RNA–Protein interactions for RNA: ENST00000413899.1

HMGB1P11-201, Transcript of high mobility group box 1 pseudogene 11, humanhuman

BASIC

Gene HMGB1P11, Length 637 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P11-201ENST00000413899 SPACA3Q8IXA5 215 aa6.02□□□□□ -1.45
HMGB1P11-201ENST00000413899 NETO1Q8TDF5 533 aa6.02□□□□□ -1.45
HMGB1P11-201ENST00000413899 SMARCC1Q92922 1105 aaPredicted RBP6.02□□□□□ -1.45
HMGB1P11-201ENST00000413899 Q96M66 194 aa6.02□□□□□ -1.45
HMGB1P11-201ENST00000413899 ACTR10Q9NZ32 417 aa6.02□□□□□ -1.45
HMGB1P11-201ENST00000413899 SNX11Q9Y5W9 270 aa6.02□□□□□ -1.45
HMGB1P11-201ENST00000413899 TMEM265A0A087WTH1 108 aa6.01□□□□□ -1.45
HMGB1P11-201ENST00000413899 KLF4O43474 513 aa6.01□□□□□ -1.45
HMGB1P11-201ENST00000413899 STK10O94804 968 aaKnown RBP6.01□□□□□ -1.45
HMGB1P11-201ENST00000413899 CBX7O95931 251 aa6.01□□□□□ -1.45
HMGB1P11-201ENST00000413899 PRNPP04156 253 aa6.01□□□□□ -1.45
HMGB1P11-201ENST00000413899 SPINK2P20155 84 aa6.01□□□□□ -1.45
HMGB1P11-201ENST00000413899 CHMP4BP1P59074 171 aa6.01□□□□□ -1.45
HMGB1P11-201ENST00000413899 IFI16Q16666 785 aaKnown RBP6.01□□□□□ -1.45
HMGB1P11-201ENST00000413899 ANKRD39Q53RE8 183 aa6.01□□□□□ -1.45
HMGB1P11-201ENST00000413899 NBPF6Q5VWK0 638 aa6.01□□□□□ -1.45
HMGB1P11-201ENST00000413899 ARHGAP27Q6ZUM4 889 aa6.01□□□□□ -1.45
HMGB1P11-201ENST00000413899 DTX1Q86Y01 620 aa6.01□□□□□ -1.45
HMGB1P11-201ENST00000413899 DTWD2Q8NBA8 298 aa6.01□□□□□ -1.45
HMGB1P11-201ENST00000413899 NBPF4Q96M43 638 aa6.01□□□□□ -1.45
HMGB1P11-201ENST00000413899 DRC1Q96MC2 740 aa6.01□□□□□ -1.45
HMGB1P11-201ENST00000413899 HIRIP3Q9BW71 556 aaPredicted RBP6.01□□□□□ -1.45
HMGB1P11-201ENST00000413899 BSDC1Q9NW68 430 aaPredicted RBP6.01□□□□□ -1.45
HMGB1P11-201ENST00000413899 KCNH3Q9ULD8 1083 aa6.01□□□□□ -1.45
HMGB1P11-201ENST00000413899 FAM155AB1AL88 458 aaPredicted RBP6□□□□□ -1.45
HMGB1P11-201ENST00000413899 MED26O95402 600 aa6□□□□□ -1.45
HMGB1P11-201ENST00000413899 SRFP11831 508 aa6□□□□□ -1.45
HMGB1P11-201ENST00000413899 TNK2Q07912 1038 aa6□□□□□ -1.45
HMGB1P11-201ENST00000413899 PPP2R5EQ16537 467 aa6□□□□□ -1.45
HMGB1P11-201ENST00000413899 NBPF9Q3BBW0 867 aa6□□□□□ -1.45
HMGB1P11-201ENST00000413899 ANKS3Q6ZW76 656 aa6□□□□□ -1.45
HMGB1P11-201ENST00000413899 THAP5Q7Z6K1 395 aa6□□□□□ -1.45
HMGB1P11-201ENST00000413899 PPFIBP1Q86W92 1011 aa6□□□□□ -1.45
HMGB1P11-201ENST00000413899 PLD6Q8N2A8 252 aaKnown RBP6□□□□□ -1.45
HMGB1P11-201ENST00000413899 MISP3Q96FF7 219 aa6□□□□□ -1.45
HMGB1P11-201ENST00000413899 GPR62Q9BZJ7 368 aa6□□□□□ -1.45
HMGB1P11-201ENST00000413899 ST14Q9Y5Y6 855 aa6□□□□□ -1.45
HMGB1P11-201ENST00000413899 FAM86C2PA6NEL3 165 aa5.99□□□□□ -1.45
HMGB1P11-201ENST00000413899 C9IYK1 514 aa5.99□□□□□ -1.45
HMGB1P11-201ENST00000413899 LRRN2O75325 713 aa5.99□□□□□ -1.45
HMGB1P11-201ENST00000413899 ITIH2P19823 946 aa5.99□□□□□ -1.45
HMGB1P11-201ENST00000413899 GTF2F1P35269 517 aaKnown RBP eCLIP5.99□□□□□ -1.45
HMGB1P11-201ENST00000413899 SLC7A5Q01650 507 aa5.99□□□□□ -1.45
HMGB1P11-201ENST00000413899 CKAP2LQ8IYA6 745 aa5.99□□□□□ -1.45
HMGB1P11-201ENST00000413899 KLHL6Q8WZ60 621 aa5.99□□□□□ -1.45
HMGB1P11-201ENST00000413899 UBXN4Q92575 508 aa5.99□□□□□ -1.45
HMGB1P11-201ENST00000413899 DHX38Q92620 1227 aaKnown RBP5.99□□□□□ -1.45
HMGB1P11-201ENST00000413899 PRR13Q9NZ81 148 aa5.99□□□□□ -1.45
HMGB1P11-201ENST00000413899 VAV3Q9UKW4 847 aa5.99□□□□□ -1.45
HMGB1P11-201ENST00000413899 SHOXO15266 292 aa5.98□□□□□ -1.45
HMGB1P11-201ENST00000413899 PRKCQQ04759 706 aa5.98□□□□□ -1.45
HMGB1P11-201ENST00000413899 AUHQ13825 339 aaKnown RBP5.98□□□□□ -1.45
HMGB1P11-201ENST00000413899 RAB33AQ14088 237 aa5.98□□□□□ -1.45
HMGB1P11-201ENST00000413899 NCAPHQ15003 741 aa5.98□□□□□ -1.45
HMGB1P11-201ENST00000413899 FXNQ16595 210 aa5.98□□□□□ -1.45
HMGB1P11-201ENST00000413899 ZMYM1Q5SVZ6 1142 aa5.98□□□□□ -1.45
HMGB1P11-201ENST00000413899 SOGA3Q5TF21 947 aa5.98□□□□□ -1.45
HMGB1P11-201ENST00000413899 STK11IPQ8N1F8 1099 aa5.98□□□□□ -1.45
HMGB1P11-201ENST00000413899 ENOX1Q8TC92 643 aaKnown RBP5.98□□□□□ -1.45
HMGB1P11-201ENST00000413899 HNRNPLLQ8WVV9 542 aaKnown RBP5.98□□□□□ -1.45
HMGB1P11-201ENST00000413899 ZNF512BQ96KM6 892 aaPredicted RBP5.98□□□□□ -1.45
HMGB1P11-201ENST00000413899 MKRN2Q9H000 416 aaKnown RBP5.98□□□□□ -1.45
HMGB1P11-201ENST00000413899 DUSP15Q9H1R2 295 aaPredicted RBP5.98□□□□□ -1.45
HMGB1P11-201ENST00000413899 SEMA3GQ9NS98 782 aa5.98□□□□□ -1.45
HMGB1P11-201ENST00000413899 PITPNM2Q9BZ72 1349 aa5.98□□□□□ -1.45
HMGB1P11-201ENST00000413899 RBAK-RBAKDNI3L0D1 243 aa5.97□□□□□ -1.45
HMGB1P11-201ENST00000413899 LRP8Q14114 963 aa5.97□□□□□ -1.45
HMGB1P11-201ENST00000413899 GNPTABQ3T906 1256 aa5.97□□□□□ -1.45
HMGB1P11-201ENST00000413899 AXDND1Q5T1B0 1012 aaPredicted RBP5.97□□□□□ -1.45
HMGB1P11-201ENST00000413899 TDRD10Q5VZ19 366 aaKnown RBP5.97□□□□□ -1.45
HMGB1P11-201ENST00000413899 VHLLQ6RSH7 139 aa5.97□□□□□ -1.45
HMGB1P11-201ENST00000413899 VSIG10LQ86VR7 867 aa5.97□□□□□ -1.45
HMGB1P11-201ENST00000413899 CCDC144CPQ8IYA2 1237 aa5.97□□□□□ -1.45
HMGB1P11-201ENST00000413899 C7orf61Q8IZ16 206 aa5.97□□□□□ -1.45
HMGB1P11-201ENST00000413899 HRASLS5Q96KN8 279 aa5.97□□□□□ -1.45
HMGB1P11-201ENST00000413899 HSPA12BQ96MM6 686 aa5.97□□□□□ -1.45
HMGB1P11-201ENST00000413899 TRIT1Q9H3H1 467 aaKnown RBP5.97□□□□□ -1.45
HMGB1P11-201ENST00000413899 GPATCH2Q9NW75 528 aa5.97□□□□□ -1.45
HMGB1P11-201ENST00000413899 CBFA2T2O43439 604 aa5.96□□□□□ -1.46
HMGB1P11-201ENST00000413899 SSTR4P31391 388 aa5.96□□□□□ -1.46
HMGB1P11-201ENST00000413899 SERINC3Q13530 473 aa5.96□□□□□ -1.46
HMGB1P11-201ENST00000413899 DDR2Q16832 855 aa5.96□□□□□ -1.46
HMGB1P11-201ENST00000413899 GAB4Q2WGN9 574 aa5.96□□□□□ -1.46
HMGB1P11-201ENST00000413899 FAM178BQ8IXR5 827 aa5.96□□□□□ -1.46
HMGB1P11-201ENST00000413899 CELF2-AS1Q8N7Q2 184 aa5.96□□□□□ -1.46
HMGB1P11-201ENST00000413899 BCL7CQ8WUZ0 217 aaPredicted RBP5.96□□□□□ -1.46
HMGB1P11-201ENST00000413899 ASB11Q8WXH4 323 aa5.96□□□□□ -1.46
HMGB1P11-201ENST00000413899 HAUS7Q99871 368 aa5.96□□□□□ -1.46
HMGB1P11-201ENST00000413899 PRDM14Q9GZV8 571 aa5.96□□□□□ -1.46
HMGB1P11-201ENST00000413899 KLHL25Q9H0H3 589 aa5.96□□□□□ -1.46
HMGB1P11-201ENST00000413899 SUSD2Q9UGT4 822 aa5.96□□□□□ -1.46
HMGB1P11-201ENST00000413899 PCDHB10Q9UN67 800 aa5.96□□□□□ -1.46
HMGB1P11-201ENST00000413899 R3HCC1Q9Y3T6 440 aaKnown RBP5.96□□□□□ -1.46
HMGB1P11-201ENST00000413899 PCDHB12Q9Y5F1 795 aa5.96□□□□□ -1.46
HMGB1P11-201ENST00000413899 A0A087WZG4 1122 aa5.95□□□□□ -1.46
HMGB1P11-201ENST00000413899 H3BS24 57 aa5.95□□□□□ -1.46
HMGB1P11-201ENST00000413899 TP53P04637 393 aaPredicted RBP5.95□□□□□ -1.46
HMGB1P11-201ENST00000413899 ZNF143P52747 638 aaPredicted RBP5.95□□□□□ -1.46
HMGB1P11-201ENST00000413899 NMIQ13287 307 aaPredicted RBP5.95□□□□□ -1.46
HMGB1P11-201ENST00000413899 AOC3Q16853 763 aa5.95□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms