RNA–Protein interactions for RNA: ENST00000413872.6

PHRF1-202, Transcript of PHD and ring finger domains 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PHRF1, Length 5,224 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHRF1-202ENST00000413872 GCNT3O95395 438 aa19.24■□□□□ 0.67
PHRF1-202ENST00000413872 NPR1P16066 1061 aa19.24■□□□□ 0.67
PHRF1-202ENST00000413872 PTH1RQ03431 593 aa19.24■□□□□ 0.67
PHRF1-202ENST00000413872 CALCOCO2Q13137 446 aa19.24■□□□□ 0.67
PHRF1-202ENST00000413872 ASPRV1Q53RT3 343 aa19.24■□□□□ 0.67
PHRF1-202ENST00000413872 LZTFL1Q9NQ48 299 aa19.24■□□□□ 0.67
PHRF1-202ENST00000413872 TUBB2AQ13885 445 aa19.23■□□□□ 0.67
PHRF1-202ENST00000413872 ADALQ6DHV7 355 aa19.23■□□□□ 0.67
PHRF1-202ENST00000413872 PAGR1Q9BTK6 254 aa19.23■□□□□ 0.67
PHRF1-202ENST00000413872 TUBB2BQ9BVA1 445 aa19.23■□□□□ 0.67
PHRF1-202ENST00000413872 PCDHB13Q9Y5F0 798 aa19.23■□□□□ 0.67
PHRF1-202ENST00000413872 BCRP11274 1271 aa19.23■□□□□ 0.67
PHRF1-202ENST00000413872 VAV2P52735 878 aa19.23■□□□□ 0.67
PHRF1-202ENST00000413872 USP14P54578 494 aa19.23■□□□□ 0.67
PHRF1-202ENST00000413872 YWHAEP62258 255 aaKnown RBP19.23■□□□□ 0.67
PHRF1-202ENST00000413872 SLC9C1Q4G0N8 1177 aa19.23■□□□□ 0.67
PHRF1-202ENST00000413872 NSRP1Q9H0G5 558 aaKnown RBP19.23■□□□□ 0.67
PHRF1-202ENST00000413872 DHX36Q9H2U1 1008 aaKnown RBP19.23■□□□□ 0.67
PHRF1-202ENST00000413872 OTUD6BQ8N6M0 293 aa19.23■□□□□ 0.67
PHRF1-202ENST00000413872 RNF216Q9NWF9 866 aaPredicted RBP19.23■□□□□ 0.67
PHRF1-202ENST00000413872 ERICH4A6NGS2 130 aa19.23■□□□□ 0.67
PHRF1-202ENST00000413872 RPS6KA4O75676 772 aa19.23■□□□□ 0.67
PHRF1-202ENST00000413872 ARHGEF6Q15052 776 aa19.23■□□□□ 0.67
PHRF1-202ENST00000413872 FAM173BQ6P4H8 233 aa19.22■□□□□ 0.67
PHRF1-202ENST00000413872 DYMQ7RTS9 669 aa19.22■□□□□ 0.67
PHRF1-202ENST00000413872 GOLGA5Q8TBA6 731 aa19.22■□□□□ 0.67
PHRF1-202ENST00000413872 TXNDC16Q9P2K2 825 aa19.22■□□□□ 0.67
PHRF1-202ENST00000413872 ADCY9O60503 1353 aa19.22■□□□□ 0.67
PHRF1-202ENST00000413872 CCNA1P78396 465 aa19.22■□□□□ 0.67
PHRF1-202ENST00000413872 FANCCQ00597 558 aa19.22■□□□□ 0.67
PHRF1-202ENST00000413872 SEC62Q99442 399 aaKnown RBP19.22■□□□□ 0.67
PHRF1-202ENST00000413872 SPOPO43791 374 aa19.22■□□□□ 0.67
PHRF1-202ENST00000413872 P4HA1P13674 534 aa19.22■□□□□ 0.67
PHRF1-202ENST00000413872 TPH2Q8IWU9 490 aa19.22■□□□□ 0.67
PHRF1-202ENST00000413872 DEPTORQ8TB45 409 aa19.22■□□□□ 0.67
PHRF1-202ENST00000413872 MAP4K1Q92918 833 aa19.22■□□□□ 0.67
PHRF1-202ENST00000413872 PCDHA12Q9UN75 941 aa19.22■□□□□ 0.67
PHRF1-202ENST00000413872 GRAPQ13588 217 aa19.22■□□□□ 0.67
PHRF1-202ENST00000413872 LRRC47Q8N1G4 583 aaKnown RBP19.22■□□□□ 0.67
PHRF1-202ENST00000413872 GRAPLQ8TC17 118 aaPredicted RBP19.22■□□□□ 0.67
PHRF1-202ENST00000413872 GAS8O95995 478 aa19.21■□□□□ 0.67
PHRF1-202ENST00000413872 ADORA1P30542 326 aa19.21■□□□□ 0.67
PHRF1-202ENST00000413872 KARSQ15046 597 aaKnown RBP19.21■□□□□ 0.67
PHRF1-202ENST00000413872 RTKN2Q8IZC4 609 aa19.21■□□□□ 0.67
PHRF1-202ENST00000413872 ANKRD35Q8N283 1001 aa19.21■□□□□ 0.67
PHRF1-202ENST00000413872 TTC14Q96N46 770 aa19.21■□□□□ 0.67
PHRF1-202ENST00000413872 IMPACTQ9P2X3 320 aa19.21■□□□□ 0.67
PHRF1-202ENST00000413872 hCG_1642624A0A1W2PR95 340 aa19.21■□□□□ 0.67
PHRF1-202ENST00000413872 TESPA1A2RU30 521 aaPredicted RBP19.21■□□□□ 0.67
PHRF1-202ENST00000413872 FLOT1O75955 427 aa19.21■□□□□ 0.67
PHRF1-202ENST00000413872 PPP1R7Q15435 360 aa19.21■□□□□ 0.67
PHRF1-202ENST00000413872 CCDC26Q8TAB7 109 aa19.21■□□□□ 0.67
PHRF1-202ENST00000413872 AMNQ9BXJ7 453 aa19.21■□□□□ 0.67
PHRF1-202ENST00000413872 BRD1O95696 1058 aa19.21■□□□□ 0.67
PHRF1-202ENST00000413872 GADL1Q6ZQY3 521 aa19.21■□□□□ 0.67
PHRF1-202ENST00000413872 ZBTB8OSQ8IWT0 167 aa19.21■□□□□ 0.67
PHRF1-202ENST00000413872 OR52Z1P0C646 297 aa19.21■□□□□ 0.67
PHRF1-202ENST00000413872 NFE2L3Q9Y4A8 694 aa19.21■□□□□ 0.67
PHRF1-202ENST00000413872 PLCD4Q9BRC7 762 aa19.2■□□□□ 0.66
PHRF1-202ENST00000413872 MAPK8IP1Q9UQF2 711 aa19.2■□□□□ 0.66
PHRF1-202ENST00000413872 hCG_1984214I3L0E3 225 aa19.2■□□□□ 0.66
PHRF1-202ENST00000413872 C6orf163Q5TEZ5 329 aa19.2■□□□□ 0.66
PHRF1-202ENST00000413872 TMTC1Q8IUR5 882 aa19.2■□□□□ 0.66
PHRF1-202ENST00000413872 ZNF713Q8N859 430 aaPredicted RBP19.2■□□□□ 0.66
PHRF1-202ENST00000413872 TTC16Q8NEE8 873 aa19.2■□□□□ 0.66
PHRF1-202ENST00000413872 CSRNP1Q96S65 589 aa19.2■□□□□ 0.66
PHRF1-202ENST00000413872 KANSL2Q9H9L4 492 aa19.2■□□□□ 0.66
PHRF1-202ENST00000413872 CPSF1Q10570 1443 aaKnown RBP19.2■□□□□ 0.66
PHRF1-202ENST00000413872 TMEM232C9JQI7 657 aa19.2■□□□□ 0.66
PHRF1-202ENST00000413872 ADRA2BP18089 450 aa19.2■□□□□ 0.66
PHRF1-202ENST00000413872 MAEAQ7L5Y9 396 aa19.2■□□□□ 0.66
PHRF1-202ENST00000413872 TEKT3Q9BXF9 490 aa19.2■□□□□ 0.66
PHRF1-202ENST00000413872 MRPS9P82933 396 aaKnown RBP19.2■□□□□ 0.66
PHRF1-202ENST00000413872 RNF187Q5TA31 235 aaPredicted RBP19.2■□□□□ 0.66
PHRF1-202ENST00000413872 FRMPD2Q68DX3 1309 aaPredicted RBP19.2■□□□□ 0.66
PHRF1-202ENST00000413872 NELFBQ8WX92 580 aa19.19■□□□□ 0.66
PHRF1-202ENST00000413872 ADD2P35612 726 aa19.19■□□□□ 0.66
PHRF1-202ENST00000413872 CLUL1Q15846 466 aa19.19■□□□□ 0.66
PHRF1-202ENST00000413872 PRR16Q569H4 304 aa19.19■□□□□ 0.66
PHRF1-202ENST00000413872 UBL4BQ8N7F7 174 aa19.19■□□□□ 0.66
PHRF1-202ENST00000413872 PPP1R9BQ96SB3 815 aa19.19■□□□□ 0.66
PHRF1-202ENST00000413872 SEC31BQ9NQW1 1179 aa19.19■□□□□ 0.66
PHRF1-202ENST00000413872 BSDC1Q9NW68 430 aaPredicted RBP19.19■□□□□ 0.66
PHRF1-202ENST00000413872 TTLL1O95922 423 aa19.19■□□□□ 0.66
PHRF1-202ENST00000413872 CBX1P83916 185 aa19.19■□□□□ 0.66
PHRF1-202ENST00000413872 CCPG1Q9ULG6 757 aa19.18■□□□□ 0.66
PHRF1-202ENST00000413872 AGTPBP1Q9UPW5 1226 aa19.18■□□□□ 0.66
PHRF1-202ENST00000413872 FAM169AQ9Y6X4 670 aa19.18■□□□□ 0.66
PHRF1-202ENST00000413872 ADD1P35611 737 aaKnown RBP19.18■□□□□ 0.66
PHRF1-202ENST00000413872 COA1Q9GZY4 146 aa19.18■□□□□ 0.66
PHRF1-202ENST00000413872 PCDHA1Q9Y5I3 950 aa19.18■□□□□ 0.66
PHRF1-202ENST00000413872 TNS3Q68CZ2 1445 aa19.18■□□□□ 0.66
PHRF1-202ENST00000413872 TRAPPC10P48553 1259 aa19.18■□□□□ 0.66
PHRF1-202ENST00000413872 FNBP4Q8N3X1 1017 aaPredicted RBP19.18■□□□□ 0.66
PHRF1-202ENST00000413872 RNF26Q9BY78 433 aaPredicted RBP19.18■□□□□ 0.66
PHRF1-202ENST00000413872 MAGEF1Q9HAY2 307 aa19.18■□□□□ 0.66
PHRF1-202ENST00000413872 SERPINB13Q9UIV8 391 aa19.18■□□□□ 0.66
PHRF1-202ENST00000413872 RPAP1Q9BWH6 1393 aaPredicted RBP19.18■□□□□ 0.66
PHRF1-202ENST00000413872 ARFGAP2Q8N6H7 521 aa19.18■□□□□ 0.66
PHRF1-202ENST00000413872 LARSQ9P2J5 1176 aaKnown RBP19.18■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms