RNA–Protein interactions for RNA: ENST00000410299.1

RNU2-54P-201, Transcript of RNA, U2 small nuclear 54, pseudogene, humanhuman

BASIC

Gene RNU2-54P, Length 190 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU2-54P-201ENST00000410299 ITGAEP38570 1179 aa3.61□□□□□ -1.83
RNU2-54P-201ENST00000410299 EGR3Q06889 387 aa3.61□□□□□ -1.83
RNU2-54P-201ENST00000410299 PKN1Q16512 942 aa3.61□□□□□ -1.83
RNU2-54P-201ENST00000410299 CWF19L2Q2TBE0 894 aaKnown RBP3.61□□□□□ -1.83
RNU2-54P-201ENST00000410299 ZNF326Q5BKZ1 582 aaKnown RBP3.61□□□□□ -1.83
RNU2-54P-201ENST00000410299 ARSHQ5FYA8 562 aa3.61□□□□□ -1.83
RNU2-54P-201ENST00000410299 ABHD4Q8TB40 342 aa3.61□□□□□ -1.83
RNU2-54P-201ENST00000410299 ZNF296Q8WUU4 475 aaPredicted RBP3.61□□□□□ -1.83
RNU2-54P-201ENST00000410299 CCDC120Q96HB5 630 aa3.61□□□□□ -1.83
RNU2-54P-201ENST00000410299 FAM84AQ96KN4 292 aa3.61□□□□□ -1.83
RNU2-54P-201ENST00000410299 KCNQ5Q9NR82 932 aa3.61□□□□□ -1.83
RNU2-54P-201ENST00000410299 UBP1Q9NZI7 540 aa3.61□□□□□ -1.83
RNU2-54P-201ENST00000410299 DUSP13Q9UII6 198 aa3.61□□□□□ -1.83
RNU2-54P-201ENST00000410299 GGT7Q9UJ14 662 aa3.61□□□□□ -1.83
RNU2-54P-201ENST00000410299 SUPT16HQ9Y5B9 1047 aaKnown RBP3.61□□□□□ -1.83
RNU2-54P-201ENST00000410299 PCDHB14Q9Y5E9 798 aa3.61□□□□□ -1.83
RNU2-54P-201ENST00000410299 PCDHA11Q9Y5I1 949 aa3.61□□□□□ -1.83
RNU2-54P-201ENST00000410299 SHISA3A0PJX4 238 aa3.6□□□□□ -1.83
RNU2-54P-201ENST00000410299 UBOX5O94941 541 aa3.6□□□□□ -1.83
RNU2-54P-201ENST00000410299 RAC2P15153 192 aa3.6□□□□□ -1.83
RNU2-54P-201ENST00000410299 LTKP29376 864 aa3.6□□□□□ -1.83
RNU2-54P-201ENST00000410299 POLR2BP30876 1174 aaKnown RBP3.6□□□□□ -1.83
RNU2-54P-201ENST00000410299 GBP1P32455 592 aa3.6□□□□□ -1.83
RNU2-54P-201ENST00000410299 HS2ST1Q7LGA3 356 aa3.6□□□□□ -1.83
RNU2-54P-201ENST00000410299 MYLIPQ8WY64 445 aa3.6□□□□□ -1.83
RNU2-54P-201ENST00000410299 DIRC2Q96SL1 478 aa3.6□□□□□ -1.83
RNU2-54P-201ENST00000410299 SLC38A3Q99624 504 aa3.6□□□□□ -1.83
RNU2-54P-201ENST00000410299 ASPNQ9BXN1 380 aa3.6□□□□□ -1.83
RNU2-54P-201ENST00000410299 LRRC3Q9BY71 257 aa3.6□□□□□ -1.83
RNU2-54P-201ENST00000410299 C19orf44Q9H6X5 657 aa3.6□□□□□ -1.83
RNU2-54P-201ENST00000410299 ROBO2Q9HCK4 1378 aa3.6□□□□□ -1.83
RNU2-54P-201ENST00000410299 RBM47A0AV96 593 aaKnown RBP3.59□□□□□ -1.83
RNU2-54P-201ENST00000410299 DBX1A6NMT0 343 aa3.59□□□□□ -1.83
RNU2-54P-201ENST00000410299 RGS13O14921 159 aa3.59□□□□□ -1.83
RNU2-54P-201ENST00000410299 HPXP02790 462 aa3.59□□□□□ -1.83
RNU2-54P-201ENST00000410299 ZGLP1P0C6A0 271 aa3.59□□□□□ -1.83
RNU2-54P-201ENST00000410299 RAG1P15918 1043 aa3.59□□□□□ -1.83
RNU2-54P-201ENST00000410299 CLCQ05315 142 aa3.59□□□□□ -1.83
RNU2-54P-201ENST00000410299 MLECQ14165 292 aa3.59□□□□□ -1.83
RNU2-54P-201ENST00000410299 SEZ6Q53EL9 994 aa3.59□□□□□ -1.83
RNU2-54P-201ENST00000410299 TIGD5Q53EQ6 642 aa3.59□□□□□ -1.83
RNU2-54P-201ENST00000410299 FBLN7Q53RD9 439 aa3.59□□□□□ -1.83
RNU2-54P-201ENST00000410299 LDLRAD1Q5T700 205 aa3.59□□□□□ -1.83
RNU2-54P-201ENST00000410299 LCE4AQ5TA78 99 aa3.59□□□□□ -1.83
RNU2-54P-201ENST00000410299 OVOS1Q6IE37 1185 aa3.59□□□□□ -1.83
RNU2-54P-201ENST00000410299 GK5Q6ZS86 529 aa3.59□□□□□ -1.83
RNU2-54P-201ENST00000410299 SYDE1Q6ZW31 735 aaPredicted RBP3.59□□□□□ -1.83
RNU2-54P-201ENST00000410299 VWCEQ96DN2 955 aa3.59□□□□□ -1.83
RNU2-54P-201ENST00000410299 NSUN3Q9H649 340 aaKnown RBP3.59□□□□□ -1.83
RNU2-54P-201ENST00000410299 ANTXR1Q9H6X2 564 aa3.59□□□□□ -1.83
RNU2-54P-201ENST00000410299 SP110Q9HB58 689 aa3.59□□□□□ -1.83
RNU2-54P-201ENST00000410299 GMIPQ9P107 970 aa3.59□□□□□ -1.83
RNU2-54P-201ENST00000410299 EBF1Q9UH73 591 aa3.59□□□□□ -1.83
RNU2-54P-201ENST00000410299 ATE1O95260 518 aa3.58□□□□□ -1.84
RNU2-54P-201ENST00000410299 ZNF16P17020 682 aaPredicted RBP3.58□□□□□ -1.84
RNU2-54P-201ENST00000410299 CHMP4BP1P59074 171 aa3.58□□□□□ -1.84
RNU2-54P-201ENST00000410299 TEKQ02763 1124 aa3.58□□□□□ -1.84
RNU2-54P-201ENST00000410299 APOBRQ0VD83 1088 aa3.58□□□□□ -1.84
RNU2-54P-201ENST00000410299 NMIQ13287 307 aaPredicted RBP3.58□□□□□ -1.84
RNU2-54P-201ENST00000410299 CLEC16AQ2KHT3 1053 aa3.58□□□□□ -1.84
RNU2-54P-201ENST00000410299 TMCO4Q5TGY1 634 aa3.58□□□□□ -1.84
RNU2-54P-201ENST00000410299 TMEM87AQ8NBN3 555 aa3.58□□□□□ -1.84
RNU2-54P-201ENST00000410299 ATG4CQ96DT6 458 aa3.58□□□□□ -1.84
RNU2-54P-201ENST00000410299 RNF32Q9H0A6 362 aa3.58□□□□□ -1.84
RNU2-54P-201ENST00000410299 EHMT1Q9H9B1 1298 aa3.58□□□□□ -1.84
RNU2-54P-201ENST00000410299 KRT1P04264 644 aa3.57□□□□□ -1.84
RNU2-54P-201ENST00000410299 MCM4P33991 863 aa3.57□□□□□ -1.84
RNU2-54P-201ENST00000410299 RAP1GAPP47736 663 aa3.57□□□□□ -1.84
RNU2-54P-201ENST00000410299 SNW1Q13573 536 aaKnown RBP3.57□□□□□ -1.84
RNU2-54P-201ENST00000410299 NBPF9Q3BBW0 867 aa3.57□□□□□ -1.84
RNU2-54P-201ENST00000410299 NBPF12Q5TAG4 269 aaPredicted RBP3.57□□□□□ -1.84
RNU2-54P-201ENST00000410299 CDCP2Q5VXM1 449 aa3.57□□□□□ -1.84
RNU2-54P-201ENST00000410299 NLRC3Q7RTR2 1065 aa3.57□□□□□ -1.84
RNU2-54P-201ENST00000410299 TMC3Q7Z5M5 1100 aa3.57□□□□□ -1.84
RNU2-54P-201ENST00000410299 CILP2Q8IUL8 1156 aa3.57□□□□□ -1.84
RNU2-54P-201ENST00000410299 FBXO15Q8NCQ5 510 aaPredicted RBP3.57□□□□□ -1.84
RNU2-54P-201ENST00000410299 PDZD8Q8NEN9 1154 aa3.57□□□□□ -1.84
RNU2-54P-201ENST00000410299 NKD1Q969G9 470 aa3.57□□□□□ -1.84
RNU2-54P-201ENST00000410299 EAF1Q96JC9 268 aaPredicted RBP3.57□□□□□ -1.84
RNU2-54P-201ENST00000410299 ZNF512BQ96KM6 892 aaPredicted RBP3.57□□□□□ -1.84
RNU2-54P-201ENST00000410299 ASCC2Q9H1I8 757 aaPredicted RBP3.57□□□□□ -1.84
RNU2-54P-201ENST00000410299 CNNM2Q9H8M5 875 aa3.57□□□□□ -1.84
RNU2-54P-201ENST00000410299 DCP1AQ9NPI6 582 aaPredicted RBP3.57□□□□□ -1.84
RNU2-54P-201ENST00000410299 CLEC3AO75596 197 aa3.56□□□□□ -1.84
RNU2-54P-201ENST00000410299 TSPAN15O95858 294 aa3.56□□□□□ -1.84
RNU2-54P-201ENST00000410299 C1QTNF9P0C862 333 aa3.56□□□□□ -1.84
RNU2-54P-201ENST00000410299 RPL10P27635 214 aaKnown RBP3.56□□□□□ -1.84
RNU2-54P-201ENST00000410299 GALK1P51570 392 aa3.56□□□□□ -1.84
RNU2-54P-201ENST00000410299 RNF4P78317 190 aa3.56□□□□□ -1.84
RNU2-54P-201ENST00000410299 KIAA0825Q8IV33 1275 aa3.56□□□□□ -1.84
RNU2-54P-201ENST00000410299 REXO1Q8N1G1 1221 aaKnown RBP3.56□□□□□ -1.84
RNU2-54P-201ENST00000410299 OXR1Q8N573 874 aa3.56□□□□□ -1.84
RNU2-54P-201ENST00000410299 USHBP1Q8N6Y0 703 aa3.56□□□□□ -1.84
RNU2-54P-201ENST00000410299 BHLHE22Q8NFJ8 381 aaPredicted RBP3.56□□□□□ -1.84
RNU2-54P-201ENST00000410299 SYTL5Q8TDW5 730 aaPredicted RBP3.56□□□□□ -1.84
RNU2-54P-201ENST00000410299 DHX38Q92620 1227 aaKnown RBP3.56□□□□□ -1.84
RNU2-54P-201ENST00000410299 SYTL4Q96C24 671 aaPredicted RBP3.56□□□□□ -1.84
RNU2-54P-201ENST00000410299 TCTN2Q96GX1 697 aa3.56□□□□□ -1.84
RNU2-54P-201ENST00000410299 SPON2Q9BUD6 331 aa3.56□□□□□ -1.84
RNU2-54P-201ENST00000410299 G6PC3Q9BUM1 346 aa3.56□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms