RNA–Protein interactions for RNA: ENST00000413333.1

HMGB3P31-201, Transcript of high mobility group box 3 pseudogene 31, humanhuman

BASIC

Gene HMGB3P31, Length 595 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P31-201ENST00000413333 AKTIPQ9H8T0 292 aa6.77□□□□□ -1.33
HMGB3P31-201ENST00000413333 PCDH12Q9NPG4 1184 aa6.77□□□□□ -1.33
HMGB3P31-201ENST00000413333 SUSD2Q9UGT4 822 aa6.77□□□□□ -1.33
HMGB3P31-201ENST00000413333 CEP131Q9UPN4 1083 aa6.77□□□□□ -1.33
HMGB3P31-201ENST00000413333 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP6.76□□□□□ -1.33
HMGB3P31-201ENST00000413333 ARHGEF15O94989 841 aa6.76□□□□□ -1.33
HMGB3P31-201ENST00000413333 MASP1P48740 699 aa6.76□□□□□ -1.33
HMGB3P31-201ENST00000413333 ZNF143P52747 638 aaPredicted RBP6.76□□□□□ -1.33
HMGB3P31-201ENST00000413333 LONRF2Q1L5Z9 754 aa6.76□□□□□ -1.33
HMGB3P31-201ENST00000413333 FOXB2Q5VYV0 432 aa6.76□□□□□ -1.33
HMGB3P31-201ENST00000413333 CDPF1Q6NVV7 123 aa6.76□□□□□ -1.33
HMGB3P31-201ENST00000413333 TMEM130Q8N3G9 435 aa6.76□□□□□ -1.33
HMGB3P31-201ENST00000413333 PPP1R13LQ8WUF5 828 aa6.76□□□□□ -1.33
HMGB3P31-201ENST00000413333 IPO9Q96P70 1041 aaKnown RBP6.76□□□□□ -1.33
HMGB3P31-201ENST00000413333 GBP3Q9H0R5 595 aa6.76□□□□□ -1.33
HMGB3P31-201ENST00000413333 NOP53Q9NZM5 478 aaKnown RBP6.76□□□□□ -1.33
HMGB3P31-201ENST00000413333 APEX2Q9UBZ4 518 aa6.76□□□□□ -1.33
HMGB3P31-201ENST00000413333 TRAV20A0A0B4J274 112 aa6.75□□□□□ -1.33
HMGB3P31-201ENST00000413333 CBFA2T2O43439 604 aa6.75□□□□□ -1.33
HMGB3P31-201ENST00000413333 NFICP08651 508 aa6.75□□□□□ -1.33
HMGB3P31-201ENST00000413333 HSP90AA2PQ14568 343 aaPredicted RBP6.75□□□□□ -1.33
HMGB3P31-201ENST00000413333 DALRD3Q5D0E6 543 aaKnown RBP6.75□□□□□ -1.33
HMGB3P31-201ENST00000413333 FAM209AQ5JX71 171 aa6.75□□□□□ -1.33
HMGB3P31-201ENST00000413333 NBPF12Q5TAG4 269 aaPredicted RBP6.75□□□□□ -1.33
HMGB3P31-201ENST00000413333 LETMD1Q6P1Q0 360 aa6.75□□□□□ -1.33
HMGB3P31-201ENST00000413333 DHX37Q8IY37 1157 aaKnown RBP6.75□□□□□ -1.33
HMGB3P31-201ENST00000413333 SYNPOQ8N3V7 929 aa6.75□□□□□ -1.33
HMGB3P31-201ENST00000413333 ADCY4Q8NFM4 1077 aa6.75□□□□□ -1.33
HMGB3P31-201ENST00000413333 RIN3Q8TB24 985 aa6.75□□□□□ -1.33
HMGB3P31-201ENST00000413333 FBLIM1Q8WUP2 373 aa6.75□□□□□ -1.33
HMGB3P31-201ENST00000413333 KREMEN1Q96MU8 473 aa6.75□□□□□ -1.33
HMGB3P31-201ENST00000413333 BRINP2Q9C0B6 783 aa6.75□□□□□ -1.33
HMGB3P31-201ENST00000413333 KLHL25Q9H0H3 589 aa6.75□□□□□ -1.33
HMGB3P31-201ENST00000413333 ACSS3Q9H6R3 686 aa6.75□□□□□ -1.33
HMGB3P31-201ENST00000413333 FBXL21Q9UKT6 434 aa6.75□□□□□ -1.33
HMGB3P31-201ENST00000413333 ZNF451Q9Y4E5 1061 aa6.75□□□□□ -1.33
HMGB3P31-201ENST00000413333 PPM1BO75688 479 aa6.74□□□□□ -1.33
HMGB3P31-201ENST00000413333 ITGAVP06756 1048 aa6.74□□□□□ -1.33
HMGB3P31-201ENST00000413333 RXRBP28702 533 aa6.74□□□□□ -1.33
HMGB3P31-201ENST00000413333 PPP2R2AP63151 447 aa6.74□□□□□ -1.33
HMGB3P31-201ENST00000413333 CBX2Q14781 532 aaPredicted RBP6.74□□□□□ -1.33
HMGB3P31-201ENST00000413333 ZC3H12BQ5HYM0 836 aaKnown RBP6.74□□□□□ -1.33
HMGB3P31-201ENST00000413333 YOD1Q5VVQ6 348 aaPredicted RBP6.74□□□□□ -1.33
HMGB3P31-201ENST00000413333 PODNQ7Z5L7 613 aa6.74□□□□□ -1.33
HMGB3P31-201ENST00000413333 C7orf61Q8IZ16 206 aa6.74□□□□□ -1.33
HMGB3P31-201ENST00000413333 ZNF775Q96BV0 537 aaPredicted RBP6.74□□□□□ -1.33
HMGB3P31-201ENST00000413333 EXOC2Q96KP1 924 aa6.74□□□□□ -1.33
HMGB3P31-201ENST00000413333 AARSD1Q9BTE6 412 aaKnown RBP6.74□□□□□ -1.33
HMGB3P31-201ENST00000413333 YIPF2Q9BWQ6 316 aa6.74□□□□□ -1.33
HMGB3P31-201ENST00000413333 CEP41Q9BYV8 373 aa6.74□□□□□ -1.33
HMGB3P31-201ENST00000413333 ARHGEF4Q9NR80 690 aa6.74□□□□□ -1.33
HMGB3P31-201ENST00000413333 TRBV23-1A0A0A0MS06 115 aa6.73□□□□□ -1.33
HMGB3P31-201ENST00000413333 CCDC163A0A0D9SF12 145 aa6.73□□□□□ -1.33
HMGB3P31-201ENST00000413333 NOP56O00567 594 aaKnown RBP6.73□□□□□ -1.33
HMGB3P31-201ENST00000413333 RAB11FIP3O75154 756 aa6.73□□□□□ -1.33
HMGB3P31-201ENST00000413333 CD247P20963 164 aa6.73□□□□□ -1.33
HMGB3P31-201ENST00000413333 IREB2P48200 963 aaKnown RBP6.73□□□□□ -1.33
HMGB3P31-201ENST00000413333 RNF4P78317 190 aa6.73□□□□□ -1.33
HMGB3P31-201ENST00000413333 AUHQ13825 339 aaKnown RBP6.73□□□□□ -1.33
HMGB3P31-201ENST00000413333 SGO2Q562F6 1265 aa6.73□□□□□ -1.33
HMGB3P31-201ENST00000413333 ZNF227Q86WZ6 799 aa6.73□□□□□ -1.33
HMGB3P31-201ENST00000413333 DNAJB8Q8NHS0 232 aa6.73□□□□□ -1.33
HMGB3P31-201ENST00000413333 DHRS4Q9BTZ2 278 aa6.73□□□□□ -1.33
HMGB3P31-201ENST00000413333 SEMA6CQ9H3T2 930 aa6.73□□□□□ -1.33
HMGB3P31-201ENST00000413333 PLAAQ9Y263 795 aa6.73□□□□□ -1.33
HMGB3P31-201ENST00000413333 CNTNAP5Q8WYK1 1306 aa6.73□□□□□ -1.33
HMGB3P31-201ENST00000413333 KRBA1A5PL33 1030 aa6.72□□□□□ -1.33
HMGB3P31-201ENST00000413333 IRS4O14654 1257 aaPredicted RBP6.72□□□□□ -1.33
HMGB3P31-201ENST00000413333 PRODHO43272 600 aa6.72□□□□□ -1.33
HMGB3P31-201ENST00000413333 SLITRK5O94991 958 aa6.72□□□□□ -1.33
HMGB3P31-201ENST00000413333 RAPGEF3O95398 923 aa6.72□□□□□ -1.33
HMGB3P31-201ENST00000413333 APBA3O96018 575 aa6.72□□□□□ -1.33
HMGB3P31-201ENST00000413333 ITGA4P13612 1032 aa6.72□□□□□ -1.33
HMGB3P31-201ENST00000413333 CNGA1P29973 690 aa6.72□□□□□ -1.33
HMGB3P31-201ENST00000413333 AMPD3Q01432 767 aa6.72□□□□□ -1.33
HMGB3P31-201ENST00000413333 PABPC4Q13310 644 aaKnown RBP eCLIP6.72□□□□□ -1.33
HMGB3P31-201ENST00000413333 NOL9Q5SY16 702 aaKnown RBP6.72□□□□□ -1.33
HMGB3P31-201ENST00000413333 NIM1KQ8IY84 436 aa6.72□□□□□ -1.33
HMGB3P31-201ENST00000413333 BVESQ8NE79 360 aa6.72□□□□□ -1.33
HMGB3P31-201ENST00000413333 BRF1Q92994 677 aa6.72□□□□□ -1.33
HMGB3P31-201ENST00000413333 LENG1Q96BZ8 264 aaPredicted RBP6.72□□□□□ -1.33
HMGB3P31-201ENST00000413333 TMX1Q9H3N1 280 aa6.72□□□□□ -1.33
HMGB3P31-201ENST00000413333 GP6Q9HCN6 339 aa6.72□□□□□ -1.33
HMGB3P31-201ENST00000413333 PRDM10Q9NQV6 1147 aa6.72□□□□□ -1.33
HMGB3P31-201ENST00000413333 WHRNQ9P202 907 aa6.72□□□□□ -1.33
HMGB3P31-201ENST00000413333 AKT3Q9Y243 479 aa6.72□□□□□ -1.33
HMGB3P31-201ENST00000413333 MRPS23Q9Y3D9 190 aaKnown RBP6.72□□□□□ -1.33
HMGB3P31-201ENST00000413333 C9orf172C9J069 976 aa6.71□□□□□ -1.34
HMGB3P31-201ENST00000413333 RBAK-RBAKDNI3L0D1 243 aa6.71□□□□□ -1.34
HMGB3P31-201ENST00000413333 DYNC1LI2O43237 492 aaPredicted RBP6.71□□□□□ -1.34
HMGB3P31-201ENST00000413333 TBX1O43435 398 aa6.71□□□□□ -1.34
HMGB3P31-201ENST00000413333 SPATA31C1P0DKV0 1188 aa6.71□□□□□ -1.34
HMGB3P31-201ENST00000413333 MYCLP1P12525 358 aaPredicted RBP6.71□□□□□ -1.34
HMGB3P31-201ENST00000413333 NOS3P29474 1203 aa6.71□□□□□ -1.34
HMGB3P31-201ENST00000413333 ETV3P41162 512 aa6.71□□□□□ -1.34
HMGB3P31-201ENST00000413333 CDK5R2Q13319 367 aa6.71□□□□□ -1.34
HMGB3P31-201ENST00000413333 MAP7Q14244 749 aa6.71□□□□□ -1.34
HMGB3P31-201ENST00000413333 PPP2R5DQ14738 602 aa6.71□□□□□ -1.34
HMGB3P31-201ENST00000413333 ANKRD39Q53RE8 183 aa6.71□□□□□ -1.34
HMGB3P31-201ENST00000413333 TREML4Q6UXN2 200 aa6.71□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms