RNA–Protein interactions for RNA: ENST00000411849.1

HMGN1P20-201, Transcript of high mobility group nucleosome binding domain 1 pseudogene 20, humanhuman

BASIC

Gene HMGN1P20, Length 300 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P20-201ENST00000411849 PLA2G5P39877 138 aa7.37□□□□□ -1.23
HMGN1P20-201ENST00000411849 JAG1P78504 1218 aa7.37□□□□□ -1.23
HMGN1P20-201ENST00000411849 TFCP2Q12800 502 aa7.37□□□□□ -1.23
HMGN1P20-201ENST00000411849 OLFML2BQ68BL8 750 aa7.37□□□□□ -1.23
HMGN1P20-201ENST00000411849 NAA16Q6N069 864 aaPredicted RBP7.37□□□□□ -1.23
HMGN1P20-201ENST00000411849 POTEEQ6S8J3 1075 aa7.37□□□□□ -1.23
HMGN1P20-201ENST00000411849 LBX2Q6XYB7 198 aa7.37□□□□□ -1.23
HMGN1P20-201ENST00000411849 CATSPERGQ6ZRH7 1159 aa7.37□□□□□ -1.23
HMGN1P20-201ENST00000411849 TBC1D9Q6ZT07 1266 aa7.37□□□□□ -1.23
HMGN1P20-201ENST00000411849 TRPV1Q8NER1 839 aa7.37□□□□□ -1.23
HMGN1P20-201ENST00000411849 TGFBRAP1Q8WUH2 860 aa7.37□□□□□ -1.23
HMGN1P20-201ENST00000411849 FAM122AQ96E09 287 aa7.37□□□□□ -1.23
HMGN1P20-201ENST00000411849 DNAJC18Q9H819 358 aa7.37□□□□□ -1.23
HMGN1P20-201ENST00000411849 AATFQ9NY61 560 aaKnown RBP eCLIP7.37□□□□□ -1.23
HMGN1P20-201ENST00000411849 TACC3Q9Y6A5 838 aa7.37□□□□□ -1.23
HMGN1P20-201ENST00000411849 HSFX4A0A1B0GTS1 333 aaPredicted RBP7.36□□□□□ -1.23
HMGN1P20-201ENST00000411849 HSFX3A0A1B0GWH4 333 aaPredicted RBP7.36□□□□□ -1.23
HMGN1P20-201ENST00000411849 TRIM43BA6NCK2 446 aa7.36□□□□□ -1.23
HMGN1P20-201ENST00000411849 GH2P01242 217 aa7.36□□□□□ -1.23
HMGN1P20-201ENST00000411849 IGHA2P01877 340 aa7.36□□□□□ -1.23
HMGN1P20-201ENST00000411849 CLTBP09497 229 aa7.36□□□□□ -1.23
HMGN1P20-201ENST00000411849 RAG1P15918 1043 aa7.36□□□□□ -1.23
HMGN1P20-201ENST00000411849 DNAJB2P25686 324 aa7.36□□□□□ -1.23
HMGN1P20-201ENST00000411849 ADCYAP1R1P41586 468 aa7.36□□□□□ -1.23
HMGN1P20-201ENST00000411849 PPP4CP60510 307 aa7.36□□□□□ -1.23
HMGN1P20-201ENST00000411849 TLE2Q04725 743 aa7.36□□□□□ -1.23
HMGN1P20-201ENST00000411849 FPGSQ05932 587 aa7.36□□□□□ -1.23
HMGN1P20-201ENST00000411849 ZYXQ15942 572 aaKnown RBP7.36□□□□□ -1.23
HMGN1P20-201ENST00000411849 ALDH1L2Q3SY69 923 aa7.36□□□□□ -1.23
HMGN1P20-201ENST00000411849 PI16Q6UXB8 463 aa7.36□□□□□ -1.23
HMGN1P20-201ENST00000411849 MAPKAPK5Q8IW41 473 aa7.36□□□□□ -1.23
HMGN1P20-201ENST00000411849 IL27Q8NEV9 243 aa7.36□□□□□ -1.23
HMGN1P20-201ENST00000411849 NPLOC4Q8TAT6 608 aa7.36□□□□□ -1.23
HMGN1P20-201ENST00000411849 ATXN2LQ8WWM7 1075 aaKnown RBP7.36□□□□□ -1.23
HMGN1P20-201ENST00000411849 TRIM43Q96BQ3 446 aaPredicted RBP7.36□□□□□ -1.23
HMGN1P20-201ENST00000411849 GAS2L1Q99501 681 aaPredicted RBP7.36□□□□□ -1.23
HMGN1P20-201ENST00000411849 KIAA1683Q9H0B3 1180 aa7.36□□□□□ -1.23
HMGN1P20-201ENST00000411849 ZNF576Q9H609 170 aa7.36□□□□□ -1.23
HMGN1P20-201ENST00000411849 PALD1Q9ULE6 856 aa7.36□□□□□ -1.23
HMGN1P20-201ENST00000411849 SPDYE16A6NNV3 312 aaPredicted RBP7.35□□□□□ -1.23
HMGN1P20-201ENST00000411849 KIAA0355O15063 1070 aa7.35□□□□□ -1.23
HMGN1P20-201ENST00000411849 SRGAP3O43295 1099 aa7.35□□□□□ -1.23
HMGN1P20-201ENST00000411849 VCAM1P19320 739 aa7.35□□□□□ -1.23
HMGN1P20-201ENST00000411849 ADORA2AP29274 412 aa7.35□□□□□ -1.23
HMGN1P20-201ENST00000411849 MCAMP43121 646 aa7.35□□□□□ -1.23
HMGN1P20-201ENST00000411849 GRIN2CQ14957 1233 aa7.35□□□□□ -1.23
HMGN1P20-201ENST00000411849 RAB3GAP1Q15042 981 aa7.35□□□□□ -1.23
HMGN1P20-201ENST00000411849 LRRC41Q15345 812 aa7.35□□□□□ -1.23
HMGN1P20-201ENST00000411849 SHROOM1Q2M3G4 852 aaPredicted RBP7.35□□□□□ -1.23
HMGN1P20-201ENST00000411849 AKNAD1Q5T1N1 836 aa7.35□□□□□ -1.23
HMGN1P20-201ENST00000411849 CCDC174Q6PII3 467 aa7.35□□□□□ -1.23
HMGN1P20-201ENST00000411849 SH3RF1Q7Z6J0 888 aa7.35□□□□□ -1.23
HMGN1P20-201ENST00000411849 CERS3Q8IU89 383 aa7.35□□□□□ -1.23
HMGN1P20-201ENST00000411849 SHCBP1Q8NEM2 672 aa7.35□□□□□ -1.23
HMGN1P20-201ENST00000411849 FERMT2Q96AC1 680 aa7.35□□□□□ -1.23
HMGN1P20-201ENST00000411849 MROH8Q9H579 483 aa7.35□□□□□ -1.23
HMGN1P20-201ENST00000411849 CABP5Q9NP86 173 aa7.35□□□□□ -1.23
HMGN1P20-201ENST00000411849 SMC4Q9NTJ3 1288 aa7.35□□□□□ -1.23
HMGN1P20-201ENST00000411849 HOXC10Q9NYD6 342 aa7.35□□□□□ -1.23
HMGN1P20-201ENST00000411849 BTBD7Q9P203 1132 aa7.35□□□□□ -1.23
HMGN1P20-201ENST00000411849 THEGQ9P2T0 379 aa7.35□□□□□ -1.23
HMGN1P20-201ENST00000411849 SAP30BPQ9UHR5 308 aaKnown RBP7.35□□□□□ -1.23
HMGN1P20-201ENST00000411849 NRBP1Q9UHY1 535 aa7.35□□□□□ -1.23
HMGN1P20-201ENST00000411849 PHF24Q9UPV7 400 aa7.35□□□□□ -1.23
HMGN1P20-201ENST00000411849 ZNF521Q96K83 1311 aa7.34□□□□□ -1.23
HMGN1P20-201ENST00000411849 MCM3APO60318 1980 aa7.34□□□□□ -1.23
HMGN1P20-201ENST00000411849 POTEB3A0JP26 581 aa7.34□□□□□ -1.23
HMGN1P20-201ENST00000411849 DCDC2CA8MYV0 355 aa7.34□□□□□ -1.23
HMGN1P20-201ENST00000411849 E9PSI1 815 aa7.34□□□□□ -1.23
HMGN1P20-201ENST00000411849 GNAI3P08754 354 aa7.34□□□□□ -1.23
HMGN1P20-201ENST00000411849 RARBP10826 455 aa7.34□□□□□ -1.23
HMGN1P20-201ENST00000411849 VASPP50552 380 aaPredicted RBP7.34□□□□□ -1.23
HMGN1P20-201ENST00000411849 MRPS5P82675 430 aaKnown RBP7.34□□□□□ -1.23
HMGN1P20-201ENST00000411849 MTX1Q13505 466 aa7.34□□□□□ -1.23
HMGN1P20-201ENST00000411849 COG2Q14746 738 aa7.34□□□□□ -1.23
HMGN1P20-201ENST00000411849 ABCB5Q2M3G0 1257 aa7.34□□□□□ -1.23
HMGN1P20-201ENST00000411849 CERKLQ49MI3 558 aaPredicted RBP7.34□□□□□ -1.23
HMGN1P20-201ENST00000411849 ANO1Q5XXA6 986 aa7.34□□□□□ -1.23
HMGN1P20-201ENST00000411849 TATDN1Q6P1N9 297 aa7.34□□□□□ -1.23
HMGN1P20-201ENST00000411849 POTEBQ6S5H4 581 aa7.34□□□□□ -1.23
HMGN1P20-201ENST00000411849 RNF180Q86T96 592 aa7.34□□□□□ -1.23
HMGN1P20-201ENST00000411849 ABRAQ8N0Z2 381 aa7.34□□□□□ -1.23
HMGN1P20-201ENST00000411849 MB21D1Q8N884 522 aa7.34□□□□□ -1.23
HMGN1P20-201ENST00000411849 USP38Q8NB14 1042 aa7.34□□□□□ -1.23
HMGN1P20-201ENST00000411849 ADAMTS19Q8TE59 1207 aa7.34□□□□□ -1.23
HMGN1P20-201ENST00000411849 TIFAQ96CG3 184 aa7.34□□□□□ -1.23
HMGN1P20-201ENST00000411849 ASB2Q96Q27 587 aa7.34□□□□□ -1.23
HMGN1P20-201ENST00000411849 MOV10L1Q9BXT6 1211 aaKnown RBP7.34□□□□□ -1.23
HMGN1P20-201ENST00000411849 API5Q9BZZ5 524 aaKnown RBP7.34□□□□□ -1.23
HMGN1P20-201ENST00000411849 EHD4Q9H223 541 aa7.34□□□□□ -1.23
HMGN1P20-201ENST00000411849 RPAP3Q9H6T3 665 aaPredicted RBP7.34□□□□□ -1.23
HMGN1P20-201ENST00000411849 XPNPEP3Q9NQH7 507 aa7.34□□□□□ -1.23
HMGN1P20-201ENST00000411849 TMEM39AQ9NV64 488 aa7.34□□□□□ -1.23
HMGN1P20-201ENST00000411849 SERPINB13Q9UIV8 391 aa7.34□□□□□ -1.23
HMGN1P20-201ENST00000411849 ROBO3Q96MS0 1386 aa7.33□□□□□ -1.24
HMGN1P20-201ENST00000411849 ANP32CO43423 234 aa7.33□□□□□ -1.24
HMGN1P20-201ENST00000411849 PQBP1O60828 265 aaKnown RBP7.33□□□□□ -1.24
HMGN1P20-201ENST00000411849 CHRM1P11229 460 aaPredicted RBP7.33□□□□□ -1.24
HMGN1P20-201ENST00000411849 USP5P45974 858 aa7.33□□□□□ -1.24
HMGN1P20-201ENST00000411849 EPHB4P54760 987 aa7.33□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms