RNA–Protein interactions for RNA: ENST00000411739.6

NEDD1-202, Transcript of neural precursor cell expressed, developmentally down-regulated 1, humanhuman

TSL 2 BASIC

Gene NEDD1, Length 2,490 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD1-202ENST00000411739 RAD50Q92878 1312 aa14.19□□□□□ -0.14
NEDD1-202ENST00000411739 ZKSCAN3Q9BRR0 538 aa14.19□□□□□ -0.14
NEDD1-202ENST00000411739 TANGO6Q9C0B7 1094 aa14.19□□□□□ -0.14
NEDD1-202ENST00000411739 VCPKMTQ9H867 229 aa14.19□□□□□ -0.14
NEDD1-202ENST00000411739 TXNRD2Q9NNW7 524 aa14.19□□□□□ -0.14
NEDD1-202ENST00000411739 PNMA3Q9UL41 463 aa14.19□□□□□ -0.14
NEDD1-202ENST00000411739 LACTBP83111 547 aaPredicted RBP14.18□□□□□ -0.14
NEDD1-202ENST00000411739 NOM1Q5C9Z4 860 aaKnown RBP14.18□□□□□ -0.14
NEDD1-202ENST00000411739 CATSPERGQ6ZRH7 1159 aa14.18□□□□□ -0.14
NEDD1-202ENST00000411739 CTU1Q7Z7A3 348 aaKnown RBP14.18□□□□□ -0.14
NEDD1-202ENST00000411739 PAGR1Q9BTK6 254 aa14.18□□□□□ -0.14
NEDD1-202ENST00000411739 USP17L15C9J2P7 530 aa14.18□□□□□ -0.14
NEDD1-202ENST00000411739 USP17L13C9JLJ4 530 aa14.18□□□□□ -0.14
NEDD1-202ENST00000411739 USP17L11C9JVI0 530 aa14.18□□□□□ -0.14
NEDD1-202ENST00000411739 USP17L18D6R9N7 530 aa14.18□□□□□ -0.14
NEDD1-202ENST00000411739 USP17L22D6RA61 530 aa14.18□□□□□ -0.14
NEDD1-202ENST00000411739 USP17L17D6RBQ6 530 aa14.18□□□□□ -0.14
NEDD1-202ENST00000411739 USP17L19D6RCP7 530 aa14.18□□□□□ -0.14
NEDD1-202ENST00000411739 USP17L20D6RJB6 530 aa14.18□□□□□ -0.14
NEDD1-202ENST00000411739 FGRP09769 529 aa14.18□□□□□ -0.14
NEDD1-202ENST00000411739 HERVK_113P62684 666 aa14.18□□□□□ -0.14
NEDD1-202ENST00000411739 USP17L24Q0WX57 530 aa14.18□□□□□ -0.14
NEDD1-202ENST00000411739 IMMTQ16891 758 aaKnown RBP14.18□□□□□ -0.14
NEDD1-202ENST00000411739 OTOP1Q7RTM1 612 aa14.18□□□□□ -0.14
NEDD1-202ENST00000411739 ERO1AQ96HE7 468 aa14.18□□□□□ -0.14
NEDD1-202ENST00000411739 STX8Q9UNK0 236 aa14.18□□□□□ -0.14
NEDD1-202ENST00000411739 ORC4O43929 436 aa14.17□□□□□ -0.14
NEDD1-202ENST00000411739 PSMC4P43686 418 aa14.17□□□□□ -0.14
NEDD1-202ENST00000411739 FAM83BQ5T0W9 1011 aa14.17□□□□□ -0.14
NEDD1-202ENST00000411739 RASGRP2Q7LDG7 609 aa14.17□□□□□ -0.14
NEDD1-202ENST00000411739 STAG1Q8WVM7 1258 aa14.17□□□□□ -0.14
NEDD1-202ENST00000411739 EFCC1Q9HA90 598 aa14.17□□□□□ -0.14
NEDD1-202ENST00000411739 FBXO28Q9NVF7 368 aa14.17□□□□□ -0.14
NEDD1-202ENST00000411739 NYAP2Q9P242 653 aa14.17□□□□□ -0.14
NEDD1-202ENST00000411739 CTNNA3Q9UI47 895 aa14.17□□□□□ -0.14
NEDD1-202ENST00000411739 B4E1Z4 1266 aa14.17□□□□□ -0.14
NEDD1-202ENST00000411739 F5H6K3 240 aa14.17□□□□□ -0.14
NEDD1-202ENST00000411739 CAPN15O75808 1086 aa14.17□□□□□ -0.14
NEDD1-202ENST00000411739 TTLL1O95922 423 aa14.17□□□□□ -0.14
NEDD1-202ENST00000411739 KLRC3Q07444 240 aa14.17□□□□□ -0.14
NEDD1-202ENST00000411739 Q3C1V9 767 aa14.17□□□□□ -0.14
NEDD1-202ENST00000411739 TRIM47Q96LD4 638 aa14.17□□□□□ -0.14
NEDD1-202ENST00000411739 SH2D4AQ9H788 454 aa14.17□□□□□ -0.14
NEDD1-202ENST00000411739 RBPJLQ9UBG7 517 aa14.17□□□□□ -0.14
NEDD1-202ENST00000411739 KDM4AO75164 1064 aa14.16□□□□□ -0.14
NEDD1-202ENST00000411739 FMNL1O95466 1100 aaPredicted RBP14.16□□□□□ -0.14
NEDD1-202ENST00000411739 CYP21A2P08686 494 aa14.16□□□□□ -0.14
NEDD1-202ENST00000411739 KIAA1211Q6ZU35 1233 aa14.16□□□□□ -0.14
NEDD1-202ENST00000411739 LSG1Q9H089 658 aaKnown RBP14.16□□□□□ -0.14
NEDD1-202ENST00000411739 ANO2Q9NQ90 1003 aa14.16□□□□□ -0.14
NEDD1-202ENST00000411739 RBM8AQ9Y5S9 174 aaKnown RBP14.16□□□□□ -0.14
NEDD1-202ENST00000411739 GREB1LQ9C091 1923 aaPredicted RBP14.16□□□□□ -0.14
NEDD1-202ENST00000411739 CDC45O75419 566 aa14.16□□□□□ -0.14
NEDD1-202ENST00000411739 FLOT1O75955 427 aa14.16□□□□□ -0.14
NEDD1-202ENST00000411739 NDUFB10O96000 172 aa14.16□□□□□ -0.14
NEDD1-202ENST00000411739 GOPCQ9HD26 462 aa14.16□□□□□ -0.14
NEDD1-202ENST00000411739 ISY1Q9ULR0 285 aaKnown RBP14.16□□□□□ -0.14
NEDD1-202ENST00000411739 KIF22Q14807 665 aa14.15□□□□□ -0.14
NEDD1-202ENST00000411739 MAP4K1Q92918 833 aa14.15□□□□□ -0.14
NEDD1-202ENST00000411739 U3KPZ7 1027 aaPredicted RBP14.15□□□□□ -0.14
NEDD1-202ENST00000411739 SPDYE16A6NNV3 312 aaPredicted RBP14.15□□□□□ -0.14
NEDD1-202ENST00000411739 RNF41Q9H4P4 317 aaPredicted RBP14.15□□□□□ -0.14
NEDD1-202ENST00000411739 BTBD7Q9P203 1132 aa14.15□□□□□ -0.14
NEDD1-202ENST00000411739 PLIN4Q96Q06 1357 aa14.14□□□□□ -0.15
NEDD1-202ENST00000411739 CNMDO75829 334 aa14.14□□□□□ -0.15
NEDD1-202ENST00000411739 GCLCP48506 637 aaPredicted RBP14.14□□□□□ -0.15
NEDD1-202ENST00000411739 COG2Q14746 738 aa14.14□□□□□ -0.15
NEDD1-202ENST00000411739 LPAR1Q92633 364 aa14.14□□□□□ -0.15
NEDD1-202ENST00000411739 MKL1Q969V6 931 aa14.14□□□□□ -0.15
NEDD1-202ENST00000411739 ATG4CQ96DT6 458 aa14.14□□□□□ -0.15
NEDD1-202ENST00000411739 ZSWIM5Q9P217 1185 aa14.14□□□□□ -0.15
NEDD1-202ENST00000411739 CENPFP49454 3210 aa14.14□□□□□ -0.15
NEDD1-202ENST00000411739 MCCP23508 829 aa14.14□□□□□ -0.15
NEDD1-202ENST00000411739 FAM110CQ1W6H9 321 aa14.14□□□□□ -0.15
NEDD1-202ENST00000411739 SLFN13Q68D06 897 aa14.14□□□□□ -0.15
NEDD1-202ENST00000411739 STOX1Q6ZVD7 989 aa14.14□□□□□ -0.15
NEDD1-202ENST00000411739 ESR2Q92731 530 aa14.14□□□□□ -0.15
NEDD1-202ENST00000411739 ABHD8Q96I13 439 aa14.14□□□□□ -0.15
NEDD1-202ENST00000411739 WDR46O15213 610 aaKnown RBP14.13□□□□□ -0.15
NEDD1-202ENST00000411739 COL9A3Q14050 684 aaPredicted RBP14.13□□□□□ -0.15
NEDD1-202ENST00000411739 CHST3Q7LGC8 479 aa14.13□□□□□ -0.15
NEDD1-202ENST00000411739 GPRC5AQ8NFJ5 357 aa14.13□□□□□ -0.15
NEDD1-202ENST00000411739 PORCNQ9H237 461 aa14.13□□□□□ -0.15
NEDD1-202ENST00000411739 GABRQQ9UN88 632 aa14.13□□□□□ -0.15
NEDD1-202ENST00000411739 MYH4Q9Y623 1939 aa14.13□□□□□ -0.15
NEDD1-202ENST00000411739 MYCP01106 439 aaPredicted RBP14.13□□□□□ -0.15
NEDD1-202ENST00000411739 ERVK-9P63128 1117 aa14.13□□□□□ -0.15
NEDD1-202ENST00000411739 ERVK-24P63145 666 aa14.13□□□□□ -0.15
NEDD1-202ENST00000411739 CASC1Q6TDU7 716 aa14.13□□□□□ -0.15
NEDD1-202ENST00000411739 CYB5R4Q7L1T6 521 aa14.13□□□□□ -0.15
NEDD1-202ENST00000411739 TMEM47Q9BQJ4 181 aa14.13□□□□□ -0.15
NEDD1-202ENST00000411739 PTPN22Q9Y2R2 807 aa14.13□□□□□ -0.15
NEDD1-202ENST00000411739 PTCH2Q9Y6C5 1203 aa14.13□□□□□ -0.15
NEDD1-202ENST00000411739 HTTP42858 3142 aa14.12□□□□□ -0.15
NEDD1-202ENST00000411739 E7EWF7 191 aa14.12□□□□□ -0.15
NEDD1-202ENST00000411739 DSG3P32926 999 aa14.12□□□□□ -0.15
NEDD1-202ENST00000411739 FCGRTP55899 365 aa14.12□□□□□ -0.15
NEDD1-202ENST00000411739 PRKCZQ05513 592 aa14.12□□□□□ -0.15
NEDD1-202ENST00000411739 PLS1Q14651 629 aa14.12□□□□□ -0.15
NEDD1-202ENST00000411739 RCSD1Q6JBY9 416 aa14.12□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms