7Z7H3 387 aa12.54□□□□□ -0.4
AP001888.1-201ENST00000413963 CCDC84Q86UT8 332 aaPredicted RBP12.54□□□□□ -0.4
AP001888.1-201ENST00000413963 SIAH1Q8IUQ4 282 aa12.54□□□□□ -0.4
AP001888.1-201ENST00000413963 PNMA1Q8ND90 353 aa12.54□□□□□ -0.4
AP001888.1-201ENST00000413963 GMCL1P1Q8NEA9 526 aa12.54□□□□□ -0.4
AP001888.1-201ENST00000413963 ACER1Q8TDN7 264 aa12.54□□□□□ -0.4
AP001888.1-201ENST00000413963 CAPNS2Q96L46 248 aa12.54□□□□□ -0.4
AP001888.1-201ENST00000413963 C12orf42Q96LP6 360 aa12.54□□□□□ -0.4
AP001888.1-201ENST00000413963 TMEM47Q9BQJ4 181 aa12.54□□□□□ -0.4
AP001888.1-201ENST00000413963 UPF3BQ9BZI7 483 aaKnown RBP12.54□□□□□ -0.4
AP001888.1-201ENST00000413963 ALDH8A1Q9H2A2 487 aaPredicted RBP12.54□□□□□ -0.4
AP001888.1-201ENST00000413963 VCPKMTQ9H867 229 aa12.54□□□□□ -0.4
AP001888.1-201ENST00000413963 A0A1W2PRG0 241 aa12.53□□□□□ -0.4
AP001888.1-201ENST00000413963 FAM155AB1AL88 458 aaPredicted RBP12.53□□□□□ -0.4
AP001888.1-201ENST00000413963 F5H6K3 240 aa12.53□□□□□ -0.4
AP001888.1-201ENST00000413963 RAD21O60216 631 aa12.53□□□□□ -0.4
AP001888.1-201ENST00000413963 ST18O60284 1047 aa12.53□□□□□ -0.4
AP001888.1-201ENST00000413963 CALM1P0DP23 149 aa12.53□□□□□ -0.4
AP001888.1-201ENST00000413963 CALM2P0DP24 149 aa12.53□□□□□ -0.4
AP001888.1-201ENST00000413963 CALM3P0DP25 149 aa12.53□□□□□ -0.4
AP001888.1-201ENST00000413963 GJA5P36382 358 aa12.53□□□□□ -0.4
AP001888.1-201ENST00000413963 MAP2K2P36507 400 aa12.53□□□□□ -0.4
AP001888.1-201ENST00000413963 NEK4P51957 841 aa12.53□□□□□ -0.4
AP001888.1-201ENST00000413963 HMGCS2P54868 508 aa12.53□□□□□ -0.4
AP001888.1-201ENST00000413963 KLRC3Q07444 240 aa12.53□□□□□ -0.4
AP001888.1-201ENST00000413963 MKRN3Q13064 507 aaKnown RBP12.53□□□□□ -0.4
AP001888.1-201ENST00000413963 GRM1Q13255 1194 aa12.53□□□□□ -0.4
AP001888.1-201ENST00000413963 OTUD7BQ6GQQ9 843 aa12.53□□□□□ -0.4
AP001888.1-201ENST00000413963 SGMS1Q86VZ5 419 aa12.53□□□□□ -0.4
AP001888.1-201ENST00000413963 CLEC10AQ8IUN9 316 aa12.53□□□□□ -0.4
AP001888.1-201ENST00000413963 LRRC47Q8N1G4 583 aaKnown RBP12.53□□□□□ -0.4
AP001888.1-201ENST00000413963 NKX2-3Q8TAU0 364 aa12.53□□□□□ -0.4
AP001888.1-201ENST00000413963 LY9Q9HBG7 655 aa12.53□□□□□ -0.4
AP001888.1-201ENST00000413963 SLC12A7Q9Y666 1083 aa12.53□□□□□ -0.4
AP001888.1-201ENST00000413963 CCL15-CCL14A0A0B4J2E2 113 aa12.52□□□□□ -0.41
AP001888.1-201ENST00000413963 TESPA1A2RU30 521 aaPredicted RBP12.52□□□□□ -0.41
AP001888.1-201ENST00000413963 WDR46O15213 610 aaKnown RBP12.52□□□□□ -0.41
AP001888.1-201ENST00000413963 CPA1P15085 419 aa12.52□□□□□ -0.41
AP001888.1-201ENST00000413963 ZYXQ15942 572 aaKnown RBP12.52□□□□□ -0.41
AP001888.1-201ENST00000413963 CCL15Q16663 113 aa12.52□□□□□ -0.41
AP001888.1-201ENST00000413963 SLFN13Q68D06 897 aa12.52□□□□□ -0.41
AP001888.1-201ENST00000413963 GADL1Q6ZQY3 521 aa12.52□□□□□ -0.41
AP001888.1-201ENST00000413963 DCAF4Q8WV16 495 aa12.52□□□□□ -0.41
AP001888.1-201ENST00000413963 GMCL1Q96IK5 515 aa12.52□□□□□ -0.41
AP001888.1-201ENST00000413963 MS4A4AQ96JQ5 239 aa12.52□□□□□ -0.41
AP001888.1-201ENST00000413963 MAP3K14Q99558 947 aa12.52□□□□□ -0.41
AP001888.1-201ENST00000413963 LRRC2Q9BYS8 371 aa12.52□□□□□ -0.41
AP001888.1-201ENST00000413963 AGXT2Q9BYV1 514 aa12.52□□□□□ -0.41
AP001888.1-201ENST00000413963 ZCCHC17Q9NP64 241 aaKnown RBP12.52□□□□□ -0.41
AP001888.1-201ENST00000413963 WDR33Q9C0J8 1336 aaKnown RBP12.52□□□□□ -0.41
AP001888.1-201ENST00000413963 PTPRFP10586 1907 aa12.52□□□□□ -0.41
AP001888.1-201ENST00000413963 DDAH1O94760 285 aa12.51□□□□□ -0.41
AP001888.1-201ENST00000413963 NDUFB10O96000 172 aa12.51□□□□□ -0.41
AP001888.1-201ENST00000413963 SLC1A4P43007 532 aa12.51□□□□□ -0.41
AP001888.1-201ENST00000413963 MCM2P49736 904 aa12.51□□□□□ -0.41
AP001888.1-201ENST00000413963 RCAN1P53805 252 aa12.51□□□□□ -0.41
AP001888.1-201ENST00000413963 PPP2R5BQ15173 497 aa12.51□□□□□ -0.41
AP001888.1-201ENST00000413963 GPATCH4Q5T3I0 446 aaKnown RBP12.51□□□□□ -0.41
AP001888.1-201ENST00000413963 ZNF654Q8IZM8 581 aa12.51□□□□□ -0.41
AP001888.1-201ENST00000413963 BRF1Q92994 677 aa12.51□□□□□ -0.41
AP001888.1-201ENST00000413963 TCEANC2Q96MN5 208 aa12.51□□□□□ -0.41
AP001888.1-201ENST00000413963 KIF2CQ99661 725 aa12.51□□□□□ -0.41
AP001888.1-201ENST00000413963 EMILIN3Q9NT22 766 aa12.51□□□□□ -0.41
AP001888.1-201ENST00000413963 PNMA3Q9UL41 463 aa12.51□□□□□ -0.41
AP001888.1-201ENST00000413963 AGTPBP1Q9UPW5 1226 aa12.51□□□□□ -0.41
AP001888.1-201ENST00000413963 SLC45A1Q9Y2W3 748 aa12.51□□□□□ -0.41
AP001888.1-201ENST00000413963 LOC285556D6RIA3 1793 aa12.51□□□□□ -0.41
AP001888.1-201ENST00000413963 KLF18A0A0U1RQI7 1052 aa12.5□□□□□ -0.41
AP001888.1-201ENST00000413963 USP17L15C9J2P7 530 aa12.5□□□□□ -0.41
AP001888.1-201ENST00000413963 USP17L13C9JLJ4 530 aa12.5□□□□□ -0.41
AP001888.1-201ENST00000413963 USP17L11C9JVI0 530 aa12.5□□□□□ -0.41
AP001888.1-201ENST00000413963 USP17L18D6R9N7 530 aa12.5□□□□□ -0.41
AP001888.1-201ENST00000413963 USP17L22D6RA61 530 aa12.5□□□□□ -0.41
AP001888.1-201ENST00000413963 USP17L17D6RBQ6 530 aa12.5□□□□□ -0.41
AP001888.1-201ENST00000413963 USP17L19D6RCP7 530 aa12.5□□□□□ -0.41
AP001888.1-201ENST00000413963 USP17L20D6RJB6 530 aa12.5□□□□□ -0.41
AP001888.1-201ENST00000413963 ZBTB43O43298 467 aa12.5□□□□□ -0.41
AP001888.1-201ENST00000413963 ALDH1A1P00352 501 aa12.5□□□□□ -0.41
AP001888.1-201ENST00000413963 PARP1P09874 1014 aaKnown RBP12.5□□□□□ -0.41
AP001888.1-201ENST00000413963 BMP3P12645 472 aa12.5□□□□□ -0.41
AP001888.1-201ENST00000413963 VCAM1P19320 739 aa12.5□□□□□ -0.41
AP001888.1-201ENST00000413963 OSBPP22059 807 aa12.5□□□□□ -0.41
AP001888.1-201ENST00000413963 KIF5BP33176 963 aa12.5□□□□□ -0.41
AP001888.1-201ENST00000413963 TM4SF4P48230 202 aa12.5□□□□□ -0.41
AP001888.1-201ENST00000413963 VEGFBP49765 207 aa12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms